RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 TMEM256-PLSCR3K7ERE1 68 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 GPR31O00270 319 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 GGCTO75223 188 aaKnown RBP2.17□□□□□ -2.06
PSEN1-211ENST00000554995 SULT1C4O75897 302 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 TNFP01375 233 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 BAALC-AS2P0C853 105 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 FAM24BQ8N5W8 94 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 SLC30A7Q8NEW0 376 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 OR9Q1Q8NGQ5 310 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 TEX47Q8TBZ9 253 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 CCDC32Q9BV29 185 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 FAIMQ9NVQ4 179 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 LSM2Q9Y333 95 aaKnown RBP2.17□□□□□ -2.06
PSEN1-211ENST00000554995 FREM3P0C091 2139 aa2.17□□□□□ -2.06
PSEN1-211ENST00000554995 FN1P02751 2386 aaKnown RBP2.16□□□□□ -2.06
PSEN1-211ENST00000554995 PTPRBP23467 1997 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 SDK1Q7Z5N4 2213 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 A0A1B0GV72 72 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 TLCD2A6NGC4 264 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 ZNF670-ZNF695F2Z2N8 137 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 NDUFB3O43676 98 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 PFDN1O60925 122 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 UBL3O95164 117 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 INSL3P51460 131 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 SPCS2Q15005 226 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 ESRGQ1W209 222 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 RPS19BP1Q86WX3 136 aaKnown RBP2.16□□□□□ -2.06
PSEN1-211ENST00000554995 GKN2Q86XP6 184 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 PLEKHB2Q96CS7 222 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 SDF2Q99470 211 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 CMC2Q9NRP2 79 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 ICE1Q9Y2F5 2266 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 EML6Q6ZMW3 1958 aa2.16□□□□□ -2.06
PSEN1-211ENST00000554995 CSMD1Q96PZ7 3565 aa2.15□□□□□ -2.06
PSEN1-211ENST00000554995 KIAA2026Q5HYC2 2103 aa2.15□□□□□ -2.06
PSEN1-211ENST00000554995 ALPK2Q86TB3 2170 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 MTORP42345 2549 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 NCOA6Q14686 2063 aaPredicted RBP2.15□□□□□ -2.07
PSEN1-211ENST00000554995 TRDV1A0A1B0GX56 115 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 H0YGG7 62 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 IFNGP01579 166 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 TSPAN19P0C672 248 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 TRAPPC2P0DI81 140 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 TRAPPC2BP0DI82 140 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 NCS1P62166 190 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 LTC4SQ16873 150 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 LINC00311Q8N616 119 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 ACBD7Q8N6N7 88 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 NUP35Q8NFH5 326 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 OR5D16Q8NGK9 328 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 GPX7Q96SL4 187 aaPredicted RBP2.15□□□□□ -2.07
PSEN1-211ENST00000554995 MED31Q9Y3C7 131 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 KNTC1P50748 2209 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 MED13LQ71F56 2210 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 MYO7BQ6PIF6 2116 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 ATRQ13535 2644 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 ANKHD1Q8IWZ3 2542 aaKnown RBP2.15□□□□□ -2.07
PSEN1-211ENST00000554995 DOCK10Q96BY6 2186 aa2.15□□□□□ -2.07
PSEN1-211ENST00000554995 TRAV14DV4A0A0A6YYC5 116 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 TRAV1-2A0A0B4J238 106 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 A0A1B0GWA3 101 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 MAP1LC3B2A6NCE7 125 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 TIMM17BO60830 172 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 TRGC2P03986 189 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 CRHP06850 196 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 SDC2P34741 201 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 DYNLT3P51808 116 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 PPP3R1P63098 170 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 MRPS10P82664 201 aaKnown RBP2.14□□□□□ -2.07
PSEN1-211ENST00000554995 RHOGP84095 191 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 CCDC58Q4VC31 144 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 HSD17B12Q53GQ0 312 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 SMIM15Q7Z3B0 74 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 TSTD1Q8NFU3 115 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 OR4C6Q8NH72 309 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 ZNF563Q8TA94 476 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 MAP1LC3BQ9GZQ8 125 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 PKD1L1Q8TDX9 2849 aa2.14□□□□□ -2.07
PSEN1-211ENST00000554995 APCP25054 2843 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 IGLV3-32A0A0A0MS00 114 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 C2orf70A6NJV1 201 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 CPSF4LA6NMK7 179 aaKnown RBP2.13□□□□□ -2.07
PSEN1-211ENST00000554995 CDC42EP2O14613 210 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 SNAPC5O75971 98 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 IFNA21P01568 189 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 FXYD6P3P58550 94 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 TMEM78Q5T7P6 136 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 Q8IYB0 196 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.13□□□□□ -2.07
PSEN1-211ENST00000554995 PLPP5Q8NEB5 264 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 CCL4L1Q8NHW4 92 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 ZNF418Q8TF45 676 aaPredicted RBP2.13□□□□□ -2.07
PSEN1-211ENST00000554995 SLC25A21Q9BQT8 299 aaPredicted RBP2.13□□□□□ -2.07
PSEN1-211ENST00000554995 WFDC6Q9BQY6 131 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 NPCDR1Q9BY65 106 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 C6orf62Q9GZU0 229 aaPredicted RBP2.13□□□□□ -2.07
PSEN1-211ENST00000554995 OR5AC2Q9NZP5 309 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 ABRACLQ9P1F3 81 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 COPZ2Q9P299 210 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms