RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 LOC110117498A0A087WWA1 95 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 TEX49A0A1B0GTD5 131 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 PVALEFA0A1B0GWK0 134 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 CRYM-AS1A6NIL9 109 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 MT-ATP8P03928 68 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 KRTAP12-1P59990 96 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 KRTDAPP60985 99 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 CCL8P80075 99 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 SSBP1Q04837 148 aaKnown RBP0.99□□□□□ -2.25
SRP54-204ENST00000553923 PMCHL2Q9BQD1 86 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 MANBALQ9NQG1 85 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 LINC00474Q9P2X8 69 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 SCP2D1Q9UJQ7 156 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 V9GYS6 101 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 WDR97A6NE52 1622 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 SHROOM3Q8TF72 1996 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 MAPKBP1O60336 1514 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 ZFYVE16Q7Z3T8 1539 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 IFT140Q96RY7 1462 aa0.99□□□□□ -2.25
SRP54-204ENST00000553923 CDK12Q9NYV4 1490 aaPredicted RBP0.99□□□□□ -2.25
SRP54-204ENST00000553923 ZNF609O15014 1411 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 COL4A5P29400 1685 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 CUL7Q14999 1698 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 TANC2Q9HCD6 1990 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 HELZP42694 1942 aaKnown RBP0.98□□□□□ -2.25
SRP54-204ENST00000553923 A0A1W2PPM0 123 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 NAP1L6A6NFF2 107 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 SIX6O95475 246 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 UBE2D1P51668 147 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 FXYD3Q14802 87 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 ZNF56Q15929 161 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 FAM74A4Q5TZK3 123 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 XAF1Q6GPH4 301 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 UNQ6190/PRO20217Q6UXQ8 127 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 ZNF818PQ6ZRF7 136 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 LINC00208Q96KT6 92 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 AMELYQ99218 206 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 BET1LQ9NYM9 111 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 NRKQ7Z2Y5 1582 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 PTPRMP28827 1452 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 C10orf71Q711Q0 1435 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 SCAPERQ9BY12 1400 aa0.98□□□□□ -2.25
SRP54-204ENST00000553923 LTBP2Q14767 1821 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 hADV29S1A0JD25 119 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 H3BQ15 152 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 NCR3O14931 201 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 PPP1R17O96001 155 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 FAUP35544 74 aaKnown RBP0.97□□□□□ -2.25
SRP54-204ENST00000553923 SEC11AP67812 179 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 PCOTHQ58A44 107 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 SFTA2Q6UW10 78 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 Q6ZQY7 126 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 C5orf56Q8N8D9 126 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 FAM213BQ8TBF2 198 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 COX7B2Q8TF08 81 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 PPP1R1CQ8WVI7 109 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 CCL19Q99731 98 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 CYP4F30PQ9H0H9 118 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 PRO1933Q9H354 126 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 CASZ1Q86V15 1759 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 ZFC3H1O60293 1989 aaKnown RBP0.97□□□□□ -2.25
SRP54-204ENST00000553923 MYLKQ15746 1914 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 CASKIN1Q8WXD9 1431 aa0.97□□□□□ -2.25
SRP54-204ENST00000553923 MYH1P12882 1939 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 TRBV7-3A0A075B6L6 115 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 TRBV7-1A0A0A6YYK4 115 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 NBDYA0A0U1RRE5 68 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 CHKB-CPT1BH3BT56 60 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 CAV3P56539 151 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 UQCR10Q9UDW1 63 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 V9GYV3 84 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 GOLGA3Q08378 1498 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 QRICH2Q9H0J4 1663 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 NSD3Q9BZ95 1437 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 ZFHX2Q9C0A1 2572 aaPredicted RBP0.96□□□□□ -2.26
SRP54-204ENST00000553923 SDK2Q58EX2 2172 aa0.96□□□□□ -2.26
SRP54-204ENST00000553923 KIAA2026Q5HYC2 2103 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 MYH7P12883 1935 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 ARHGAP5Q13017 1502 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 TRBV30A0A0K0K1B3 111 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 TRAPPC2P0DI81 140 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 TRAPPC2BP0DI82 140 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 CCL3L1P16619 93 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 EDDM3BP56851 147 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 ELOF1P60002 83 aaKnown RBP0.95□□□□□ -2.26
SRP54-204ENST00000553923 SPAG11BQ08648 103 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 Q0VG73 95 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 SPAG11AQ6PDA7 123 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 MGST2Q99735 147 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 PPIP5K1Q6PFW1 1433 aa0.95□□□□□ -2.26
SRP54-204ENST00000553923 MICAL3Q7RTP6 2002 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 FANCMQ8IYD8 2048 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 KIAA1549LQ6ZVL6 1849 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 LAMB2P55268 1798 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 HEATR5BQ9P2D3 2071 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.94□□□□□ -2.26
SRP54-204ENST00000553923 A0A0G2JND7 137 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 CTXND1A0A1B0GTU2 59 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 ATOX1O00244 68 aa0.94□□□□□ -2.26
SRP54-204ENST00000553923 APOC3P02656 99 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms