RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ORMDL3Q8N138 153 aa9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 ZNF256Q9Y2P7 627 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 U3KQK5 164 aa9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 NDUFA7O95182 113 aa9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 CD7P09564 240 aa9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 C3orf79P0CE67 100 aa9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 SIGLEC8Q9NYZ4 499 aa9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 LEPP41159 167 aa9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 FAM159AQ6UWV7 190 aa9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 Q8N976 141 aa9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 JPT2Q9H910 190 aa9.42□□□□□ -0.9
VIPAS39-206ENST00000553888 ZNF705AQ6ZN79 300 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-206ENST00000553888 SPATA12Q7Z6I5 190 aa9.41□□□□□ -0.9
VIPAS39-206ENST00000553888 MDFICQ9P1T7 246 aa9.41□□□□□ -0.9
VIPAS39-206ENST00000553888 PHLDA3Q9Y5J5 127 aa9.41□□□□□ -0.9
VIPAS39-206ENST00000553888 H3BMM0 161 aa9.41□□□□□ -0.9
VIPAS39-206ENST00000553888 HTN1P15515 57 aa9.41□□□□□ -0.9
VIPAS39-206ENST00000553888 PRSS3P2Q8NHM4 247 aa9.41□□□□□ -0.9
VIPAS39-206ENST00000553888 MCRIP2Q9BUT9 160 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-206ENST00000553888 TEP1Q99973 2627 aaKnown RBP9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 ATRQ13535 2644 aa9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 TSPAN13O95857 204 aa9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 ODF3L2Q3SX64 289 aa9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 C14orf178Q8N769 122 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 JMJD8Q96S16 334 aa9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 CRXO43186 299 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 WIPF1O43516 503 aa9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 HLA-DRB4P13762 266 aa9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 SMAGPQ0VAQ4 97 aa9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 HLA-DRB4X5D2U9 266 aa9.4□□□□□ -0.9
VIPAS39-206ENST00000553888 TRRAPQ9Y4A5 3859 aa9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 DUSP14O95147 198 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 Q8N1Y9 231 aa9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 SPATA3Q8NHX4 192 aa9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 SCRT2Q9NQ03 307 aa9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 IGHV4-4A0A075B6R2 117 aa9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 COL5A1-AS1Q5SY13 56 aa9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 ATOH7Q8N100 152 aa9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 ODF3Q96PU9 254 aa9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 WFDC10AQ9H1F0 79 aa9.39□□□□□ -0.91
VIPAS39-206ENST00000553888 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
VIPAS39-206ENST00000553888 CACNG7P62955 275 aa9.38□□□□□ -0.91
VIPAS39-206ENST00000553888 SPAG8Q99932 426 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-206ENST00000553888 AP5S1Q9NUS5 200 aa9.38□□□□□ -0.91
VIPAS39-206ENST00000553888 A0A096LNJ9 63 aa9.38□□□□□ -0.91
VIPAS39-206ENST00000553888 SEC61GP60059 68 aa9.38□□□□□ -0.91
VIPAS39-206ENST00000553888 IGHV3-16A0A0C4DH30 117 aa9.37□□□□□ -0.91
VIPAS39-206ENST00000553888 OR4C46A6NHA9 309 aa9.37□□□□□ -0.91
VIPAS39-206ENST00000553888 PF4P02776 101 aa9.37□□□□□ -0.91
VIPAS39-206ENST00000553888 MGPP08493 103 aa9.37□□□□□ -0.91
VIPAS39-206ENST00000553888 ORAOV1Q8WV07 137 aa9.37□□□□□ -0.91
VIPAS39-206ENST00000553888 IGHV1OR15-1A0A075B7D0 117 aa9.37□□□□□ -0.91
VIPAS39-206ENST00000553888 SCGB1A1P11684 91 aa9.37□□□□□ -0.91
VIPAS39-206ENST00000553888 BAHCC1Q9P281 2608 aa9.37□□□□□ -0.91
VIPAS39-206ENST00000553888 A0A087WWL8 130 aa9.36□□□□□ -0.91
VIPAS39-206ENST00000553888 TRAV2A0A0B4J234 112 aa9.36□□□□□ -0.91
VIPAS39-206ENST00000553888 CRLF1O75462 422 aa9.36□□□□□ -0.91
VIPAS39-206ENST00000553888 TSPOP30536 169 aa9.36□□□□□ -0.91
VIPAS39-206ENST00000553888 LEPROTL1O95214 131 aa9.36□□□□□ -0.91
VIPAS39-206ENST00000553888 AZU1P20160 251 aa9.36□□□□□ -0.91
VIPAS39-206ENST00000553888 Q6ZVH6 145 aa9.36□□□□□ -0.91
VIPAS39-206ENST00000553888 NRACQ8N912 160 aa9.36□□□□□ -0.91
VIPAS39-206ENST00000553888 RPL39LQ96EH5 51 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-206ENST00000553888 CYSRT1A8MQ03 144 aa9.35□□□□□ -0.91
VIPAS39-206ENST00000553888 DEFB104AQ8WTQ1 72 aa9.35□□□□□ -0.91
VIPAS39-206ENST00000553888 PAM16Q9Y3D7 125 aa9.35□□□□□ -0.91
VIPAS39-206ENST00000553888 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.35□□□□□ -0.91
VIPAS39-206ENST00000553888 OR2K2Q8NGT1 345 aa9.35□□□□□ -0.91
VIPAS39-206ENST00000553888 PMCHL2Q9BQD1 86 aa9.35□□□□□ -0.91
VIPAS39-206ENST00000553888 GTSF1LQ9H1H1 148 aa9.35□□□□□ -0.91
VIPAS39-206ENST00000553888 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
VIPAS39-206ENST00000553888 A8MTW9 85 aa9.34□□□□□ -0.91
VIPAS39-206ENST00000553888 TEX43Q6ZNM6 134 aa9.34□□□□□ -0.91
VIPAS39-206ENST00000553888 MAP1LC3AQ9H492 121 aa9.34□□□□□ -0.91
VIPAS39-206ENST00000553888 NACAE9PAV3 2078 aa9.34□□□□□ -0.91
VIPAS39-206ENST00000553888 MED14OSP0DP75 135 aa9.34□□□□□ -0.91
VIPAS39-206ENST00000553888 C9orf85Q96MD7 179 aa9.34□□□□□ -0.91
VIPAS39-206ENST00000553888 PPDPFQ9H3Y8 114 aa9.34□□□□□ -0.91
VIPAS39-206ENST00000553888 DPH3P1Q9H4G8 78 aa9.34□□□□□ -0.91
VIPAS39-206ENST00000553888 FAM74A4Q5TZK3 123 aa9.33□□□□□ -0.92
VIPAS39-206ENST00000553888 OR11H12B2RN74 326 aa9.33□□□□□ -0.92
VIPAS39-206ENST00000553888 NXPH4O95158 308 aa9.33□□□□□ -0.92
VIPAS39-206ENST00000553888 IGLV1-51P01701 117 aa9.33□□□□□ -0.92
VIPAS39-206ENST00000553888 NDUFA11Q86Y39 141 aa9.33□□□□□ -0.92
VIPAS39-206ENST00000553888 OR11H2Q8NH07 326 aa9.33□□□□□ -0.92
VIPAS39-206ENST00000553888 RASL10AQ92737 203 aa9.33□□□□□ -0.92
VIPAS39-206ENST00000553888 AP1S3Q96PC3 154 aa9.33□□□□□ -0.92
VIPAS39-206ENST00000553888 KIF25-AS1Q9Y6Z4 181 aa9.33□□□□□ -0.92
VIPAS39-206ENST00000553888 LINC00315P59091 139 aa9.32□□□□□ -0.92
VIPAS39-206ENST00000553888 IGHV3OR16-12A0A075B7B8 117 aa9.32□□□□□ -0.92
VIPAS39-206ENST00000553888 STHQ8IWL8 128 aa9.32□□□□□ -0.92
VIPAS39-206ENST00000553888 PTH2Q96A98 100 aa9.32□□□□□ -0.92
VIPAS39-206ENST00000553888 TMEM70Q9BUB7 260 aa9.32□□□□□ -0.92
VIPAS39-206ENST00000553888 IGLV2-18A0A075B6J9 118 aa9.32□□□□□ -0.92
VIPAS39-206ENST00000553888 SYS1-DBNDD2H3BUS1 97 aa9.32□□□□□ -0.92
VIPAS39-206ENST00000553888 NEGR1Q7Z3B1 354 aa9.32□□□□□ -0.92
VIPAS39-206ENST00000553888 C18orf15Q96N68 181 aa9.31□□□□□ -0.92
VIPAS39-206ENST00000553888 ZNF747Q9BV97 191 aa9.31□□□□□ -0.92
VIPAS39-206ENST00000553888 MRPL52Q86TS9 123 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms