RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 CRYGDP07320 174 aa8.18□□□□□ -1.1
TMEM253-202ENST00000553744 FAM74A4Q5TZK3 123 aa8.18□□□□□ -1.1
TMEM253-202ENST00000553744 SPANXN1Q5VSR9 72 aa8.18□□□□□ -1.1
TMEM253-202ENST00000553744 Q6ZR54 194 aa8.18□□□□□ -1.1
TMEM253-202ENST00000553744 Q6ZSN1 163 aa8.18□□□□□ -1.1
TMEM253-202ENST00000553744 FER1L6-AS1Q8NA97 138 aa8.18□□□□□ -1.1
TMEM253-202ENST00000553744 MUC21A0A0G2JKD1 596 aa8.17□□□□□ -1.1
TMEM253-202ENST00000553744 MUC21A0A140T8X8 626 aa8.17□□□□□ -1.1
TMEM253-202ENST00000553744 ZNF727A8MUV8 499 aa8.17□□□□□ -1.1
TMEM253-202ENST00000553744 LYPD5Q6UWN5 251 aa8.17□□□□□ -1.1
TMEM253-202ENST00000553744 SH2D6Q7Z4S9 175 aa8.17□□□□□ -1.1
TMEM253-202ENST00000553744 TPPP3Q9BW30 176 aa8.17□□□□□ -1.1
TMEM253-202ENST00000553744 RPP21Q9H633 154 aaKnown RBP8.17□□□□□ -1.1
TMEM253-202ENST00000553744 Q9H8V8 135 aa8.17□□□□□ -1.1
TMEM253-202ENST00000553744 DNAH10Q8IVF4 4471 aa8.17□□□□□ -1.1
TMEM253-202ENST00000553744 DNAH2Q9P225 4427 aa8.17□□□□□ -1.1
TMEM253-202ENST00000553744 NBDYA0A0U1RRE5 68 aa8.16□□□□□ -1.1
TMEM253-202ENST00000553744 A0A1W2PPQ1 181 aa8.16□□□□□ -1.1
TMEM253-202ENST00000553744 C9JQL5 133 aa8.16□□□□□ -1.1
TMEM253-202ENST00000553744 SRSF3P84103 164 aaKnown RBP8.16□□□□□ -1.1
TMEM253-202ENST00000553744 PEA15Q15121 130 aa8.16□□□□□ -1.1
TMEM253-202ENST00000553744 FAM231DQ6ZW35 169 aa8.16□□□□□ -1.1
TMEM253-202ENST00000553744 LINC01551Q86U37 167 aa8.16□□□□□ -1.1
TMEM253-202ENST00000553744 C14orf178Q8N769 122 aaPredicted RBP8.16□□□□□ -1.1
TMEM253-202ENST00000553744 AP1S3Q96PC3 154 aa8.16□□□□□ -1.1
TMEM253-202ENST00000553744 SMDT1Q9H4I9 107 aa8.16□□□□□ -1.1
TMEM253-202ENST00000553744 F2Z2F3 143 aa8.15□□□□□ -1.1
TMEM253-202ENST00000553744 LINC00694P0DN24 101 aa8.15□□□□□ -1.1
TMEM253-202ENST00000553744 CTRLP40313 264 aa8.15□□□□□ -1.1
TMEM253-202ENST00000553744 TIRAPP58753 221 aa8.15□□□□□ -1.1
TMEM253-202ENST00000553744 RAB14P61106 215 aa8.15□□□□□ -1.1
TMEM253-202ENST00000553744 SSTP61278 116 aa8.15□□□□□ -1.1
TMEM253-202ENST00000553744 CACNG7P62955 275 aa8.15□□□□□ -1.1
TMEM253-202ENST00000553744 FAM74A3Q4VXF1 159 aa8.15□□□□□ -1.1
TMEM253-202ENST00000553744 GATCO43716 136 aaKnown RBP8.14□□□□□ -1.11
TMEM253-202ENST00000553744 ERVFC1-1P60608 527 aa8.14□□□□□ -1.11
TMEM253-202ENST00000553744 TTC32Q5I0X7 151 aa8.14□□□□□ -1.11
TMEM253-202ENST00000553744 LYZL1Q6UWQ5 148 aa8.14□□□□□ -1.11
TMEM253-202ENST00000553744 GAGE12JA6NER3 117 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 SIVA1O15304 175 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 SMIM17P0DL12 118 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 RAB4BP61018 213 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 GAGE1Q13065 139 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 GAGE4Q13068 117 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 GAGE5Q13069 117 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 ZNF56Q15929 161 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 GAGE13Q4V321 117 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 CT83Q5H943 113 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 ATP6V0E2Q8NHE4 81 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 CNFNQ9BYD5 112 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 Q9UF83 564 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 KIF25-AS1Q9Y6Z4 181 aa8.13□□□□□ -1.11
TMEM253-202ENST00000553744 TRBV10-1A0A0K0K1A3 114 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 A8MWL6 223 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 RTL8CO15255 209 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 IFITM2Q01629 132 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 TMEM241Q24JQ0 296 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 CLLU1Q5K131 121 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 C1orf134Q5TEV5 83 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 WDR73Q6P4I2 378 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 GTSF1Q8WW33 167 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 KRTAP1-5Q9BYS1 174 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 GTSF1LQ9H1H1 148 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 OSTCQ9NRP0 149 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 NAT8Q9UHE5 227 aa8.12□□□□□ -1.11
TMEM253-202ENST00000553744 TRGC1P0CF51 173 aa8.11□□□□□ -1.11
TMEM253-202ENST00000553744 NTF3P20783 257 aa8.11□□□□□ -1.11
TMEM253-202ENST00000553744 LINC00315P59091 139 aa8.11□□□□□ -1.11
TMEM253-202ENST00000553744 RPL23P62829 140 aaKnown RBP8.11□□□□□ -1.11
TMEM253-202ENST00000553744 SOHLH1Q5JUK2 328 aa8.11□□□□□ -1.11
TMEM253-202ENST00000553744 LINC00336Q6ZUF6 198 aa8.11□□□□□ -1.11
TMEM253-202ENST00000553744 WFDC10BQ8IUB3 73 aa8.11□□□□□ -1.11
TMEM253-202ENST00000553744 ISOC2Q96AB3 205 aa8.11□□□□□ -1.11
TMEM253-202ENST00000553744 FAT2Q9NYQ8 4349 aa8.11□□□□□ -1.11
TMEM253-202ENST00000553744 KIAA1109Q2LD37 5005 aa8.11□□□□□ -1.11
TMEM253-202ENST00000553744 EVI2AP22794 236 aa8.1□□□□□ -1.11
TMEM253-202ENST00000553744 RPL36AP83881 106 aaKnown RBP8.1□□□□□ -1.11
TMEM253-202ENST00000553744 ADIRFQ15847 76 aa8.1□□□□□ -1.11
TMEM253-202ENST00000553744 LELP1Q5T871 98 aa8.1□□□□□ -1.11
TMEM253-202ENST00000553744 C6orf223Q8N319 242 aa8.1□□□□□ -1.11
TMEM253-202ENST00000553744 C15orf54Q8N8G6 183 aa8.1□□□□□ -1.11
TMEM253-202ENST00000553744 OR10G8Q8NGN5 311 aa8.1□□□□□ -1.11
TMEM253-202ENST00000553744 RPL36ALQ969Q0 106 aaKnown RBP8.1□□□□□ -1.11
TMEM253-202ENST00000553744 HECTD4Q9Y4D8 3996 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 DNAH17Q9UFH2 4485 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 TRBV7-3A0A075B6L6 115 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 TRAV8-6A0A0B4J262 113 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 F5H697 171 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 MGPP08493 103 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 DNAH10OSP0CZ25 163 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 FOXA3P55318 350 aaPredicted RBP8.09□□□□□ -1.11
TMEM253-202ENST00000553744 TWIST1Q15672 202 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 OR10J3Q5JRS4 329 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 NEXN-AS1Q8NBZ9 246 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 TSKUQ8WUA8 353 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 GFRA4Q9GZZ7 299 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 DPH3P1Q9H4G8 78 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 V9GYV3 84 aa8.09□□□□□ -1.11
TMEM253-202ENST00000553744 IGHV3-38A0A0C4DH36 116 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms