RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 LY96Q9Y6Y9 160 aa12.67□□□□□ -0.38
CPSF2-202ENST00000553427 K7EN84 100 aa12.66□□□□□ -0.38
CPSF2-202ENST00000553427 LINC00694P0DN24 101 aa12.66□□□□□ -0.38
CPSF2-202ENST00000553427 Q6ZSN1 163 aa12.66□□□□□ -0.38
CPSF2-202ENST00000553427 OCC1Q8TAD7 63 aa12.66□□□□□ -0.38
CPSF2-202ENST00000553427 RTL8CO15255 209 aa12.65□□□□□ -0.38
CPSF2-202ENST00000553427 BTF3P20290 206 aaKnown RBP12.65□□□□□ -0.38
CPSF2-202ENST00000553427 SOHLH1Q5JUK2 328 aa12.65□□□□□ -0.38
CPSF2-202ENST00000553427 A0A087WWL8 130 aa12.64□□□□□ -0.39
CPSF2-202ENST00000553427 SIVA1O15304 175 aa12.64□□□□□ -0.39
CPSF2-202ENST00000553427 SRP19P09132 144 aaKnown RBP12.64□□□□□ -0.39
CPSF2-202ENST00000553427 C1orf134Q5TEV5 83 aa12.64□□□□□ -0.39
CPSF2-202ENST00000553427 FAM74A4Q5TZK3 123 aa12.64□□□□□ -0.39
CPSF2-202ENST00000553427 SPANXN1Q5VSR9 72 aa12.64□□□□□ -0.39
CPSF2-202ENST00000553427 FER1L6-AS1Q8NA97 138 aa12.64□□□□□ -0.39
CPSF2-202ENST00000553427 NUDT10Q8NFP7 164 aa12.64□□□□□ -0.39
CPSF2-202ENST00000553427 NUDT11Q96G61 164 aa12.64□□□□□ -0.39
CPSF2-202ENST00000553427 F2Z2F3 143 aa12.63□□□□□ -0.39
CPSF2-202ENST00000553427 SMIM7Q9BQ49 75 aa12.63□□□□□ -0.39
CPSF2-202ENST00000553427 RPP21Q9H633 154 aaKnown RBP12.63□□□□□ -0.39
CPSF2-202ENST00000553427 TRBV10-1A0A0K0K1A3 114 aa12.62□□□□□ -0.39
CPSF2-202ENST00000553427 GZMBP10144 247 aa12.62□□□□□ -0.39
CPSF2-202ENST00000553427 CACNG7P62955 275 aa12.62□□□□□ -0.39
CPSF2-202ENST00000553427 FAM231DQ6ZW35 169 aa12.62□□□□□ -0.39
CPSF2-202ENST00000553427 C14orf178Q8N769 122 aaPredicted RBP12.62□□□□□ -0.39
CPSF2-202ENST00000553427 AP1S3Q96PC3 154 aa12.62□□□□□ -0.39
CPSF2-202ENST00000553427 KRTAP1-5Q9BYS1 174 aa12.62□□□□□ -0.39
CPSF2-202ENST00000553427 SMDT1Q9H4I9 107 aa12.62□□□□□ -0.39
CPSF2-202ENST00000553427 K7EP13 123 aa12.61□□□□□ -0.39
CPSF2-202ENST00000553427 CTRLP40313 264 aa12.61□□□□□ -0.39
CPSF2-202ENST00000553427 CEBPGP53567 150 aa12.61□□□□□ -0.39
CPSF2-202ENST00000553427 RAB4BP61018 213 aa12.61□□□□□ -0.39
CPSF2-202ENST00000553427 C6orf223Q8N319 242 aa12.61□□□□□ -0.39
CPSF2-202ENST00000553427 RNASE7Q9H1E1 156 aaKnown RBP12.61□□□□□ -0.39
CPSF2-202ENST00000553427 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
CPSF2-202ENST00000553427 ATP6V0E2Q8NHE4 81 aa12.6□□□□□ -0.39
CPSF2-202ENST00000553427 CNFNQ9BYD5 112 aa12.6□□□□□ -0.39
CPSF2-202ENST00000553427 GTSF1LQ9H1H1 148 aa12.6□□□□□ -0.39
CPSF2-202ENST00000553427 MUC21A0A0G2JKD1 596 aa12.59□□□□□ -0.39
CPSF2-202ENST00000553427 MUC21A0A140T8X8 626 aa12.59□□□□□ -0.39
CPSF2-202ENST00000553427 ZNF727A8MUV8 499 aa12.59□□□□□ -0.39
CPSF2-202ENST00000553427 DNAH10OSP0CZ25 163 aa12.59□□□□□ -0.39
CPSF2-202ENST00000553427 FAM74A3Q4VXF1 159 aa12.59□□□□□ -0.39
CPSF2-202ENST00000553427 CT83Q5H943 113 aa12.59□□□□□ -0.39
CPSF2-202ENST00000553427 LINC01551Q86U37 167 aa12.59□□□□□ -0.39
CPSF2-202ENST00000553427 TPPP3Q9BW30 176 aa12.59□□□□□ -0.39
CPSF2-202ENST00000553427 KIF25-AS1Q9Y6Z4 181 aa12.59□□□□□ -0.39
CPSF2-202ENST00000553427 PKD1P98161 4303 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 GAGE12JA6NER3 117 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 GAGE1Q13065 139 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 GAGE4Q13068 117 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 GAGE5Q13069 117 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 PEA15Q15121 130 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 GAGE13Q4V321 117 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 LELP1Q5T871 98 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 WFDC10BQ8IUB3 73 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 OR10G8Q8NGN5 311 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 Q9UF83 564 aa12.58□□□□□ -0.4
CPSF2-202ENST00000553427 PRSS29PA6NIE9 313 aa12.57□□□□□ -0.4
CPSF2-202ENST00000553427 LYZL1Q6UWQ5 148 aa12.57□□□□□ -0.4
CPSF2-202ENST00000553427 PKHD1P08F94 4074 aa12.57□□□□□ -0.4
CPSF2-202ENST00000553427 TRAV9-2A0A087WT02 112 aa12.56□□□□□ -0.4
CPSF2-202ENST00000553427 TRAV8-6A0A0B4J262 113 aa12.56□□□□□ -0.4
CPSF2-202ENST00000553427 A0A1B0GVY2 172 aa12.56□□□□□ -0.4
CPSF2-202ENST00000553427 C9JQL5 133 aa12.56□□□□□ -0.4
CPSF2-202ENST00000553427 GATCO43716 136 aaKnown RBP12.56□□□□□ -0.4
CPSF2-202ENST00000553427 SMIM17P0DL12 118 aa12.56□□□□□ -0.4
CPSF2-202ENST00000553427 LINC00315P59091 139 aa12.56□□□□□ -0.4
CPSF2-202ENST00000553427 ZNF56Q15929 161 aa12.56□□□□□ -0.4
CPSF2-202ENST00000553427 DNAH11Q96DT5 4516 aa12.56□□□□□ -0.4
CPSF2-202ENST00000553427 A0A087WWC5 75 aa12.55□□□□□ -0.4
CPSF2-202ENST00000553427 A8MWL6 223 aa12.55□□□□□ -0.4
CPSF2-202ENST00000553427 TRGC1P0CF51 173 aa12.55□□□□□ -0.4
CPSF2-202ENST00000553427 EVI2AP22794 236 aa12.55□□□□□ -0.4
CPSF2-202ENST00000553427 ERVFC1-1P60608 527 aa12.55□□□□□ -0.4
CPSF2-202ENST00000553427 RPL36AP83881 106 aaKnown RBP12.55□□□□□ -0.4
CPSF2-202ENST00000553427 LINC01556Q5JQF7 62 aa12.55□□□□□ -0.4
CPSF2-202ENST00000553427 RPL36ALQ969Q0 106 aaKnown RBP12.55□□□□□ -0.4
CPSF2-202ENST00000553427 OSTCQ9NRP0 149 aa12.55□□□□□ -0.4
CPSF2-202ENST00000553427 TRBV7-3A0A075B6L6 115 aa12.54□□□□□ -0.4
CPSF2-202ENST00000553427 IGHV3-38A0A0C4DH36 116 aa12.54□□□□□ -0.4
CPSF2-202ENST00000553427 UBE2D3P61077 147 aa12.54□□□□□ -0.4
CPSF2-202ENST00000553427 UBE2D2P62837 147 aa12.54□□□□□ -0.4
CPSF2-202ENST00000553427 SRSF3P84103 164 aaKnown RBP12.54□□□□□ -0.4
CPSF2-202ENST00000553427 C10orf126Q8N4M7 172 aa12.54□□□□□ -0.4
CPSF2-202ENST00000553427 GTSF1Q8WW33 167 aa12.54□□□□□ -0.4
CPSF2-202ENST00000553427 MSRB1Q9NZV6 116 aa12.54□□□□□ -0.4
CPSF2-202ENST00000553427 FOXA3P55318 350 aaPredicted RBP12.53□□□□□ -0.4
CPSF2-202ENST00000553427 RAB14P61106 215 aa12.53□□□□□ -0.4
CPSF2-202ENST00000553427 SSTP61278 116 aa12.53□□□□□ -0.4
CPSF2-202ENST00000553427 TMEM241Q24JQ0 296 aa12.53□□□□□ -0.4
CPSF2-202ENST00000553427 OR10J3Q5JRS4 329 aa12.53□□□□□ -0.4
CPSF2-202ENST00000553427 FAM231BA6NCW3 169 aa12.52□□□□□ -0.41
CPSF2-202ENST00000553427 NTF3P20783 257 aa12.52□□□□□ -0.41
CPSF2-202ENST00000553427 NEXN-AS1Q8NBZ9 246 aa12.52□□□□□ -0.41
CPSF2-202ENST00000553427 GFRA4Q9GZZ7 299 aa12.52□□□□□ -0.41
CPSF2-202ENST00000553427 NAT8Q9UHE5 227 aa12.52□□□□□ -0.41
CPSF2-202ENST00000553427 DYNC1H1Q14204 4646 aaKnown RBP12.52□□□□□ -0.41
CPSF2-202ENST00000553427 F5H697 171 aa12.51□□□□□ -0.41
CPSF2-202ENST00000553427 Q6ZRN7 208 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms