RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 SIRPDQ9H106 197 aa5.89□□□□□ -1.47
SYT1-212ENST00000552744 TRAV41A0A0B4J266 112 aa5.89□□□□□ -1.47
SYT1-212ENST00000552744 A0A0J9YY99 117 aa5.89□□□□□ -1.47
SYT1-212ENST00000552744 TSHBP01222 138 aa5.89□□□□□ -1.47
SYT1-212ENST00000552744 RNASE3P12724 160 aaKnown RBP5.89□□□□□ -1.47
SYT1-212ENST00000552744 COX6B1P14854 86 aa5.89□□□□□ -1.47
SYT1-212ENST00000552744 UBE2D1P51668 147 aa5.89□□□□□ -1.47
SYT1-212ENST00000552744 HERVK_113P61574 105 aa5.89□□□□□ -1.47
SYT1-212ENST00000552744 LINC00477Q96M19 166 aa5.89□□□□□ -1.47
SYT1-212ENST00000552744 CENPVL3A0A0U1RRI6 287 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 CD7P09564 240 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 CFC1BP0CG36 223 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 CFC1P0CG37 223 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 Q6ZUT4 128 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 GPHB5Q86YW7 130 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 MRPL53Q96EL3 112 aaKnown RBP5.88□□□□□ -1.47
SYT1-212ENST00000552744 CARD19Q96LW7 228 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 BEX4Q9NWD9 120 aaPredicted RBP5.88□□□□□ -1.47
SYT1-212ENST00000552744 NOTCH3Q9UM47 2321 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 CHD8Q9HCK8 2581 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 NACAE9PAV3 2078 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 IGLV4-69A0A075B6H9 119 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 TRAV12-3A0A0B4J271 114 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 A0A1W2PPR1 153 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 UBE2E1P51965 193 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 FAM159AQ6UWV7 190 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 TRPT1Q86TN4 253 aaKnown RBP5.88□□□□□ -1.47
SYT1-212ENST00000552744 AJUBAQ96IF1 538 aa5.88□□□□□ -1.47
SYT1-212ENST00000552744 TRAV2A0A0B4J234 112 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 SDHAF1A6NFY7 115 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 A8MWV9 139 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 EDN2P20800 178 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 PMVKQ15126 192 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 Q1RN00 199 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 TEN1Q86WV5 123 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 C5orf56Q8N8D9 126 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 ZNRF2Q8NHG8 242 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 ITLN2Q8WWU7 325 aaPredicted RBP5.87□□□□□ -1.47
SYT1-212ENST00000552744 SPXQ9BT56 116 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 BPESC1Q9GZL8 116 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 U3KQE9 123 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 ADARB2-AS1A8MUL3 147 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 C9JAW5 83 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 LINC01619G3V211 115 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 LGALS3P17931 250 aaKnown RBP5.87□□□□□ -1.47
SYT1-212ENST00000552744 CRIP2P52943 208 aaPredicted RBP5.87□□□□□ -1.47
SYT1-212ENST00000552744 SUMO4Q6EEV6 95 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 ANKRD29Q8N6D5 301 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 PPDPFLQ8WWR9 84 aa5.87□□□□□ -1.47
SYT1-212ENST00000552744 J3QQQ9 107 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 OVOL1O14753 267 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 NPFFO15130 113 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 UBE2D3P61077 147 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 UBE2D2P62837 147 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 TCTEX1D4Q5JR98 221 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 C11orf71Q6IPW1 123 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 PRO1854Q9UHT4 67 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 CELSR2Q9HCU4 2923 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 TRAV12-2A0A075B6T6 113 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 A4D1N5 150 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 IGIPA6NJ69 53 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 IGHV3-30P01768 117 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 IGHV3-30-5P0DP03 117 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 ADORA2A-AS1P86434 159 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 ZNF56Q15929 161 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 LYRM7Q5U5X0 104 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 C10orf126Q8N4M7 172 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 CITED1Q99966 193 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 RHPN1-AS1Q9BWJ2 59 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 PRORYQ9H606 182 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 LENEPQ9Y5L5 61 aa5.86□□□□□ -1.47
SYT1-212ENST00000552744 SPTBN4Q9H254 2564 aa5.85□□□□□ -1.47
SYT1-212ENST00000552744 IGHV4-39P01824 125 aa5.85□□□□□ -1.47
SYT1-212ENST00000552744 HTN1P15515 57 aa5.85□□□□□ -1.47
SYT1-212ENST00000552744 GATA3P23771 443 aa5.85□□□□□ -1.47
SYT1-212ENST00000552744 RNF183Q96D59 192 aa5.85□□□□□ -1.47
SYT1-212ENST00000552744 ZNF580Q9UK33 172 aa5.85□□□□□ -1.47
SYT1-212ENST00000552744 CSMD2Q7Z408 3487 aa5.85□□□□□ -1.47
SYT1-212ENST00000552744 VCYO14598 125 aa5.85□□□□□ -1.47
SYT1-212ENST00000552744 ATP6V0E2Q8NHE4 81 aa5.85□□□□□ -1.47
SYT1-212ENST00000552744 SLC25A20O43772 301 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 PPP1R17O96001 155 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 PRSS2P07478 247 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 ZNF688P0C7X2 276 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 HERV-K104P63124 156 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 PAPPA-AS1Q5QFB9 102 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 SLC25A29Q8N8R3 303 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 POLR2KP53803 58 aaKnown RBP5.84□□□□□ -1.47
SYT1-212ENST00000552744 LINC00315P59091 139 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 NPC2P61916 151 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 BLCAPP62952 87 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 ANAPC13Q9BS18 74 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 MDFICQ9P1T7 246 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 ABCA2Q9BZC7 2435 aa5.84□□□□□ -1.47
SYT1-212ENST00000552744 PRRC2AP48634 2157 aaKnown RBP5.84□□□□□ -1.48
SYT1-212ENST00000552744 TRBV20-1A0A075B6N2 111 aa5.83□□□□□ -1.48
SYT1-212ENST00000552744 IGHV3-73A0A0B4J1V6 119 aa5.83□□□□□ -1.48
SYT1-212ENST00000552744 K7ENP7 123 aa5.83□□□□□ -1.48
SYT1-212ENST00000552744 SOCS3O14543 225 aa5.83□□□□□ -1.48
SYT1-212ENST00000552744 RNASE13Q5GAN3 156 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms