RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 GZMBP10144 247 aa12.71□□□□□ -0.37
PRPF40B-216ENST00000552301 SSTP61278 116 aa12.71□□□□□ -0.37
PRPF40B-216ENST00000552301 LINC00336Q6ZUF6 198 aa12.71□□□□□ -0.37
PRPF40B-216ENST00000552301 OCC1Q8TAD7 63 aa12.71□□□□□ -0.37
PRPF40B-216ENST00000552301 UFSP1Q6NVU6 142 aa12.7□□□□□ -0.38
PRPF40B-216ENST00000552301 GAGE12JA6NER3 117 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 ZNF727A8MUV8 499 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 K7EN84 100 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 SRP19P09132 144 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 SMIM17P0DL12 118 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 GAGE1Q13065 139 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 GAGE4Q13068 117 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 GAGE5Q13069 117 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 ZNF56Q15929 161 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 GAGE13Q4V321 117 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 Q6ZSN1 163 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 NUDT10Q8NFP7 164 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 NUDT11Q96G61 164 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 AP1S3Q96PC3 154 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 RPP21Q9H633 154 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 FRAS1Q86XX4 4008 aa12.69□□□□□ -0.38
PRPF40B-216ENST00000552301 A0A1W2PPQ1 181 aa12.68□□□□□ -0.38
PRPF40B-216ENST00000552301 CRYGDP07320 174 aa12.68□□□□□ -0.38
PRPF40B-216ENST00000552301 IGLC6P0CF74 106 aa12.68□□□□□ -0.38
PRPF40B-216ENST00000552301 TIRAPP58753 221 aa12.68□□□□□ -0.38
PRPF40B-216ENST00000552301 CACNG7P62955 275 aa12.68□□□□□ -0.38
PRPF40B-216ENST00000552301 C14orf178Q8N769 122 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-216ENST00000552301 ATP6V0E2Q8NHE4 81 aa12.68□□□□□ -0.38
PRPF40B-216ENST00000552301 RNASE7Q9H1E1 156 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-216ENST00000552301 LY96Q9Y6Y9 160 aa12.68□□□□□ -0.38
PRPF40B-216ENST00000552301 DNAH10Q8IVF4 4471 aa12.67□□□□□ -0.38
PRPF40B-216ENST00000552301 F2Z2F3 143 aa12.67□□□□□ -0.38
PRPF40B-216ENST00000552301 PEA15Q15121 130 aa12.67□□□□□ -0.38
PRPF40B-216ENST00000552301 C6orf223Q8N319 242 aa12.67□□□□□ -0.38
PRPF40B-216ENST00000552301 RTL8CO15255 209 aa12.66□□□□□ -0.38
PRPF40B-216ENST00000552301 GATCO43716 136 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-216ENST00000552301 TRAV8-6A0A0B4J262 113 aa12.65□□□□□ -0.38
PRPF40B-216ENST00000552301 PRSS29PA6NIE9 313 aa12.65□□□□□ -0.38
PRPF40B-216ENST00000552301 F5H697 171 aa12.65□□□□□ -0.38
PRPF40B-216ENST00000552301 ERVFC1-1P60608 527 aa12.65□□□□□ -0.38
PRPF40B-216ENST00000552301 RAB4BP61018 213 aa12.65□□□□□ -0.38
PRPF40B-216ENST00000552301 RAB14P61106 215 aa12.65□□□□□ -0.38
PRPF40B-216ENST00000552301 OR10J3Q5JRS4 329 aa12.65□□□□□ -0.38
PRPF40B-216ENST00000552301 WFDC10BQ8IUB3 73 aa12.65□□□□□ -0.38
PRPF40B-216ENST00000552301 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
PRPF40B-216ENST00000552301 TRAV9-2A0A087WT02 112 aa12.64□□□□□ -0.39
PRPF40B-216ENST00000552301 TRBV10-1A0A0K0K1A3 114 aa12.64□□□□□ -0.39
PRPF40B-216ENST00000552301 EVI2AP22794 236 aa12.64□□□□□ -0.39
PRPF40B-216ENST00000552301 RPL36AP83881 106 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-216ENST00000552301 FAM74A3Q4VXF1 159 aa12.64□□□□□ -0.39
PRPF40B-216ENST00000552301 LYZL1Q6UWQ5 148 aa12.64□□□□□ -0.39
PRPF40B-216ENST00000552301 FAM231DQ6ZW35 169 aa12.64□□□□□ -0.39
PRPF40B-216ENST00000552301 RPL36ALQ969Q0 106 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-216ENST00000552301 TRGC1P0CF51 173 aa12.63□□□□□ -0.39
PRPF40B-216ENST00000552301 CTRLP40313 264 aa12.63□□□□□ -0.39
PRPF40B-216ENST00000552301 LINC01551Q86U37 167 aa12.63□□□□□ -0.39
PRPF40B-216ENST00000552301 KRTAP1-5Q9BYS1 174 aa12.63□□□□□ -0.39
PRPF40B-216ENST00000552301 SMDT1Q9H4I9 107 aa12.63□□□□□ -0.39
PRPF40B-216ENST00000552301 A8MWL6 223 aa12.62□□□□□ -0.39
PRPF40B-216ENST00000552301 MGPP08493 103 aa12.62□□□□□ -0.39
PRPF40B-216ENST00000552301 LINC00694P0DN24 101 aa12.62□□□□□ -0.39
PRPF40B-216ENST00000552301 LELP1Q5T871 98 aa12.62□□□□□ -0.39
PRPF40B-216ENST00000552301 BTF3P20290 206 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-216ENST00000552301 TMEM241Q24JQ0 296 aa12.61□□□□□ -0.39
PRPF40B-216ENST00000552301 A0A087WWC5 75 aa12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 K7EP13 123 aa12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 DNAH10OSP0CZ25 163 aa12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 CT83Q5H943 113 aa12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 C10orf126Q8N4M7 172 aa12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 C15orf54Q8N8G6 183 aa12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 MSRB1Q9NZV6 116 aa12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 Q9UF83 564 aa12.6□□□□□ -0.39
PRPF40B-216ENST00000552301 TRBV7-3A0A075B6L6 115 aa12.59□□□□□ -0.39
PRPF40B-216ENST00000552301 NTF3P20783 257 aa12.59□□□□□ -0.39
PRPF40B-216ENST00000552301 TWIST1Q15672 202 aa12.59□□□□□ -0.39
PRPF40B-216ENST00000552301 BORCS7Q96B45 105 aa12.59□□□□□ -0.39
PRPF40B-216ENST00000552301 OSTCQ9NRP0 149 aa12.59□□□□□ -0.39
PRPF40B-216ENST00000552301 NAT8Q9UHE5 227 aa12.59□□□□□ -0.39
PRPF40B-216ENST00000552301 C9JQL5 133 aa12.58□□□□□ -0.4
PRPF40B-216ENST00000552301 H7C1H1 209 aa12.58□□□□□ -0.4
PRPF40B-216ENST00000552301 LINC00315P59091 139 aa12.58□□□□□ -0.4
PRPF40B-216ENST00000552301 SRSF3P84103 164 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-216ENST00000552301 ADIRFQ15847 76 aa12.58□□□□□ -0.4
PRPF40B-216ENST00000552301 SMIM15Q7Z3B0 74 aa12.58□□□□□ -0.4
PRPF40B-216ENST00000552301 OR10G8Q8NGN5 311 aa12.58□□□□□ -0.4
PRPF40B-216ENST00000552301 DPH3P1Q9H4G8 78 aa12.58□□□□□ -0.4
PRPF40B-216ENST00000552301 KIF25-AS1Q9Y6Z4 181 aa12.58□□□□□ -0.4
PRPF40B-216ENST00000552301 UBE2D3P61077 147 aa12.57□□□□□ -0.4
PRPF40B-216ENST00000552301 UBE2D2P62837 147 aa12.57□□□□□ -0.4
PRPF40B-216ENST00000552301 NEXN-AS1Q8NBZ9 246 aa12.57□□□□□ -0.4
PRPF40B-216ENST00000552301 GTSF1Q8WW33 167 aa12.57□□□□□ -0.4
PRPF40B-216ENST00000552301 CNFNQ9BYD5 112 aa12.57□□□□□ -0.4
PRPF40B-216ENST00000552301 RPL23P62829 140 aaKnown RBP12.56□□□□□ -0.4
PRPF40B-216ENST00000552301 LINC01556Q5JQF7 62 aa12.56□□□□□ -0.4
PRPF40B-216ENST00000552301 LCE2DQ5TA82 110 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-216ENST00000552301 ISOC2Q96AB3 205 aa12.56□□□□□ -0.4
PRPF40B-216ENST00000552301 PGLYRP4Q96LB8 373 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms