RNA–Protein interactions for RNA: ENST00000551486.1

LIMA1-207, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-207ENST00000551486 IGLV3-21P80748 117 aaPredicted RBP1.38□□□□□ -2.19
LIMA1-207ENST00000551486 ATXN8Q156A1 80 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 MIAQ16674 131 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 C10orf128Q5T292 105 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 VMO1Q7Z5L0 202 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 LYPD6Q86Y78 171 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 Q8N6K4 173 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 LINC01006Q8NI28 216 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 ZNF563Q8TA94 476 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 CIRBP-AS1Q8TBR5 109 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 SMIM14Q96QK8 99 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 CYP4F30PQ9H0H9 118 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 XAGE1AQ9HD64 81 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 PRO1854Q9UHT4 67 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 ABCC1P33527 1531 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 ITSN2Q9NZM3 1697 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 ROBO1Q9Y6N7 1651 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 TICRRQ7Z2Z1 1910 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 LOXHD1Q8IVV2 1947 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 SBF2Q86WG5 1849 aa1.38□□□□□ -2.19
LIMA1-207ENST00000551486 MED1Q15648 1581 aaPredicted RBP1.38□□□□□ -2.19
LIMA1-207ENST00000551486 MYO5CQ9NQX4 1742 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 PTPRMP28827 1452 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 KMT2EQ8IZD2 1858 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 PLXNA4Q9HCM2 1894 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 TRANK1O15050 2925 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 KIF14Q15058 1648 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 CC2D2AQ9P2K1 1620 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 DSCAMO60469 2012 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 PRRC2AP48634 2157 aaKnown RBP1.37□□□□□ -2.19
LIMA1-207ENST00000551486 MYLKQ15746 1914 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 TET3O43151 1660 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 WIZO95785 1651 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 TRBV7-3A0A075B6L6 115 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 TRAV1-2A0A0B4J238 106 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 IGHV3-66A0A0C4DH42 116 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 LRCOL1A6NCL2 159 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 TMEM14DPA8MWL7 114 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 SOCS3O14543 225 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 SH2D1AO60880 128 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 IGKV3-15P01624 115 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 BAALC-AS2P0C853 105 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 P0C880 135 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 EDDM3BP56851 147 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 PLGLAQ15195 96 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 Q6JHZ5 121 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 C2orf66Q6UXQ4 117 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 ZNF818PQ6ZRF7 136 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 DYNAPQ8N1N2 210 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 Q8NBF4 154 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 C1orf147Q96MC9 270 aaPredicted RBP1.37□□□□□ -2.19
LIMA1-207ENST00000551486 CDC42SE1Q9NRR8 79 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 TMEM14BQ9NUH8 114 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 UBE2D4Q9Y2X8 147 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 SNURFQ9Y675 71 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 S4R3C0 116 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 UNC13BO14795 1591 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 TRPM3Q9HCF6 1732 aaPredicted RBP1.37□□□□□ -2.19
LIMA1-207ENST00000551486 SHROOM2Q13796 1616 aa1.37□□□□□ -2.19
LIMA1-207ENST00000551486 PIKFYVEQ9Y2I7 2098 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 KIF20BQ96Q89 1820 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 IGKV3D-7A0A0C4DH55 119 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 TRBV10-3A0A0K0K1G6 114 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 A0A1B0GVX0 72 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 C17orf98A8MV24 154 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 PPYP01298 95 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 IGKV3-11P04433 115 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 KRTAP1-4P0C5Y4 121 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 TLX1NBP0CAT3 122 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 ANK1P16157 1881 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 UBE2D1P51668 147 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 MIR22HGQ0VDD5 57 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 IQGAP2Q13576 1575 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 PP632Q6XCG6 107 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 Q6ZS52 159 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 MON2Q7Z3U7 1717 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 CAMK2N1Q7Z7J9 78 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 ANKRD31Q8N7Z5 1873 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 FAM167A-AS1Q96KT0 104 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 CHCHD7Q9BUK0 85 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 TRPM6Q9BX84 2022 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 LINC00597Q9H2U6 94 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 LTBP4Q8N2S1 1624 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 RAPGEF6Q8TEU7 1601 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 MED12LQ86YW9 2145 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 DOCK2Q92608 1830 aa1.36□□□□□ -2.19
LIMA1-207ENST00000551486 MROH2AA6NES4 1674 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 ZNF142P52746 1687 aaPredicted RBP1.35□□□□□ -2.19
LIMA1-207ENST00000551486 AGLP35573 1532 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 EFCAB6Q5THR3 1501 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 KCPQ6ZWJ8 1503 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 EHBP1L1Q8N3D4 1523 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 KIAA0586Q9BVV6 1533 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 TSPOAP1O95153 1857 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 ERCC6L2Q5T890 1561 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 VWDEQ8N2E2 1590 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 UGGT1Q9NYU2 1555 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 MYH8P13535 1937 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 ANAPC1Q9H1A4 1944 aa1.35□□□□□ -2.19
LIMA1-207ENST00000551486 ZNF318Q5VUA4 2279 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms