RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 MBD3L1Q8WWY6 194 aa13.65□□□□□ -0.22
SLC48A1-208ENST00000551301 BCL2L11O43521 198 aa13.64□□□□□ -0.23
SLC48A1-208ENST00000551301 GCSHP23434 173 aa13.64□□□□□ -0.23
SLC48A1-208ENST00000551301 FUSP35637 526 aaKnown RBP eCLIP13.64□□□□□ -0.23
SLC48A1-208ENST00000551301 NTN5Q8WTR8 489 aaPredicted RBP13.64□□□□□ -0.23
SLC48A1-208ENST00000551301 SAMD10Q9BYL1 202 aa13.64□□□□□ -0.23
SLC48A1-208ENST00000551301 JPT2Q9H910 190 aa13.64□□□□□ -0.23
SLC48A1-208ENST00000551301 URGCP-MRPS24S4R325 110 aa13.64□□□□□ -0.23
SLC48A1-208ENST00000551301 TRAV8-3A0A0A6YYJ7 113 aa13.63□□□□□ -0.23
SLC48A1-208ENST00000551301 A0A1B0GV50 99 aa13.63□□□□□ -0.23
SLC48A1-208ENST00000551301 H2AFB1P0C5Y9 115 aa13.63□□□□□ -0.23
SLC48A1-208ENST00000551301 SFRP2Q96HF1 295 aa13.63□□□□□ -0.23
SLC48A1-208ENST00000551301 IGLV5-52A0A0A0MRZ9 124 aa13.62□□□□□ -0.23
SLC48A1-208ENST00000551301 UFSP1Q6NVU6 142 aa13.62□□□□□ -0.23
SLC48A1-208ENST00000551301 C14orf178Q8N769 122 aaPredicted RBP13.62□□□□□ -0.23
SLC48A1-208ENST00000551301 DNAH5Q8TE73 4624 aa13.62□□□□□ -0.23
SLC48A1-208ENST00000551301 A0A087WWL8 130 aa13.61□□□□□ -0.23
SLC48A1-208ENST00000551301 EPM2AB3EWF7 344 aa13.61□□□□□ -0.23
SLC48A1-208ENST00000551301 LINC00694P0DN24 101 aa13.61□□□□□ -0.23
SLC48A1-208ENST00000551301 ABCA13Q86UQ4 5058 aa13.61□□□□□ -0.23
SLC48A1-208ENST00000551301 EIF5AL1Q6IS14 154 aaKnown RBP13.6□□□□□ -0.23
SLC48A1-208ENST00000551301 KCNIP4Q6PIL6 250 aa13.6□□□□□ -0.23
SLC48A1-208ENST00000551301 BAGE2Q86Y30 109 aa13.6□□□□□ -0.23
SLC48A1-208ENST00000551301 TRBV10-1A0A0K0K1A3 114 aa13.59□□□□□ -0.23
SLC48A1-208ENST00000551301 LRCOL1A6NCL2 159 aa13.59□□□□□ -0.23
SLC48A1-208ENST00000551301 TEX46H3BTG2 121 aa13.59□□□□□ -0.23
SLC48A1-208ENST00000551301 KRTAP10-1P60331 282 aa13.59□□□□□ -0.23
SLC48A1-208ENST00000551301 RPL36AP83881 106 aaKnown RBP13.59□□□□□ -0.23
SLC48A1-208ENST00000551301 RPL36ALQ969Q0 106 aaKnown RBP13.59□□□□□ -0.23
SLC48A1-208ENST00000551301 COX11Q9Y6N1 276 aa13.59□□□□□ -0.23
SLC48A1-208ENST00000551301 SCO2A0A1W2PP80 73 aa13.58□□□□□ -0.24
SLC48A1-208ENST00000551301 TMUB2Q71RG4 321 aa13.58□□□□□ -0.24
SLC48A1-208ENST00000551301 Q8N814 137 aa13.58□□□□□ -0.24
SLC48A1-208ENST00000551301 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.58□□□□□ -0.24
SLC48A1-208ENST00000551301 RMI2Q96E14 147 aa13.58□□□□□ -0.24
SLC48A1-208ENST00000551301 CXCL1P09341 107 aa13.57□□□□□ -0.24
SLC48A1-208ENST00000551301 FRZBQ92765 325 aa13.57□□□□□ -0.24
SLC48A1-208ENST00000551301 MANBALQ9NQG1 85 aa13.57□□□□□ -0.24
SLC48A1-208ENST00000551301 A0A087WX48 190 aa13.56□□□□□ -0.24
SLC48A1-208ENST00000551301 RAB5CP51148 216 aa13.56□□□□□ -0.24
SLC48A1-208ENST00000551301 ELOBQ15370 118 aa13.56□□□□□ -0.24
SLC48A1-208ENST00000551301 Q9UF83 564 aa13.56□□□□□ -0.24
SLC48A1-208ENST00000551301 APOBP04114 4563 aaKnown RBP13.56□□□□□ -0.24
SLC48A1-208ENST00000551301 TRBV7-3A0A075B6L6 115 aa13.55□□□□□ -0.24
SLC48A1-208ENST00000551301 XGP55808 180 aa13.55□□□□□ -0.24
SLC48A1-208ENST00000551301 RAB4BP61018 213 aa13.55□□□□□ -0.24
SLC48A1-208ENST00000551301 ZNF56Q15929 161 aa13.55□□□□□ -0.24
SLC48A1-208ENST00000551301 SPANXN1Q5VSR9 72 aa13.55□□□□□ -0.24
SLC48A1-208ENST00000551301 PRR27Q6MZM9 219 aa13.55□□□□□ -0.24
SLC48A1-208ENST00000551301 DAZ4Q86SG3 579 aaKnown RBP13.55□□□□□ -0.24
SLC48A1-208ENST00000551301 DAZ3Q9NR90 486 aaKnown RBP13.55□□□□□ -0.24
SLC48A1-208ENST00000551301 GNG13Q9P2W3 67 aa13.55□□□□□ -0.24
SLC48A1-208ENST00000551301 MLST8Q9BVC4 326 aa13.54□□□□□ -0.24
SLC48A1-208ENST00000551301 SMIM17P0DL12 118 aa13.53□□□□□ -0.24
SLC48A1-208ENST00000551301 RPL35P42766 123 aaKnown RBP13.53□□□□□ -0.24
SLC48A1-208ENST00000551301 NIT1Q86X76 327 aa13.53□□□□□ -0.24
SLC48A1-208ENST00000551301 TMEM70Q9BUB7 260 aa13.53□□□□□ -0.24
SLC48A1-208ENST00000551301 CHCHD7Q9BUK0 85 aa13.53□□□□□ -0.24
SLC48A1-208ENST00000551301 OR5AL1P0C617 328 aa13.52□□□□□ -0.25
SLC48A1-208ENST00000551301 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
SLC48A1-208ENST00000551301 Q8N3U1 123 aa13.52□□□□□ -0.25
SLC48A1-208ENST00000551301 OR10AG1Q8NH19 301 aa13.52□□□□□ -0.25
SLC48A1-208ENST00000551301 DAZAP1Q96EP5 407 aaKnown RBP13.52□□□□□ -0.25
SLC48A1-208ENST00000551301 TRAV1-1A0A0B4J248 108 aa13.51□□□□□ -0.25
SLC48A1-208ENST00000551301 F5H697 171 aa13.51□□□□□ -0.25
SLC48A1-208ENST00000551301 UBE2D3P61077 147 aa13.51□□□□□ -0.25
SLC48A1-208ENST00000551301 UBE2D2P62837 147 aa13.51□□□□□ -0.25
SLC48A1-208ENST00000551301 IFNA1P01562 189 aa13.5□□□□□ -0.25
SLC48A1-208ENST00000551301 OR10G8Q8NGN5 311 aa13.5□□□□□ -0.25
SLC48A1-208ENST00000551301 KLK12Q9UKR0 248 aa13.5□□□□□ -0.25
SLC48A1-208ENST00000551301 TMEM262E9PQX1 116 aa13.49□□□□□ -0.25
SLC48A1-208ENST00000551301 FAM229AH3BQW9 127 aa13.49□□□□□ -0.25
SLC48A1-208ENST00000551301 SNAI2O43623 268 aa13.49□□□□□ -0.25
SLC48A1-208ENST00000551301 PKIAP61925 76 aa13.49□□□□□ -0.25
SLC48A1-208ENST00000551301 Q5VSD8 79 aa13.49□□□□□ -0.25
SLC48A1-208ENST00000551301 C11orf52Q96A22 123 aa13.49□□□□□ -0.25
SLC48A1-208ENST00000551301 SSBP4Q9BWG4 385 aaPredicted RBP13.49□□□□□ -0.25
SLC48A1-208ENST00000551301 IGKV2D-24A0A075B6R9 120 aa13.48□□□□□ -0.25
SLC48A1-208ENST00000551301 RPS20P60866 119 aaKnown RBP13.48□□□□□ -0.25
SLC48A1-208ENST00000551301 SSTP61278 116 aa13.48□□□□□ -0.25
SLC48A1-208ENST00000551301 Q0VG73 95 aa13.48□□□□□ -0.25
SLC48A1-208ENST00000551301 AP1S3Q96PC3 154 aa13.48□□□□□ -0.25
SLC48A1-208ENST00000551301 TRBV6-8A0A0A6YYG3 113 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 MUC21A0A0G2JKD1 596 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 MUC21A0A140T8X8 626 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 XKRY2A2RUG3 117 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 LECT2O14960 151 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 PDE6DO43924 150 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 C1QBP02746 253 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 INAFM2P0DMQ5 153 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 GNG4P50150 75 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 CCL20P78556 96 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 TMEM97Q5BJF2 176 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 CENPWQ5EE01 88 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 Q8N976 141 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 UBE2WQ96B02 151 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 BIN3Q9NQY0 253 aa13.47□□□□□ -0.25
SLC48A1-208ENST00000551301 RBFOX3A6NFN3 312 aa13.46□□□□□ -0.25
SLC48A1-208ENST00000551301 SMIM12Q96EX1 92 aa13.46□□□□□ -0.25
SLC48A1-208ENST00000551301 DERL1Q9BUN8 251 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms