RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 RHEBQ15382 184 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 GTSF1Q8WW33 167 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
NUP188-211ENST00000550219 DNAH11Q96DT5 4516 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 A0A087WWC5 75 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 A0A0J9YY99 117 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 C7orf77A4D0Y5 90 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 SNURFLB1AK76 121 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 H3BVH4 76 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 SNAPINO95295 136 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 LINC00612Q8N6U2 182 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 FER1L6-AS1Q8NA97 138 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 CTDSP1Q9GZU7 261 aa9.34□□□□□ -0.91
NUP188-211ENST00000550219 TRAV26-1A0A087WT03 109 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 SMIM27A0A1W2PRY6 76 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 C16orf90A8MZG2 172 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 F2Z2F3 143 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 M0R2P5 195 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 NXPH4O95158 308 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 CTRLP40313 264 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 PIK3CD-AS1Q5SR53 167 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 WDR73Q6P4I2 378 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 RASL10AQ92737 203 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 TMEM242Q9NWH2 141 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 PKD1P98161 4303 aa9.33□□□□□ -0.92
NUP188-211ENST00000550219 HIGD1CA8MV81 97 aa9.31□□□□□ -0.92
NUP188-211ENST00000550219 HOXA5P20719 270 aa9.31□□□□□ -0.92
NUP188-211ENST00000550219 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
NUP188-211ENST00000550219 LYZL1Q6UWQ5 148 aa9.31□□□□□ -0.92
NUP188-211ENST00000550219 Q6ZTI0 123 aa9.31□□□□□ -0.92
NUP188-211ENST00000550219 C18orf15Q96N68 181 aa9.31□□□□□ -0.92
NUP188-211ENST00000550219 IMMP2LQ96T52 175 aa9.31□□□□□ -0.92
NUP188-211ENST00000550219 PHLDA3Q9Y5J5 127 aa9.31□□□□□ -0.92
NUP188-211ENST00000550219 PCLOQ9Y6V0 5065 aa9.31□□□□□ -0.92
NUP188-211ENST00000550219 TRGV1A0A0A0MS02 117 aa9.3□□□□□ -0.92
NUP188-211ENST00000550219 CACNG7P62955 275 aa9.3□□□□□ -0.92
NUP188-211ENST00000550219 ZNF876PQ49A33 203 aa9.3□□□□□ -0.92
NUP188-211ENST00000550219 ATRAIDQ6UW56 229 aa9.3□□□□□ -0.92
NUP188-211ENST00000550219 NUP35Q8NFH5 326 aa9.3□□□□□ -0.92
NUP188-211ENST00000550219 OR10AG1Q8NH19 301 aa9.3□□□□□ -0.92
NUP188-211ENST00000550219 RPS10P5Q9NQ39 176 aa9.3□□□□□ -0.92
NUP188-211ENST00000550219 NAT8BQ9UHF3 227 aa9.3□□□□□ -0.92
NUP188-211ENST00000550219 MUC4Q99102 2169 aa9.3□□□□□ -0.92
NUP188-211ENST00000550219 ZFP82Q8N141 532 aa9.29□□□□□ -0.92
NUP188-211ENST00000550219 SYT8Q8NBV8 401 aa9.29□□□□□ -0.92
NUP188-211ENST00000550219 PGLYRP4Q96LB8 373 aa9.29□□□□□ -0.92
NUP188-211ENST00000550219 TPPP3Q9BW30 176 aa9.29□□□□□ -0.92
NUP188-211ENST00000550219 Q9H8V8 135 aa9.29□□□□□ -0.92
NUP188-211ENST00000550219 MRPL16Q9NX20 251 aaKnown RBP9.29□□□□□ -0.92
NUP188-211ENST00000550219 MUC21A0A0G2JKD1 596 aa9.28□□□□□ -0.92
NUP188-211ENST00000550219 MUC21A0A140T8X8 626 aa9.28□□□□□ -0.92
NUP188-211ENST00000550219 ATP6V1G1O75348 118 aa9.28□□□□□ -0.92
NUP188-211ENST00000550219 TTC32Q5I0X7 151 aa9.28□□□□□ -0.92
NUP188-211ENST00000550219 KRTAP1-5Q9BYS1 174 aa9.28□□□□□ -0.92
NUP188-211ENST00000550219 TRGV2A0A075B6R0 118 aa9.27□□□□□ -0.93
NUP188-211ENST00000550219 A0A1B0GUT8 65 aa9.27□□□□□ -0.93
NUP188-211ENST00000550219 M0R381 172 aa9.27□□□□□ -0.93
NUP188-211ENST00000550219 RS1O15537 224 aa9.27□□□□□ -0.93
NUP188-211ENST00000550219 S100A1P23297 94 aa9.27□□□□□ -0.93
NUP188-211ENST00000550219 SPANXN1Q5VSR9 72 aa9.27□□□□□ -0.93
NUP188-211ENST00000550219 KRTAP4-5Q9BYR2 181 aa9.27□□□□□ -0.93
NUP188-211ENST00000550219 TRAV9-1A0A075B6T8 112 aa9.26□□□□□ -0.93
NUP188-211ENST00000550219 TRAV4A0A0B4J268 109 aa9.26□□□□□ -0.93
NUP188-211ENST00000550219 A8MWV9 139 aa9.26□□□□□ -0.93
NUP188-211ENST00000550219 NTF3P20783 257 aa9.26□□□□□ -0.93
NUP188-211ENST00000550219 ESRGQ1W209 222 aa9.26□□□□□ -0.93
NUP188-211ENST00000550219 UFSP1Q6NVU6 142 aa9.26□□□□□ -0.93
NUP188-211ENST00000550219 MSRB1Q9NZV6 116 aa9.26□□□□□ -0.93
NUP188-211ENST00000550219 A0A1B0GXF2 115 aa9.25□□□□□ -0.93
NUP188-211ENST00000550219 CRYGDP07320 174 aa9.25□□□□□ -0.93
NUP188-211ENST00000550219 RIGQ13278 110 aa9.25□□□□□ -0.93
NUP188-211ENST00000550219 CFAP126Q5VTH2 177 aa9.25□□□□□ -0.93
NUP188-211ENST00000550219 SPATA12Q7Z6I5 190 aa9.25□□□□□ -0.93
NUP188-211ENST00000550219 JPT2Q9H910 190 aa9.25□□□□□ -0.93
NUP188-211ENST00000550219 MRPS16Q9Y3D3 137 aaKnown RBP9.25□□□□□ -0.93
NUP188-211ENST00000550219 A0A1B0GW15 77 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 CIDEAO60543 219 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 IGHV3-53P01767 116 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 SSTP61278 116 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 TWIST1Q15672 202 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 KCNIP4Q6PIL6 250 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 ATP5L2Q7Z4Y8 100 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 MAPKAPK5-AS1Q8N8E1 139 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 BORCS7Q96B45 105 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 BTF3L4Q96K17 158 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 YPEL4Q96NS1 127 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 UPK3BQ9BT76 320 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 SAMD10Q9BYL1 202 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 KIF25-AS1Q9Y6Z4 181 aa9.24□□□□□ -0.93
NUP188-211ENST00000550219 A0A096LPF7 62 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 H3BNG1 76 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 TRGC1P0CF51 173 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 S100PP25815 95 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 LINC00315P59091 139 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 ZFP2Q6ZN57 461 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 GATD1Q8NB37 220 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 OR4C5Q8NGB2 326 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 VSIG2Q96IQ7 327 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms