RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 CACNG7P62955 275 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 PMCHL1Q16048 86 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 PDZD11Q5EBL8 140 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 GFI1BQ5VTD9 330 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 MRPL52Q86TS9 123 aaKnown RBP4.8□□□□□ -1.64
COX6A1-202ENST00000549525 TMEM256Q8N2U0 113 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 DEFB125Q8N687 156 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 MRAPQ8TCY5 172 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 ZC2HC1AQ96GY0 325 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 PGLYRP4Q96LB8 373 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 C20orf144Q9BQM9 153 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 ALKBH7Q9BT30 221 aaPredicted RBP4.8□□□□□ -1.64
COX6A1-202ENST00000549525 HSPB8Q9UJY1 196 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 SELENOKQ9Y6D0 94 aa4.8□□□□□ -1.64
COX6A1-202ENST00000549525 NBEAL1Q6ZS30 2694 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 ZNF705FA8MVS1 300 aaPredicted RBP4.79□□□□□ -1.64
COX6A1-202ENST00000549525 M0R3E3 92 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 PPP1R17O96001 155 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 LINC00614P0C842 121 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 G0S2P27469 103 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 CAMPP49913 170 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 TRPT1Q86TN4 253 aaKnown RBP4.79□□□□□ -1.64
COX6A1-202ENST00000549525 GTSF1Q8WW33 167 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 CNFNQ9BYD5 112 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 NAGKQ9UJ70 344 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 GOLT1BQ9Y3E0 138 aa4.79□□□□□ -1.64
COX6A1-202ENST00000549525 TRAV8-1A0A0A6YYK1 113 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 TRAV21A0A0B4J279 112 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 LINC01549A6NIU2 74 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 KNCNA6PVL3 124 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 A8MTW9 85 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 SPINK4O60575 86 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 SH2D1AO60880 128 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 SERF1AO75920 110 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 CA1P00915 261 aaPredicted RBP4.78□□□□□ -1.64
COX6A1-202ENST00000549525 ORM1P02763 201 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 RPL35AP18077 110 aaKnown RBP4.78□□□□□ -1.64
COX6A1-202ENST00000549525 CTRLP40313 264 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 AMTP48728 403 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 DEFA6Q01524 100 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 SLAQ13239 276 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 LINC00322Q6ZN03 302 aaPredicted RBP4.78□□□□□ -1.64
COX6A1-202ENST00000549525 NIT1Q86X76 327 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 ORMDL3Q8N138 153 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 FER1L6-AS1Q8NA97 138 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 C18orf32Q8TCD1 76 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 URB1-AS1Q96HZ7 61 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 TMEM208Q9BTX3 173 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 TMEM191AQ9H0A3 160 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 AGPAT4-IT1Q9H0P7 198 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 TP53TG1Q9Y2A0 90 aa4.78□□□□□ -1.64
COX6A1-202ENST00000549525 NOTCH1P46531 2555 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 IGHV4-4A0A075B6R2 117 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 IGKV2-40A0A087WW87 121 aaPredicted RBP4.77□□□□□ -1.65
COX6A1-202ENST00000549525 GRIFINA4D1Z8 144 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 GAGE12JA6NER3 117 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 SMIM9A6NGZ8 99 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 K7EMI3 77 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 INSP01308 110 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 IGKV2D-40P01614 121 aaPredicted RBP4.77□□□□□ -1.65
COX6A1-202ENST00000549525 IGKV3-20P01619 116 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 FRMD6-AS1P0C7T7 363 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 HLA-DMBP28068 263 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 CRIP1P50238 77 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 FAM104BQ5XKR9 115 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 SGK494Q96LW2 274 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 RCHY1Q96PM5 261 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 B9D2Q9BPU9 175 aa4.77□□□□□ -1.65
COX6A1-202ENST00000549525 RBMY1BA6NDE4 496 aaKnown RBP4.76□□□□□ -1.65
COX6A1-202ENST00000549525 RBMY1EA6NEQ0 496 aaKnown RBP4.76□□□□□ -1.65
COX6A1-202ENST00000549525 PRAC2D3DTV9 90 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 F6UB75 175 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 K7EIL1 84 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 M0R2Z0 102 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 CRXO43186 299 aaPredicted RBP4.76□□□□□ -1.65
COX6A1-202ENST00000549525 RBMY1DP0C7P1 496 aaKnown RBP4.76□□□□□ -1.65
COX6A1-202ENST00000549525 IGLC6P0CF74 106 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 ZNF705DP0CH99 300 aaPredicted RBP4.76□□□□□ -1.65
COX6A1-202ENST00000549525 ZNF705BP0CI00 300 aaPredicted RBP4.76□□□□□ -1.65
COX6A1-202ENST00000549525 DDTP30046 118 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 KIAA1644Q3SXP7 199 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 GDF5OSQ5U4N7 250 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 LYZL1Q6UWQ5 148 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 TEX43Q6ZNM6 134 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 FA2HQ7L5A8 372 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 VGLL1Q99990 258 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 TMEM70Q9BUB7 260 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 VAMP8Q9BV40 100 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 MAP1LC3CQ9BXW4 147 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 XCL2Q9UBD3 114 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 U3KQK5 164 aa4.76□□□□□ -1.65
COX6A1-202ENST00000549525 C7orf71A4D174 169 aa4.75□□□□□ -1.65
COX6A1-202ENST00000549525 KRTAP29-1A8MX34 341 aaPredicted RBP4.75□□□□□ -1.65
COX6A1-202ENST00000549525 KLLNB2CW77 178 aa4.75□□□□□ -1.65
COX6A1-202ENST00000549525 LEPROTL1O95214 131 aa4.75□□□□□ -1.65
COX6A1-202ENST00000549525 MIFP14174 115 aa4.75□□□□□ -1.65
COX6A1-202ENST00000549525 CKS2P33552 79 aa4.75□□□□□ -1.65
COX6A1-202ENST00000549525 RNASE4P34096 147 aaKnown RBP4.75□□□□□ -1.65
COX6A1-202ENST00000549525 ERCC8Q13216 396 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms