RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 DEFB130AP0DP74 79 aa6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 GZMBP10144 247 aa6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 SMCPP49901 116 aaPredicted RBP6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 OR4C5Q8NGB2 326 aa6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 FRZBQ92765 325 aa6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 PGLYRP4Q96LB8 373 aa6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 MUC4Q99102 2169 aa6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 EDA2RQ9HAV5 297 aa6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 MRPL16Q9NX20 251 aaKnown RBP6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 DEFB4AO15263 64 aa6.96□□□□□ -1.3
SMARCD1-206ENST00000549274 RS1O15537 224 aa6.96□□□□□ -1.3
SMARCD1-206ENST00000549274 TWIST1Q15672 202 aa6.96□□□□□ -1.3
SMARCD1-206ENST00000549274 Q6ZTI0 123 aa6.96□□□□□ -1.3
SMARCD1-206ENST00000549274 NUP35Q8NFH5 326 aa6.96□□□□□ -1.3
SMARCD1-206ENST00000549274 OR10AG1Q8NH19 301 aa6.96□□□□□ -1.3
SMARCD1-206ENST00000549274 GTSF1Q8WW33 167 aa6.96□□□□□ -1.3
SMARCD1-206ENST00000549274 WWC2-AS2Q96NR7 200 aa6.96□□□□□ -1.3
SMARCD1-206ENST00000549274 TRGV4A0A0C4DH28 118 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 NUPR2A6NF83 97 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 H7C1H1 209 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 PRM2P04554 102 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 NTF3P20783 257 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 TCTAP57738 103 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 HBBP68871 147 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 ZNF575Q86XF7 245 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 DPH3P1Q9H4G8 78 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 SMCO4Q9NRQ5 59 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 CELA1Q9UNI1 258 aa6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 KLK5Q9Y337 293 aaPredicted RBP6.95□□□□□ -1.3
SMARCD1-206ENST00000549274 TENM3Q9P273 2699 aa6.94□□□□□ -1.3
SMARCD1-206ENST00000549274 STAB2Q8WWQ8 2551 aa6.94□□□□□ -1.3
SMARCD1-206ENST00000549274 H3BNG1 76 aa6.94□□□□□ -1.3
SMARCD1-206ENST00000549274 RAB4BP61018 213 aa6.94□□□□□ -1.3
SMARCD1-206ENST00000549274 C12orf74Q32Q52 190 aa6.94□□□□□ -1.3
SMARCD1-206ENST00000549274 CFAP126Q5VTH2 177 aa6.94□□□□□ -1.3
SMARCD1-206ENST00000549274 TMEM191AQ9H0A3 160 aa6.94□□□□□ -1.3
SMARCD1-206ENST00000549274 PRO0255Q9UI72 69 aa6.94□□□□□ -1.3
SMARCD1-206ENST00000549274 DEFB131BA0A096LNP1 70 aa6.93□□□□□ -1.3
SMARCD1-206ENST00000549274 TRBV6-4A0A1B0GX49 114 aa6.93□□□□□ -1.3
SMARCD1-206ENST00000549274 PPP1R17O96001 155 aa6.93□□□□□ -1.3
SMARCD1-206ENST00000549274 MT-ND6P03923 174 aa6.93□□□□□ -1.3
SMARCD1-206ENST00000549274 Q6ZTC4 211 aa6.93□□□□□ -1.3
SMARCD1-206ENST00000549274 SH2D6Q7Z4S9 175 aa6.93□□□□□ -1.3
SMARCD1-206ENST00000549274 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.93□□□□□ -1.3
SMARCD1-206ENST00000549274 C15orf53Q8NAA6 179 aa6.93□□□□□ -1.3
SMARCD1-206ENST00000549274 PRADC1Q9BSG0 188 aa6.93□□□□□ -1.3
SMARCD1-206ENST00000549274 NACAE9PAV3 2078 aa6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 TRBV10-1A0A0K0K1A3 114 aa6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 F5H768 121 aa6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 ATP6V1G1O75348 118 aa6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 NANOS2P60321 138 aaKnown RBP6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 RHOHQ15669 191 aa6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 ZNF56Q15929 161 aa6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 FAM74A4Q5TZK3 123 aa6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 GATD1Q8NB37 220 aa6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 PHLDA1Q8WV24 401 aaPredicted RBP6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 HHLA3Q9XRX5 114 aa6.92□□□□□ -1.3
SMARCD1-206ENST00000549274 TRBV24-1A0A075B6N3 115 aa6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 A0A1B0GXF2 115 aa6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 C3orf84H3BNL1 204 aa6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 IGHV3-53P01767 116 aa6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 HLA-DQA1P01909 254 aa6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 PPBPP02775 128 aa6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 HTN3P15516 51 aa6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 MRPL54Q6P161 138 aaKnown RBP6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 C14orf178Q8N769 122 aaPredicted RBP6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 MUC7Q8TAX7 377 aa6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 MRAP2Q96G30 205 aa6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 DNAH7Q8WXX0 4024 aa6.91□□□□□ -1.3
SMARCD1-206ENST00000549274 MUC21A0A0G2JKD1 596 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 MUC21A0A140T8X8 626 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 F5H697 171 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 K7EQD1 137 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 PAX4O43316 350 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 CRYGDP07320 174 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 MGPP08493 103 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 GATA1P15976 413 aaPredicted RBP6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 CAMPP49913 170 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 FAM3BP58499 235 aaPredicted RBP6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 SSTP61278 116 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 ZNF479Q96JC4 524 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 DNAJC30Q96LL9 226 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 GNB1LQ9BYB4 327 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 URGCP-MRPS24S4R325 110 aa6.9□□□□□ -1.3
SMARCD1-206ENST00000549274 A0A087WWL8 130 aa6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 EVI2AP22794 236 aa6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 CRYBA4P53673 196 aa6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 RPL36AP83881 106 aaKnown RBP6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 FHL2Q14192 279 aa6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 MRPL23Q16540 153 aaKnown RBP6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 FAM104BQ5XKR9 115 aa6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 UFSP1Q6NVU6 142 aa6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 CEMP1Q6PRD7 247 aaPredicted RBP6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 POM121L12Q8N7R1 296 aa6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 MSRB1Q9NZV6 116 aa6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 LAMTOR2Q9Y2Q5 125 aa6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 ICOSQ9Y6W8 199 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms