RNA–Protein interactions for RNA: ENST00000548749.5

RBFOX1-211, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-211ENST00000548749 ATP6V0E2Q8NHE4 81 aa13.56□□□□□ -0.24
RBFOX1-211ENST00000548749 DAZAP1Q96EP5 407 aaKnown RBP13.56□□□□□ -0.24
RBFOX1-211ENST00000548749 MUC21A0A0G2JKD1 596 aa13.55□□□□□ -0.24
RBFOX1-211ENST00000548749 MUC21A0A140T8X8 626 aa13.55□□□□□ -0.24
RBFOX1-211ENST00000548749 BTF3P20290 206 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-211ENST00000548749 EVI2AP22794 236 aa13.55□□□□□ -0.24
RBFOX1-211ENST00000548749 TRAV8-6A0A0B4J262 113 aa13.54□□□□□ -0.24
RBFOX1-211ENST00000548749 CRYGDP07320 174 aa13.54□□□□□ -0.24
RBFOX1-211ENST00000548749 DNAH10OSP0CZ25 163 aa13.54□□□□□ -0.24
RBFOX1-211ENST00000548749 OR10J3Q5JRS4 329 aa13.54□□□□□ -0.24
RBFOX1-211ENST00000548749 GTSF1LQ9H1H1 148 aa13.54□□□□□ -0.24
RBFOX1-211ENST00000548749 Q9UF83 564 aa13.54□□□□□ -0.24
RBFOX1-211ENST00000548749 TRBV20OR9-2A0A075B6H5 130 aa13.53□□□□□ -0.24
RBFOX1-211ENST00000548749 SNAI2O43623 268 aa13.53□□□□□ -0.24
RBFOX1-211ENST00000548749 SSTP61278 116 aa13.53□□□□□ -0.24
RBFOX1-211ENST00000548749 SPANXN1Q5VSR9 72 aa13.53□□□□□ -0.24
RBFOX1-211ENST00000548749 OR2D3Q8NGH3 330 aa13.53□□□□□ -0.24
RBFOX1-211ENST00000548749 SMIM12Q96EX1 92 aa13.53□□□□□ -0.24
RBFOX1-211ENST00000548749 TNFRSF18Q9Y5U5 241 aa13.53□□□□□ -0.24
RBFOX1-211ENST00000548749 PKD1P98161 4303 aa13.53□□□□□ -0.24
RBFOX1-211ENST00000548749 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.25
RBFOX1-211ENST00000548749 OR5AL1P0C617 328 aa13.52□□□□□ -0.25
RBFOX1-211ENST00000548749 GZMBP10144 247 aa13.52□□□□□ -0.25
RBFOX1-211ENST00000548749 LELP1Q5T871 98 aa13.52□□□□□ -0.25
RBFOX1-211ENST00000548749 SSBP4Q9BWG4 385 aaPredicted RBP13.52□□□□□ -0.25
RBFOX1-211ENST00000548749 PKHD1P08F94 4074 aa13.51□□□□□ -0.25
RBFOX1-211ENST00000548749 C19orf71A6NCJ1 209 aa13.51□□□□□ -0.25
RBFOX1-211ENST00000548749 RBFOX3A6NFN3 312 aa13.51□□□□□ -0.25
RBFOX1-211ENST00000548749 LINC00694P0DN24 101 aa13.51□□□□□ -0.25
RBFOX1-211ENST00000548749 TPPP3Q9BW30 176 aa13.51□□□□□ -0.25
RBFOX1-211ENST00000548749 KRTAP17-1Q9BYP8 105 aa13.51□□□□□ -0.25
RBFOX1-211ENST00000548749 BIN3Q9NQY0 253 aa13.51□□□□□ -0.25
RBFOX1-211ENST00000548749 P01737 135 aa13.5□□□□□ -0.25
RBFOX1-211ENST00000548749 RPS20P60866 119 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-211ENST00000548749 MSRB1Q9NZV6 116 aa13.5□□□□□ -0.25
RBFOX1-211ENST00000548749 K7EP13 123 aa13.49□□□□□ -0.25
RBFOX1-211ENST00000548749 ZNF56Q15929 161 aa13.49□□□□□ -0.25
RBFOX1-211ENST00000548749 Q6ZRN7 208 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-211ENST00000548749 C10orf126Q8N4M7 172 aa13.49□□□□□ -0.25
RBFOX1-211ENST00000548749 FER1L6-AS1Q8NA97 138 aa13.49□□□□□ -0.25
RBFOX1-211ENST00000548749 LYPD6BQ8NI32 183 aa13.49□□□□□ -0.25
RBFOX1-211ENST00000548749 LINC01556Q5JQF7 62 aa13.48□□□□□ -0.25
RBFOX1-211ENST00000548749 NFE4Q86UQ8 179 aa13.48□□□□□ -0.25
RBFOX1-211ENST00000548749 DNAH11Q96DT5 4516 aa13.47□□□□□ -0.25
RBFOX1-211ENST00000548749 XKRY2A2RUG3 117 aa13.47□□□□□ -0.25
RBFOX1-211ENST00000548749 IGHV3-30P01768 117 aa13.47□□□□□ -0.25
RBFOX1-211ENST00000548749 IGHV3-33P01772 117 aa13.47□□□□□ -0.25
RBFOX1-211ENST00000548749 IGHV3-30-3P0DP02 117 aa13.47□□□□□ -0.25
RBFOX1-211ENST00000548749 IGHV3-30-5P0DP03 117 aa13.47□□□□□ -0.25
RBFOX1-211ENST00000548749 CEBPGP53567 150 aa13.47□□□□□ -0.25
RBFOX1-211ENST00000548749 TOR2AQ5JU69 321 aa13.47□□□□□ -0.25
RBFOX1-211ENST00000548749 C16orf90A8MZG2 172 aa13.46□□□□□ -0.25
RBFOX1-211ENST00000548749 TMEM250H0YL14 139 aa13.46□□□□□ -0.25
RBFOX1-211ENST00000548749 IGLC6P0CF74 106 aa13.46□□□□□ -0.25
RBFOX1-211ENST00000548749 RAB4BP61018 213 aa13.46□□□□□ -0.25
RBFOX1-211ENST00000548749 RPL36AP83881 106 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-211ENST00000548749 SPATA12Q7Z6I5 190 aa13.46□□□□□ -0.25
RBFOX1-211ENST00000548749 RPL36ALQ969Q0 106 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-211ENST00000548749 AP1S3Q96PC3 154 aa13.46□□□□□ -0.25
RBFOX1-211ENST00000548749 EIF5A2Q9GZV4 153 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-211ENST00000548749 DYNC1H1Q14204 4646 aaKnown RBP13.46□□□□□ -0.26
RBFOX1-211ENST00000548749 TRBV10-1A0A0K0K1A3 114 aa13.45□□□□□ -0.26
RBFOX1-211ENST00000548749 F5H697 171 aa13.45□□□□□ -0.26
RBFOX1-211ENST00000548749 SMIM17P0DL12 118 aa13.45□□□□□ -0.26
RBFOX1-211ENST00000548749 NUDT10Q8NFP7 164 aa13.45□□□□□ -0.26
RBFOX1-211ENST00000548749 OCC1Q8TAD7 63 aa13.45□□□□□ -0.26
RBFOX1-211ENST00000548749 NUDT11Q96G61 164 aa13.45□□□□□ -0.26
RBFOX1-211ENST00000548749 A0A087WWC5 75 aa13.44□□□□□ -0.26
RBFOX1-211ENST00000548749 K7EN84 100 aa13.44□□□□□ -0.26
RBFOX1-211ENST00000548749 RNASE7Q9H1E1 156 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-211ENST00000548749 ERVFC1-1P60608 527 aa13.43□□□□□ -0.26
RBFOX1-211ENST00000548749 CACNG7P62955 275 aa13.43□□□□□ -0.26
RBFOX1-211ENST00000548749 TRBV7-3A0A075B6L6 115 aa13.42□□□□□ -0.26
RBFOX1-211ENST00000548749 LYZL1Q6UWQ5 148 aa13.42□□□□□ -0.26
RBFOX1-211ENST00000548749 Q8N3U1 123 aa13.42□□□□□ -0.26
RBFOX1-211ENST00000548749 FAM210AQ96ND0 272 aa13.42□□□□□ -0.26
RBFOX1-211ENST00000548749 RPP21Q9H633 154 aaKnown RBP13.42□□□□□ -0.26
RBFOX1-211ENST00000548749 Q9HAA7 133 aa13.42□□□□□ -0.26
RBFOX1-211ENST00000548749 KIAA1109Q2LD37 5005 aa13.42□□□□□ -0.26
RBFOX1-211ENST00000548749 IBA57-AS1B1ANH7 110 aa13.41□□□□□ -0.26
RBFOX1-211ENST00000548749 F2Z2F3 143 aa13.41□□□□□ -0.26
RBFOX1-211ENST00000548749 EREGO14944 169 aa13.41□□□□□ -0.26
RBFOX1-211ENST00000548749 MGPP08493 103 aa13.41□□□□□ -0.26
RBFOX1-211ENST00000548749 KRTAP10-2P60368 255 aa13.41□□□□□ -0.26
RBFOX1-211ENST00000548749 UBE2D3P61077 147 aa13.41□□□□□ -0.26
RBFOX1-211ENST00000548749 UBE2D2P62837 147 aa13.41□□□□□ -0.26
RBFOX1-211ENST00000548749 NEXN-AS1Q8NBZ9 246 aa13.41□□□□□ -0.26
RBFOX1-211ENST00000548749 KIF25-AS1Q9Y6Z4 181 aa13.41□□□□□ -0.26
RBFOX1-211ENST00000548749 OR10G8Q8NGN5 311 aa13.4□□□□□ -0.26
RBFOX1-211ENST00000548749 PSCAO43653 123 aa13.39□□□□□ -0.27
RBFOX1-211ENST00000548749 SMIM7Q9BQ49 75 aa13.38□□□□□ -0.27
RBFOX1-211ENST00000548749 URGCP-MRPS24S4R325 110 aa13.38□□□□□ -0.27
RBFOX1-211ENST00000548749 HERC2O95714 4834 aa13.38□□□□□ -0.27
RBFOX1-211ENST00000548749 GATCO43716 136 aaKnown RBP13.37□□□□□ -0.27
RBFOX1-211ENST00000548749 TRGC1P0CF51 173 aa13.37□□□□□ -0.27
RBFOX1-211ENST00000548749 NTF3P20783 257 aa13.37□□□□□ -0.27
RBFOX1-211ENST00000548749 CTRLP40313 264 aa13.37□□□□□ -0.27
RBFOX1-211ENST00000548749 DAZ4Q86SG3 579 aaKnown RBP13.37□□□□□ -0.27
RBFOX1-211ENST00000548749 DAZ3Q9NR90 486 aaKnown RBP13.37□□□□□ -0.27
RBFOX1-211ENST00000548749 A0A087WTM6 91 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms