RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-204ENST00000547310 IGLV3-19P01714 112 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 SFTA3P0C7M3 94 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 GNG11P61952 73 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 ZNF816Q0VGE8 651 aaPredicted RBP2.34□□□□□ -2.03
LGR5-204ENST00000547310 KRTAP13-2Q52LG2 175 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 CFAP126Q5VTH2 177 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 C1orf64Q8NEQ6 169 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 OR8B3Q8NGG8 313 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 CYP4F30PQ9H0H9 118 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 C14orf132Q9NPU4 83 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 ZNF355PQ9NSJ1 428 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 NDUFA12Q9UI09 145 aa2.34□□□□□ -2.03
LGR5-204ENST00000547310 COL27A1Q8IZC6 1860 aaPredicted RBP2.34□□□□□ -2.03
LGR5-204ENST00000547310 SHROOM2Q13796 1616 aa2.34□□□□□ -2.04
LGR5-204ENST00000547310 SCN9AQ15858 1988 aa2.34□□□□□ -2.04
LGR5-204ENST00000547310 TANC2Q9HCD6 1990 aa2.34□□□□□ -2.04
LGR5-204ENST00000547310 NWD2Q9ULI1 1742 aa2.34□□□□□ -2.04
LGR5-204ENST00000547310 GPR179Q6PRD1 2367 aa2.34□□□□□ -2.04
LGR5-204ENST00000547310 C1orf167Q5SNV9 1468 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 PATJQ8NI35 1801 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 MYO5AQ9Y4I1 1855 aaKnown RBP2.33□□□□□ -2.04
LGR5-204ENST00000547310 PTPRFP10586 1907 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 PIK3C2BO00750 1634 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 IGKV1D-37A0A075B6S9 117 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 IGKV1OR2-108A0A075B7D4 117 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 LOC107984156A0A0G2JMH3 177 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 TCRBV4S1A1TA0A5B7 111 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 CRYM-AS1A6NIL9 109 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 A8MUU9 505 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 C17orf98A8MV24 154 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 UMAD1C9J7I0 102 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 F2Z2F3 143 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 H7C2G1 150 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 CRPP02741 224 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 CLPSP04118 112 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 RNASE2P10153 161 aaKnown RBP2.33□□□□□ -2.04
LGR5-204ENST00000547310 SMIM11AP58511 58 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 S100A7L2Q5SY68 101 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 SLC48A1Q6P1K1 146 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 ARL17AQ8IVW1 177 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 FAM19A2Q8N3H0 131 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 TMEM105Q8N8V8 129 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 CCDC88CQ9P219 2028 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 CLTCQ00610 1675 aaKnown RBP2.33□□□□□ -2.04
LGR5-204ENST00000547310 PLXNA3P51805 1871 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 NKTRP30414 1462 aaKnown RBP2.33□□□□□ -2.04
LGR5-204ENST00000547310 SHANK2Q9UPX8 1470 aa2.33□□□□□ -2.04
LGR5-204ENST00000547310 LTBP4Q8N2S1 1624 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 CFAP43Q8NDM7 1665 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 RGPD1P0DJD0 1748 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 TNS1Q9HBL0 1735 aaKnown RBP2.32□□□□□ -2.04
LGR5-204ENST00000547310 RGPD8O14715 1765 aaPredicted RBP2.32□□□□□ -2.04
LGR5-204ENST00000547310 RGPD2P0DJD1 1756 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 RGPD5Q99666 1765 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 TRAV13-2A0A0B4J235 113 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 TRAV3A0A0B4J244 114 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 TRAV40A0A0B4J280 105 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 A6NIN4 97 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 ASAH2BP0C7U1 165 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 SMIM13P0DJ93 91 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 UBE2G1P62253 170 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 IGFBP7Q16270 282 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 C1orf134Q5TEV5 83 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 FAM27BQ5VT28 67 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 RPL7L1Q6DKI1 246 aaKnown RBP2.32□□□□□ -2.04
LGR5-204ENST00000547310 CASC2Q6XLA1 102 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 Q6ZQT0 140 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 ZNF826PQ6ZT77 177 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 ODF3Q96PU9 254 aa2.32□□□□□ -2.04
LGR5-204ENST00000547310 ZFC3H1O60293 1989 aaKnown RBP2.31□□□□□ -2.04
LGR5-204ENST00000547310 SCN8AQ9UQD0 1980 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 A0A087WSZ3 146 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 TRBV10-3A0A0K0K1G6 114 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 H3BQ85 93 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 IGKV1-17P01599 117 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 IGHV3-53P01767 116 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 DSCR4P56555 118 aaPredicted RBP2.31□□□□□ -2.04
LGR5-204ENST00000547310 NNATQ16517 81 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 FAM229BQ4G0N7 80 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 C9orf116Q5BN46 136 aaPredicted RBP2.31□□□□□ -2.04
LGR5-204ENST00000547310 SPANXN5Q5MJ07 72 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 TMEM170BQ5T4T1 132 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 CYP2G1PQ6ZSU1 146 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 SMIM5Q71RC9 77 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 LINC00643Q86TS7 51 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 CMTM2Q8TAZ6 248 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 HIGD1BQ9P298 99 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 LINC00474Q9P2X8 69 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 LRRC7Q96NW7 1537 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 CROCC2H7BZ55 1655 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 KDM3BQ7LBC6 1761 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
LGR5-204ENST00000547310 IGLV10-54A0A075B6I4 117 aa2.3□□□□□ -2.04
LGR5-204ENST00000547310 TRBV7-1A0A0A6YYK4 115 aa2.3□□□□□ -2.04
LGR5-204ENST00000547310 B4DSR2 109 aa2.3□□□□□ -2.04
LGR5-204ENST00000547310 E7EUB6 86 aa2.3□□□□□ -2.04
LGR5-204ENST00000547310 H7BZZ5 65 aa2.3□□□□□ -2.04
LGR5-204ENST00000547310 IGLV7-43P04211 117 aa2.3□□□□□ -2.04
LGR5-204ENST00000547310 BAALC-AS2P0C853 105 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms