RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CD300EQ496F6 205 aaPredicted RBP9.48□□□□□ -0.89
SCAF11-209ENST00000547018 ZNF876PQ49A33 203 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 COX8CQ7Z4L0 72 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 AP1S3Q96PC3 154 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 KLK9Q2XQG4 91 aa9.47□□□□□ -0.89
SCAF11-209ENST00000547018 VPS25Q9BRG1 176 aa9.47□□□□□ -0.89
SCAF11-209ENST00000547018 DPH3P1Q9H4G8 78 aa9.47□□□□□ -0.89
SCAF11-209ENST00000547018 NXT2Q9NPJ8 142 aaKnown RBP9.47□□□□□ -0.89
SCAF11-209ENST00000547018 IGHV3-16A0A0C4DH30 117 aa9.47□□□□□ -0.89
SCAF11-209ENST00000547018 K7EQG2 157 aa9.47□□□□□ -0.89
SCAF11-209ENST00000547018 LAGE3Q14657 143 aa9.47□□□□□ -0.89
SCAF11-209ENST00000547018 COL5A1-AS1Q5SY13 56 aa9.47□□□□□ -0.89
SCAF11-209ENST00000547018 U3KQK5 164 aa9.47□□□□□ -0.89
SCAF11-209ENST00000547018 NSD1Q96L73 2696 aaPredicted RBP9.47□□□□□ -0.89
SCAF11-209ENST00000547018 KMT2BQ9UMN6 2715 aaPredicted RBP9.46□□□□□ -0.89
SCAF11-209ENST00000547018 K7EMT4 169 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 SUMO2P61956 95 aaKnown RBP9.46□□□□□ -0.89
SCAF11-209ENST00000547018 LINC01545Q5VT33 79 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 RASL10AQ92737 203 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 RAB37Q96AX2 223 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 AKAP9Q99996 3911 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 P0DMU3 169 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 FAM231AP0DMU4 169 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 FAM231CP0DMU5 169 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 PROK1P58294 105 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 NRACQ8N912 160 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 SCGB3A1Q96QR1 104 aa9.46□□□□□ -0.89
SCAF11-209ENST00000547018 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.89
SCAF11-209ENST00000547018 OR9G4Q8NGQ1 327 aa9.46□□□□□ -0.9
SCAF11-209ENST00000547018 PSMG3-AS1Q96PY0 264 aa9.46□□□□□ -0.9
SCAF11-209ENST00000547018 WFDC10AQ9H1F0 79 aa9.46□□□□□ -0.9
SCAF11-209ENST00000547018 RPL39P62891 51 aaKnown RBP9.45□□□□□ -0.9
SCAF11-209ENST00000547018 Q8N8P6 123 aa9.45□□□□□ -0.9
SCAF11-209ENST00000547018 LINC01587Q99440 93 aa9.45□□□□□ -0.9
SCAF11-209ENST00000547018 STAB1Q9NY15 2570 aa9.45□□□□□ -0.9
SCAF11-209ENST00000547018 ATP6V0BQ99437 205 aa9.45□□□□□ -0.9
SCAF11-209ENST00000547018 CNFNQ9BYD5 112 aa9.45□□□□□ -0.9
SCAF11-209ENST00000547018 SMIM2Q9BVW6 85 aa9.44□□□□□ -0.9
SCAF11-209ENST00000547018 ST20Q9HBF5 79 aa9.44□□□□□ -0.9
SCAF11-209ENST00000547018 VAMP3Q15836 100 aa9.44□□□□□ -0.9
SCAF11-209ENST00000547018 IGHV1OR15-1A0A075B7D0 117 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 K7EP13 123 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 CRXO43186 299 aaPredicted RBP9.43□□□□□ -0.9
SCAF11-209ENST00000547018 FSHBP01225 129 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 IGHV3-53P01767 116 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 OPRPNQ99935 248 aaPredicted RBP9.43□□□□□ -0.9
SCAF11-209ENST00000547018 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 SAP30O75446 220 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 SUMO4Q6EEV6 95 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 Q9UF83 564 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 RBMY1A1P0DJD3 496 aaKnown RBP9.43□□□□□ -0.9
SCAF11-209ENST00000547018 RBMY1CP0DJD4 496 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 RPL35AP18077 110 aaKnown RBP9.43□□□□□ -0.9
SCAF11-209ENST00000547018 RIPPLY3P57055 190 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 RBMY1FQ15415 496 aaKnown RBP9.43□□□□□ -0.9
SCAF11-209ENST00000547018 RAX2Q96IS3 184 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 JMJD8Q96S16 334 aa9.43□□□□□ -0.9
SCAF11-209ENST00000547018 KLLNB2CW77 178 aa9.42□□□□□ -0.9
SCAF11-209ENST00000547018 CCL24O00175 119 aa9.42□□□□□ -0.9
SCAF11-209ENST00000547018 RNASE13Q5GAN3 156 aaKnown RBP9.42□□□□□ -0.9
SCAF11-209ENST00000547018 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.42□□□□□ -0.9
SCAF11-209ENST00000547018 DUSP14O95147 198 aaKnown RBP9.42□□□□□ -0.9
SCAF11-209ENST00000547018 C2orf66Q6UXQ4 117 aa9.42□□□□□ -0.9
SCAF11-209ENST00000547018 LRRC75A-AS1Q8N1F1 130 aa9.42□□□□□ -0.9
SCAF11-209ENST00000547018 SCRT2Q9NQ03 307 aa9.42□□□□□ -0.9
SCAF11-209ENST00000547018 PEMTQ9UBM1 199 aa9.42□□□□□ -0.9
SCAF11-209ENST00000547018 NOTCH1P46531 2555 aa9.42□□□□□ -0.9
SCAF11-209ENST00000547018 IGHV3-38A0A0C4DH36 116 aa9.41□□□□□ -0.9
SCAF11-209ENST00000547018 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
SCAF11-209ENST00000547018 PTTG1IPP53801 180 aa9.41□□□□□ -0.9
SCAF11-209ENST00000547018 IGHV3-64A0A075B6Q5 118 aa9.41□□□□□ -0.9
SCAF11-209ENST00000547018 IGKCP01834 107 aa9.41□□□□□ -0.9
SCAF11-209ENST00000547018 GCSHP23434 173 aa9.41□□□□□ -0.9
SCAF11-209ENST00000547018 MRPL16Q9NX20 251 aaKnown RBP9.41□□□□□ -0.9
SCAF11-209ENST00000547018 CCL25O15444 150 aa9.4□□□□□ -0.9
SCAF11-209ENST00000547018 ODF1Q14990 250 aa9.4□□□□□ -0.9
SCAF11-209ENST00000547018 PHLDA1Q8WV24 401 aaPredicted RBP9.4□□□□□ -0.9
SCAF11-209ENST00000547018 TP53TG1Q9Y2A0 90 aa9.4□□□□□ -0.9
SCAF11-209ENST00000547018 RBMY1BA6NDE4 496 aaKnown RBP9.39□□□□□ -0.91
SCAF11-209ENST00000547018 RBMY1EA6NEQ0 496 aaKnown RBP9.39□□□□□ -0.91
SCAF11-209ENST00000547018 RBMY1DP0C7P1 496 aaKnown RBP9.39□□□□□ -0.91
SCAF11-209ENST00000547018 LGALS9BQ3B8N2 356 aa9.39□□□□□ -0.91
SCAF11-209ENST00000547018 LGALS9CQ6DKI2 356 aa9.39□□□□□ -0.91
SCAF11-209ENST00000547018 LINC01006Q8NI28 216 aa9.39□□□□□ -0.91
SCAF11-209ENST00000547018 SCGB2A2Q13296 93 aa9.39□□□□□ -0.91
SCAF11-209ENST00000547018 MAP6D1Q9H9H5 199 aa9.39□□□□□ -0.91
SCAF11-209ENST00000547018 IGLV2-18A0A075B6J9 118 aa9.39□□□□□ -0.91
SCAF11-209ENST00000547018 DPM2O94777 84 aa9.39□□□□□ -0.91
SCAF11-209ENST00000547018 COX8AP10176 69 aa9.39□□□□□ -0.91
SCAF11-209ENST00000547018 FOXI2Q6ZQN5 318 aa9.39□□□□□ -0.91
SCAF11-209ENST00000547018 STHQ8IWL8 128 aa9.39□□□□□ -0.91
SCAF11-209ENST00000547018 H3BMM0 161 aa9.38□□□□□ -0.91
SCAF11-209ENST00000547018 DEFB114Q30KQ6 69 aa9.38□□□□□ -0.91
SCAF11-209ENST00000547018 MRAP2Q96G30 205 aa9.38□□□□□ -0.91
SCAF11-209ENST00000547018 KIR2DL4Q99706 377 aa9.38□□□□□ -0.91
SCAF11-209ENST00000547018 MRPS16Q9Y3D3 137 aaKnown RBP9.38□□□□□ -0.91
SCAF11-209ENST00000547018 BRI3O95415 125 aa9.38□□□□□ -0.91
SCAF11-209ENST00000547018 SYT8Q8NBV8 401 aa9.38□□□□□ -0.91
SCAF11-209ENST00000547018 ATP5LO75964 103 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms