RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 MUC21A0A0G2JKD1 596 aa11.64□□□□□ -0.55
CCDC38-203ENST00000546803 MUC21A0A140T8X8 626 aa11.64□□□□□ -0.55
CCDC38-203ENST00000546803 A8MWL6 223 aa11.64□□□□□ -0.55
CCDC38-203ENST00000546803 CTRLP40313 264 aa11.64□□□□□ -0.55
CCDC38-203ENST00000546803 ESRGQ1W209 222 aa11.64□□□□□ -0.55
CCDC38-203ENST00000546803 FAM74A4Q5TZK3 123 aa11.64□□□□□ -0.55
CCDC38-203ENST00000546803 LYZL1Q6UWQ5 148 aa11.64□□□□□ -0.55
CCDC38-203ENST00000546803 LINC00588Q9Y4M8 146 aa11.64□□□□□ -0.55
CCDC38-203ENST00000546803 RPL23P62829 140 aaKnown RBP11.63□□□□□ -0.55
CCDC38-203ENST00000546803 C15orf54Q8N8G6 183 aa11.63□□□□□ -0.55
CCDC38-203ENST00000546803 ISOC2Q96AB3 205 aa11.63□□□□□ -0.55
CCDC38-203ENST00000546803 AP1S3Q96PC3 154 aa11.63□□□□□ -0.55
CCDC38-203ENST00000546803 PLECQ15149 4684 aaKnown RBP11.62□□□□□ -0.55
CCDC38-203ENST00000546803 SSTP61278 116 aa11.62□□□□□ -0.55
CCDC38-203ENST00000546803 ADIRFQ15847 76 aa11.62□□□□□ -0.55
CCDC38-203ENST00000546803 Q6ZSN1 163 aa11.62□□□□□ -0.55
CCDC38-203ENST00000546803 CNFNQ9BYD5 112 aa11.62□□□□□ -0.55
CCDC38-203ENST00000546803 MRPS16Q9Y3D3 137 aaKnown RBP11.62□□□□□ -0.55
CCDC38-203ENST00000546803 KMT2CQ8NEZ4 4911 aaKnown RBP11.62□□□□□ -0.55
CCDC38-203ENST00000546803 LOC100131303A0A0U1RQF7 123 aa11.61□□□□□ -0.55
CCDC38-203ENST00000546803 SMIM17P0DL12 118 aa11.61□□□□□ -0.55
CCDC38-203ENST00000546803 RAB4BP61018 213 aa11.61□□□□□ -0.55
CCDC38-203ENST00000546803 ZNRF2Q8NHG8 242 aa11.61□□□□□ -0.55
CCDC38-203ENST00000546803 GTSF1Q8WW33 167 aa11.61□□□□□ -0.55
CCDC38-203ENST00000546803 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
CCDC38-203ENST00000546803 FAM231BA6NCW3 169 aa11.6□□□□□ -0.55
CCDC38-203ENST00000546803 TRGC1P0CF51 173 aa11.6□□□□□ -0.55
CCDC38-203ENST00000546803 FOXA3P55318 350 aaPredicted RBP11.6□□□□□ -0.55
CCDC38-203ENST00000546803 UQCC3Q6UW78 93 aa11.6□□□□□ -0.55
CCDC38-203ENST00000546803 LYPD5Q6UWN5 251 aa11.6□□□□□ -0.55
CCDC38-203ENST00000546803 C14orf178Q8N769 122 aaPredicted RBP11.6□□□□□ -0.55
CCDC38-203ENST00000546803 TSKUQ8WUA8 353 aa11.6□□□□□ -0.55
CCDC38-203ENST00000546803 GFRA4Q9GZZ7 299 aa11.6□□□□□ -0.55
CCDC38-203ENST00000546803 ALMS1Q8TCU4 4167 aa11.6□□□□□ -0.55
CCDC38-203ENST00000546803 TRBV10-1A0A0K0K1A3 114 aa11.59□□□□□ -0.55
CCDC38-203ENST00000546803 NTF3P20783 257 aa11.59□□□□□ -0.55
CCDC38-203ENST00000546803 TIRAPP58753 221 aa11.59□□□□□ -0.55
CCDC38-203ENST00000546803 OR10G8Q8NGN5 311 aa11.59□□□□□ -0.55
CCDC38-203ENST00000546803 MSRB1Q9NZV6 116 aa11.59□□□□□ -0.55
CCDC38-203ENST00000546803 KIF25-AS1Q9Y6Z4 181 aa11.59□□□□□ -0.55
CCDC38-203ENST00000546803 ZNF56Q15929 161 aa11.58□□□□□ -0.56
CCDC38-203ENST00000546803 Q9H8V8 135 aa11.58□□□□□ -0.56
CCDC38-203ENST00000546803 V9GYV3 84 aa11.58□□□□□ -0.56
CCDC38-203ENST00000546803 TWIST1Q15672 202 aa11.57□□□□□ -0.56
CCDC38-203ENST00000546803 ATP6V0E2Q8NHE4 81 aa11.57□□□□□ -0.56
CCDC38-203ENST00000546803 BORCS7Q96B45 105 aa11.57□□□□□ -0.56
CCDC38-203ENST00000546803 IGLV2-18A0A075B6J9 118 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 GAGE12JA6NER3 117 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 F5H697 171 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 LINC00694P0DN24 101 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 LINC00315P59091 139 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 PNRC1Q12796 327 aaPredicted RBP11.56□□□□□ -0.56
CCDC38-203ENST00000546803 GAGE1Q13065 139 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 GAGE4Q13068 117 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 GAGE5Q13069 117 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 GAGE13Q4V321 117 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 PGLYRP4Q96LB8 373 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 SACSQ9NZJ4 4579 aa11.56□□□□□ -0.56
CCDC38-203ENST00000546803 HIGD1CA8MV81 97 aa11.55□□□□□ -0.56
CCDC38-203ENST00000546803 EVI2AP22794 236 aa11.55□□□□□ -0.56
CCDC38-203ENST00000546803 RPL36AP83881 106 aaKnown RBP11.55□□□□□ -0.56
CCDC38-203ENST00000546803 Q6ZR54 194 aa11.55□□□□□ -0.56
CCDC38-203ENST00000546803 SMIM15Q7Z3B0 74 aa11.55□□□□□ -0.56
CCDC38-203ENST00000546803 RPL36ALQ969Q0 106 aaKnown RBP11.55□□□□□ -0.56
CCDC38-203ENST00000546803 DPH3P1Q9H4G8 78 aa11.55□□□□□ -0.56
CCDC38-203ENST00000546803 DNAH1Q9P2D7 4330 aa11.54□□□□□ -0.56
CCDC38-203ENST00000546803 M0R2N4 97 aa11.54□□□□□ -0.56
CCDC38-203ENST00000546803 MGPP08493 103 aa11.54□□□□□ -0.56
CCDC38-203ENST00000546803 GTSF1LQ9H1H1 148 aa11.54□□□□□ -0.56
CCDC38-203ENST00000546803 Q9UF83 564 aa11.54□□□□□ -0.56
CCDC38-203ENST00000546803 TRBV7-3A0A075B6L6 115 aa11.53□□□□□ -0.56
CCDC38-203ENST00000546803 NBDYA0A0U1RRE5 68 aa11.53□□□□□ -0.56
CCDC38-203ENST00000546803 A0A1B0GUT8 65 aa11.53□□□□□ -0.56
CCDC38-203ENST00000546803 LINC00862A6NCI5 91 aa11.53□□□□□ -0.56
CCDC38-203ENST00000546803 H7C1H1 209 aa11.53□□□□□ -0.56
CCDC38-203ENST00000546803 SIVA1O15304 175 aa11.53□□□□□ -0.56
CCDC38-203ENST00000546803 TTC32Q5I0X7 151 aa11.53□□□□□ -0.56
CCDC38-203ENST00000546803 COMMD7Q86VX2 200 aa11.53□□□□□ -0.56
CCDC38-203ENST00000546803 NAT8BQ9UHF3 227 aa11.53□□□□□ -0.56
CCDC38-203ENST00000546803 NACAE9PAV3 2078 aa11.52□□□□□ -0.57
CCDC38-203ENST00000546803 TMEM218A2RU14 115 aa11.52□□□□□ -0.57
CCDC38-203ENST00000546803 LYSTQ99698 3801 aa11.51□□□□□ -0.57
CCDC38-203ENST00000546803 TRAV8-6A0A0B4J262 113 aa11.51□□□□□ -0.57
CCDC38-203ENST00000546803 SMIM27A0A1W2PRY6 76 aa11.51□□□□□ -0.57
CCDC38-203ENST00000546803 PPP1R2P9O14990 202 aa11.51□□□□□ -0.57
CCDC38-203ENST00000546803 UBE2D3P61077 147 aa11.51□□□□□ -0.57
CCDC38-203ENST00000546803 UBE2D2P62837 147 aa11.51□□□□□ -0.57
CCDC38-203ENST00000546803 LELP1Q5T871 98 aa11.51□□□□□ -0.57
CCDC38-203ENST00000546803 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
CCDC38-203ENST00000546803 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
CCDC38-203ENST00000546803 A0A087WWC5 75 aa11.5□□□□□ -0.57
CCDC38-203ENST00000546803 M0QY20 66 aa11.5□□□□□ -0.57
CCDC38-203ENST00000546803 RIGQ13278 110 aa11.5□□□□□ -0.57
CCDC38-203ENST00000546803 SUMO4Q6EEV6 95 aa11.5□□□□□ -0.57
CCDC38-203ENST00000546803 DNAJC30Q96LL9 226 aa11.5□□□□□ -0.57
CCDC38-203ENST00000546803 F8W036 122 aa11.49□□□□□ -0.57
CCDC38-203ENST00000546803 K7EP13 123 aa11.49□□□□□ -0.57
CCDC38-203ENST00000546803 MT-ND4LP03901 98 aa11.49□□□□□ -0.57
CCDC38-203ENST00000546803 OR10J3Q5JRS4 329 aa11.49□□□□□ -0.57
CCDC38-203ENST00000546803 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms