RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 FAM231DQ6ZW35 169 aa11.67□□□□□ -0.54
LTBR-215ENST00000546296 LINC00588Q9Y4M8 146 aa11.67□□□□□ -0.54
LTBR-215ENST00000546296 LOC100131303A0A0U1RQF7 123 aa11.66□□□□□ -0.54
LTBR-215ENST00000546296 TRBV6-4A0A1B0GX49 114 aa11.66□□□□□ -0.54
LTBR-215ENST00000546296 F2Z2F3 143 aa11.66□□□□□ -0.54
LTBR-215ENST00000546296 NXPH4O95158 308 aa11.66□□□□□ -0.54
LTBR-215ENST00000546296 IGLC6P0CF74 106 aa11.66□□□□□ -0.54
LTBR-215ENST00000546296 CACNG7P62955 275 aa11.66□□□□□ -0.54
LTBR-215ENST00000546296 NEGR1Q7Z3B1 354 aa11.66□□□□□ -0.54
LTBR-215ENST00000546296 NAT8Q9UHE5 227 aa11.66□□□□□ -0.54
LTBR-215ENST00000546296 CRYGDP07320 174 aa11.65□□□□□ -0.54
LTBR-215ENST00000546296 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
LTBR-215ENST00000546296 UFSP1Q6NVU6 142 aa11.65□□□□□ -0.54
LTBR-215ENST00000546296 LYZL1Q6UWQ5 148 aa11.65□□□□□ -0.54
LTBR-215ENST00000546296 Q6ZSN1 163 aa11.65□□□□□ -0.54
LTBR-215ENST00000546296 A8MWL6 223 aa11.64□□□□□ -0.55
LTBR-215ENST00000546296 ADIRFQ15847 76 aa11.64□□□□□ -0.55
LTBR-215ENST00000546296 SH2D6Q7Z4S9 175 aa11.64□□□□□ -0.55
LTBR-215ENST00000546296 C15orf54Q8N8G6 183 aa11.64□□□□□ -0.55
LTBR-215ENST00000546296 HYDINQ4G0P3 5121 aa11.64□□□□□ -0.55
LTBR-215ENST00000546296 IGLV2-18A0A075B6J9 118 aa11.63□□□□□ -0.55
LTBR-215ENST00000546296 RPL23P62829 140 aaKnown RBP11.63□□□□□ -0.55
LTBR-215ENST00000546296 LYPD5Q6UWN5 251 aa11.63□□□□□ -0.55
LTBR-215ENST00000546296 C14orf178Q8N769 122 aaPredicted RBP11.63□□□□□ -0.55
LTBR-215ENST00000546296 AP1S3Q96PC3 154 aa11.63□□□□□ -0.55
LTBR-215ENST00000546296 OSTCQ9NRP0 149 aa11.63□□□□□ -0.55
LTBR-215ENST00000546296 F5H697 171 aa11.62□□□□□ -0.55
LTBR-215ENST00000546296 M0R2N4 97 aa11.62□□□□□ -0.55
LTBR-215ENST00000546296 ZNF56Q15929 161 aa11.62□□□□□ -0.55
LTBR-215ENST00000546296 MRPS16Q9Y3D3 137 aaKnown RBP11.62□□□□□ -0.55
LTBR-215ENST00000546296 GAGE12JA6NER3 117 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 CTRLP40313 264 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 GAGE1Q13065 139 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 GAGE4Q13068 117 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 GAGE5Q13069 117 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 GAGE13Q4V321 117 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 CT83Q5H943 113 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 WDR73Q6P4I2 378 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 ZNRF2Q8NHG8 242 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 GTSF1Q8WW33 167 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 ISOC2Q96AB3 205 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 MSRB1Q9NZV6 116 aa11.61□□□□□ -0.55
LTBR-215ENST00000546296 NTF3P20783 257 aa11.6□□□□□ -0.55
LTBR-215ENST00000546296 RAB4BP61018 213 aa11.6□□□□□ -0.55
LTBR-215ENST00000546296 TWIST1Q15672 202 aa11.6□□□□□ -0.55
LTBR-215ENST00000546296 OR10G8Q8NGN5 311 aa11.6□□□□□ -0.55
LTBR-215ENST00000546296 PGLYRP4Q96LB8 373 aa11.6□□□□□ -0.55
LTBR-215ENST00000546296 Q9H8V8 135 aa11.6□□□□□ -0.55
LTBR-215ENST00000546296 NACAE9PAV3 2078 aa11.59□□□□□ -0.55
LTBR-215ENST00000546296 TRGC1P0CF51 173 aa11.59□□□□□ -0.55
LTBR-215ENST00000546296 TSKUQ8WUA8 353 aa11.59□□□□□ -0.55
LTBR-215ENST00000546296 BORCS7Q96B45 105 aa11.59□□□□□ -0.55
LTBR-215ENST00000546296 MGPP08493 103 aa11.58□□□□□ -0.56
LTBR-215ENST00000546296 ATP6V0E2Q8NHE4 81 aa11.58□□□□□ -0.56
LTBR-215ENST00000546296 UPK3BQ9BT76 320 aa11.58□□□□□ -0.56
LTBR-215ENST00000546296 SMIM15Q7Z3B0 74 aa11.57□□□□□ -0.56
LTBR-215ENST00000546296 GFRA4Q9GZZ7 299 aa11.57□□□□□ -0.56
LTBR-215ENST00000546296 Q9UF83 564 aa11.57□□□□□ -0.56
LTBR-215ENST00000546296 KIF25-AS1Q9Y6Z4 181 aa11.57□□□□□ -0.56
LTBR-215ENST00000546296 V9GYV3 84 aa11.57□□□□□ -0.56
LTBR-215ENST00000546296 KMT2AQ03164 3969 aa11.56□□□□□ -0.56
LTBR-215ENST00000546296 TRBV10-1A0A0K0K1A3 114 aa11.56□□□□□ -0.56
LTBR-215ENST00000546296 EVI2AP22794 236 aa11.56□□□□□ -0.56
LTBR-215ENST00000546296 FOXA3P55318 350 aaPredicted RBP11.56□□□□□ -0.56
LTBR-215ENST00000546296 RPL36AP83881 106 aaKnown RBP11.56□□□□□ -0.56
LTBR-215ENST00000546296 UQCC3Q6UW78 93 aa11.56□□□□□ -0.56
LTBR-215ENST00000546296 RPL36ALQ969Q0 106 aaKnown RBP11.56□□□□□ -0.56
LTBR-215ENST00000546296 CNFNQ9BYD5 112 aa11.56□□□□□ -0.56
LTBR-215ENST00000546296 NBDYA0A0U1RRE5 68 aa11.55□□□□□ -0.56
LTBR-215ENST00000546296 FAM231BA6NCW3 169 aa11.55□□□□□ -0.56
LTBR-215ENST00000546296 HIGD1CA8MV81 97 aa11.55□□□□□ -0.56
LTBR-215ENST00000546296 SIVA1O15304 175 aa11.55□□□□□ -0.56
LTBR-215ENST00000546296 TIRAPP58753 221 aa11.55□□□□□ -0.56
LTBR-215ENST00000546296 GTSF1LQ9H1H1 148 aa11.55□□□□□ -0.56
LTBR-215ENST00000546296 DPH3P1Q9H4G8 78 aa11.55□□□□□ -0.56
LTBR-215ENST00000546296 LINC00315P59091 139 aa11.54□□□□□ -0.56
LTBR-215ENST00000546296 COMMD7Q86VX2 200 aa11.54□□□□□ -0.56
LTBR-215ENST00000546296 DNAH6Q9C0G6 4158 aa11.54□□□□□ -0.56
LTBR-215ENST00000546296 TRBV7-3A0A075B6L6 115 aa11.53□□□□□ -0.56
LTBR-215ENST00000546296 TRAV8-6A0A0B4J262 113 aa11.53□□□□□ -0.56
LTBR-215ENST00000546296 A0A1B0GUT8 65 aa11.53□□□□□ -0.56
LTBR-215ENST00000546296 H7C1H1 209 aa11.53□□□□□ -0.56
LTBR-215ENST00000546296 OR10J3Q5JRS4 329 aa11.53□□□□□ -0.56
LTBR-215ENST00000546296 Q6ZR54 194 aa11.53□□□□□ -0.56
LTBR-215ENST00000546296 NAT8BQ9UHF3 227 aa11.53□□□□□ -0.56
LTBR-215ENST00000546296 LINC00694P0DN24 101 aa11.52□□□□□ -0.57
LTBR-215ENST00000546296 PNRC1Q12796 327 aaPredicted RBP11.52□□□□□ -0.57
LTBR-215ENST00000546296 TTC32Q5I0X7 151 aa11.52□□□□□ -0.57
LTBR-215ENST00000546296 SUMO4Q6EEV6 95 aa11.52□□□□□ -0.57
LTBR-215ENST00000546296 TMEM218A2RU14 115 aa11.51□□□□□ -0.57
LTBR-215ENST00000546296 F8W036 122 aa11.51□□□□□ -0.57
LTBR-215ENST00000546296 PPP1R2P9O14990 202 aa11.51□□□□□ -0.57
LTBR-215ENST00000546296 RIGQ13278 110 aa11.51□□□□□ -0.57
LTBR-215ENST00000546296 LELP1Q5T871 98 aa11.51□□□□□ -0.57
LTBR-215ENST00000546296 WFDC10BQ8IUB3 73 aa11.51□□□□□ -0.57
LTBR-215ENST00000546296 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.51□□□□□ -0.57
LTBR-215ENST00000546296 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
LTBR-215ENST00000546296 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
LTBR-215ENST00000546296 TNFRSF18Q9Y5U5 241 aa11.51□□□□□ -0.57
LTBR-215ENST00000546296 TRAV9-2A0A087WT02 112 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms