RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ODF1Q14990 250 aa9.29□□□□□ -0.92
RTN3-214ENST00000545432 C15orf54Q8N8G6 183 aa9.29□□□□□ -0.92
RTN3-214ENST00000545432 RPL36ALQ969Q0 106 aaKnown RBP9.29□□□□□ -0.92
RTN3-214ENST00000545432 EPDR1Q9UM22 224 aa9.29□□□□□ -0.92
RTN3-214ENST00000545432 TMEM262E9PQX1 116 aa9.28□□□□□ -0.92
RTN3-214ENST00000545432 K7EQM0 130 aa9.28□□□□□ -0.92
RTN3-214ENST00000545432 ZFP69Q49AA0 526 aa9.28□□□□□ -0.92
RTN3-214ENST00000545432 SPACA4Q8TDM5 124 aa9.28□□□□□ -0.92
RTN3-214ENST00000545432 NDUFA13Q9P0J0 144 aa9.28□□□□□ -0.92
RTN3-214ENST00000545432 HSPB11Q9Y547 144 aa9.28□□□□□ -0.92
RTN3-214ENST00000545432 A0A1W2PPV4 95 aa9.27□□□□□ -0.93
RTN3-214ENST00000545432 SLPIP03973 132 aa9.27□□□□□ -0.93
RTN3-214ENST00000545432 ARMS2P0C7Q2 107 aa9.27□□□□□ -0.93
RTN3-214ENST00000545432 STAG3L2P0CL84 134 aa9.27□□□□□ -0.93
RTN3-214ENST00000545432 STAG3L3P0CL85 134 aa9.27□□□□□ -0.93
RTN3-214ENST00000545432 CYCSP99999 105 aaKnown RBP9.27□□□□□ -0.93
RTN3-214ENST00000545432 COX8CQ7Z4L0 72 aa9.27□□□□□ -0.93
RTN3-214ENST00000545432 PRNTQ86SH4 94 aa9.27□□□□□ -0.93
RTN3-214ENST00000545432 SCGB1C1Q8TD33 95 aa9.27□□□□□ -0.93
RTN3-214ENST00000545432 SIX6O95475 246 aa9.26□□□□□ -0.93
RTN3-214ENST00000545432 HLA-DQA1P01909 254 aa9.26□□□□□ -0.93
RTN3-214ENST00000545432 ANGP03950 147 aaKnown RBP9.26□□□□□ -0.93
RTN3-214ENST00000545432 RAB2AP61019 212 aa9.26□□□□□ -0.93
RTN3-214ENST00000545432 PKIAP61925 76 aa9.26□□□□□ -0.93
RTN3-214ENST00000545432 SUMO1P63165 101 aaKnown RBP9.26□□□□□ -0.93
RTN3-214ENST00000545432 PRR27Q6MZM9 219 aa9.26□□□□□ -0.93
RTN3-214ENST00000545432 A0A087WWL8 130 aa9.25□□□□□ -0.93
RTN3-214ENST00000545432 KRBOX1C9JBD0 128 aa9.25□□□□□ -0.93
RTN3-214ENST00000545432 PHOX2AO14813 284 aa9.25□□□□□ -0.93
RTN3-214ENST00000545432 ARL14EPLP0DKL9 152 aa9.25□□□□□ -0.93
RTN3-214ENST00000545432 CRIP1P50238 77 aa9.25□□□□□ -0.93
RTN3-214ENST00000545432 FAM74A4Q5TZK3 123 aa9.25□□□□□ -0.93
RTN3-214ENST00000545432 OR11H4Q8NGC9 324 aa9.25□□□□□ -0.93
RTN3-214ENST00000545432 CCDC32Q9BV29 185 aa9.25□□□□□ -0.93
RTN3-214ENST00000545432 DPH3P1Q9H4G8 78 aa9.25□□□□□ -0.93
RTN3-214ENST00000545432 WFDC1Q9HC57 220 aa9.25□□□□□ -0.93
RTN3-214ENST00000545432 LPAP08519 4548 aa9.24□□□□□ -0.93
RTN3-214ENST00000545432 IGHV3-64A0A075B6Q5 118 aa9.24□□□□□ -0.93
RTN3-214ENST00000545432 B4DEV8 164 aa9.24□□□□□ -0.93
RTN3-214ENST00000545432 H3BVH4 76 aa9.24□□□□□ -0.93
RTN3-214ENST00000545432 HMGB3O15347 200 aaKnown RBP9.24□□□□□ -0.93
RTN3-214ENST00000545432 WDR73Q6P4I2 378 aa9.24□□□□□ -0.93
RTN3-214ENST00000545432 VAX2Q9UIW0 290 aa9.24□□□□□ -0.93
RTN3-214ENST00000545432 CHTF8P0CG12 524 aa9.23□□□□□ -0.93
RTN3-214ENST00000545432 GCHFRP30047 84 aa9.23□□□□□ -0.93
RTN3-214ENST00000545432 RBX1P62877 108 aa9.23□□□□□ -0.93
RTN3-214ENST00000545432 LRRC37A5PQ49AS3 106 aa9.23□□□□□ -0.93
RTN3-214ENST00000545432 NTM-AS1Q6ZSK4 140 aa9.23□□□□□ -0.93
RTN3-214ENST00000545432 NEXN-AS1Q8NBZ9 246 aa9.23□□□□□ -0.93
RTN3-214ENST00000545432 PPP1R1CQ8WVI7 109 aa9.23□□□□□ -0.93
RTN3-214ENST00000545432 KIF25-AS1Q9Y6Z4 181 aa9.23□□□□□ -0.93
RTN3-214ENST00000545432 FAM240BA0A1B0GVZ2 78 aa9.22□□□□□ -0.93
RTN3-214ENST00000545432 PTTG1O95997 202 aa9.22□□□□□ -0.93
RTN3-214ENST00000545432 RPL12P30050 165 aaKnown RBP9.22□□□□□ -0.93
RTN3-214ENST00000545432 H2BFSP57053 126 aa9.22□□□□□ -0.93
RTN3-214ENST00000545432 RAB4BP61018 213 aa9.22□□□□□ -0.93
RTN3-214ENST00000545432 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
RTN3-214ENST00000545432 MZT2BQ6NZ67 158 aa9.22□□□□□ -0.93
RTN3-214ENST00000545432 ARL2-SNX15V9GYD0 113 aa9.22□□□□□ -0.93
RTN3-214ENST00000545432 MPC2O95563 127 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 CDC34P49427 236 aaPredicted RBP9.21□□□□□ -0.94
RTN3-214ENST00000545432 PRR3P79522 188 aaKnown RBP9.21□□□□□ -0.94
RTN3-214ENST00000545432 TMEM97Q5BJF2 176 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 LINC00299Q6ZSB3 139 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 LINC00269Q8N2A0 174 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 C7orf33Q8WU49 177 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 RAB24Q969Q5 203 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 CHCHD5Q9BSY4 110 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 KRTAP9-2Q9BYQ4 174 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 SMIM3Q9BZL3 60 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 TMEM167BQ9NRX6 74 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 PHLDA3Q9Y5J5 127 aa9.21□□□□□ -0.94
RTN3-214ENST00000545432 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.2□□□□□ -0.94
RTN3-214ENST00000545432 TRAV34A0A0B4J273 112 aa9.2□□□□□ -0.94
RTN3-214ENST00000545432 A0A1W2PRE2 83 aa9.2□□□□□ -0.94
RTN3-214ENST00000545432 SPINK6Q6UWN8 80 aa9.2□□□□□ -0.94
RTN3-214ENST00000545432 ZFP82Q8N141 532 aa9.2□□□□□ -0.94
RTN3-214ENST00000545432 DPH3Q96FX2 82 aa9.2□□□□□ -0.94
RTN3-214ENST00000545432 MUC2Q02817 5179 aa9.2□□□□□ -0.94
RTN3-214ENST00000545432 TRAV8-4A0A0B4J246 113 aa9.19□□□□□ -0.94
RTN3-214ENST00000545432 hDV102S1A0JD36 115 aa9.19□□□□□ -0.94
RTN3-214ENST00000545432 GRIFINA4D1Z8 144 aa9.19□□□□□ -0.94
RTN3-214ENST00000545432 P01737 135 aa9.19□□□□□ -0.94
RTN3-214ENST00000545432 GZMBP10144 247 aa9.19□□□□□ -0.94
RTN3-214ENST00000545432 TPT1P13693 172 aaKnown RBP9.19□□□□□ -0.94
RTN3-214ENST00000545432 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
RTN3-214ENST00000545432 S100ZQ8WXG8 99 aa9.19□□□□□ -0.94
RTN3-214ENST00000545432 M0R381 172 aa9.18□□□□□ -0.94
RTN3-214ENST00000545432 REG3AQ06141 175 aa9.18□□□□□ -0.94
RTN3-214ENST00000545432 IQCJQ1A5X6 159 aa9.18□□□□□ -0.94
RTN3-214ENST00000545432 ZNF674Q2M3X9 581 aa9.18□□□□□ -0.94
RTN3-214ENST00000545432 Q86TA4 180 aa9.18□□□□□ -0.94
RTN3-214ENST00000545432 SH2D1AO60880 128 aa9.17□□□□□ -0.94
RTN3-214ENST00000545432 CXorf1O96002 111 aa9.17□□□□□ -0.94
RTN3-214ENST00000545432 REG3GQ6UW15 175 aa9.17□□□□□ -0.94
RTN3-214ENST00000545432 ENKURQ8TC29 256 aa9.17□□□□□ -0.94
RTN3-214ENST00000545432 AP5S1Q9NUS5 200 aa9.17□□□□□ -0.94
RTN3-214ENST00000545432 ZFP30Q9Y2G7 519 aa9.17□□□□□ -0.94
RTN3-214ENST00000545432 TRBV6-1A0A0K0K1D8 114 aa9.16□□□□□ -0.94
RTN3-214ENST00000545432 A0A1B0GUV1 79 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms