RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	IGHV3OR16-8	A0A075B7F1	116 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	ZNF207	O43670	478 aa	Known RBP	4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	CXorf1	O96002	111 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	HBE1	P02100	147 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	TRGC1	P0CF51	173 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	HIST1H1E	P10412	219 aa	Known RBP	4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	ID1	P41134	155 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	SULT1A2	P50226	295 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	SNRPD3	P62318	126 aa	Known RBP	4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	PDZD11	Q5EBL8	140 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	LCN15	Q6UWW0	184 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	OR4B1	Q8NGF8	309 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	UHRF2	Q96PU4	802 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	SLC50A1	Q9BRV3	221 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	SH3BGRL3	Q9H299	93 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	SLC25A22	Q9H936	323 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	TMEM167B	Q9NRX6	74 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	RPRM	Q9NS64	109 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	FAT3	Q8TDW7	4589 aa		4.76	□□□□□ -1.65
LDHA-223	ENST00000545215	TRAV26-1	A0A087WT03	109 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	TRAV1-1	A0A0B4J248	108 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	TRBV7-9	A0A0J9YWB2	115 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	SLC17A3	O00476	420 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	ISLR	O14498	428 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	IGLC2	P0DOY2	106 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	PSMB3	P49720	205 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	PSG9	Q00887	426 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	VAMP3	Q15836	100 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	C5orf47	Q569G3	176 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	GCSAML	Q5JQS6	135 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	CD164L2	Q6UWJ8	174 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	C9orf47	Q6ZRZ4	202 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	MIR17HG	Q75NE6	70 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	STH	Q8IWL8	128 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	C6orf223	Q8N319	242 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	MBD3L1	Q8WWY6	194 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	MRAP2	Q96G30	205 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	BTF3L4	Q96K17	158 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	PAXX	Q9BUH6	204 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	VAMP8	Q9BV40	100 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	SCRT1	Q9BWW7	348 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	UQCR10	Q9UDW1	63 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	NAT8	Q9UHE5	227 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	URGCP-MRPS24	S4R325	110 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	ARL2-SNX15	V9GYD0	113 aa		4.75	□□□□□ -1.65
LDHA-223	ENST00000545215	IGHV3OR16-13	A0A075B7E8	117 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	IGHV3-49	A0A0A0MS15	119 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	IGHV3-74	A0A0B4J1X5	117 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	IGHV3-66	A0A0C4DH42	116 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	MAP1LC3B2	A6NCE7	125 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	FBLL1	A6NHQ2	334 aa	Known RBP	4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	MRPS12	O15235	138 aa	Known RBP	4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	TSPAN13	O95857	204 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	ZNF705D	P0CH99	300 aa	Predicted RBP	4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	ZNF705B	P0CI00	300 aa	Predicted RBP	4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	HERV-K104	P63124	156 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	UBE2L3	P68036	154 aa	Known RBP	4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	SPATA31B1P	Q5VZV4	182 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	TEX43	Q6ZNM6	134 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	FAM213B	Q8TBF2	198 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	MRPL53	Q96EL3	112 aa	Known RBP	4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	FAM167A-AS1	Q96KT0	104 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	IMMP2L	Q96T52	175 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	SIGMAR1	Q99720	223 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	TXNDC17	Q9BRA2	123 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	SLC25A2	Q9BXI2	301 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	MAP1LC3B	Q9GZQ8	125 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	SLC35B3	Q9H1N7	401 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	MS4A6A	Q9H2W1	248 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	TMEM242	Q9NWH2	141 aa		4.74	□□□□□ -1.65
LDHA-223	ENST00000545215	TRBV19	A0A075B6N1	114 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215		A0A1W2PRE2	83 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215		J3QR89	54 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215		K7EQG2	157 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	PDE6D	O43924	150 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	IFNA1	P01562	189 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	TRGC2	P03986	189 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	ARL14EPL	P0DKL9	152 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	ESD	P10768	282 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	GCHFR	P30047	84 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	HNRNPA3	P51991	378 aa	Known RBP	4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	ELOB	Q15370	118 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	DEFB135	Q30KP9	77 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	GFI1B	Q5VTD9	330 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	DCANP1	Q8TF63	244 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	ZNF586	Q9NXT0	402 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	LAMTOR2	Q9Y2Q5	125 aa		4.73	□□□□□ -1.65
LDHA-223	ENST00000545215	TRBV24-1	A0A075B6N3	115 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	IGLV9-49	A0A0B4J1Y8	123 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	TRAV5	A0A0B4J249	113 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215		K7EQM0	130 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	SOCS3	O14543	225 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	CSN1S1	P47710	185 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	APOC4	P55056	127 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	ZNF726P1	Q15940	193 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	GTF2H5	Q6ZYL4	71 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	COX8C	Q7Z4L0	72 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms