RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 NLRP1Q9C000 1473 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 NCKAP5O14513 1909 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 KIDINS220Q9ULH0 1771 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 CLIP1P30622 1438 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 CPSF1Q10570 1443 aaKnown RBP1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 MPDZO75970 2070 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 ADGRB3O60242 1522 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 PRDM15P57071 1507 aaPredicted RBP1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 ABCA10Q8WWZ4 1543 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 KIF13AQ9H1H9 1805 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 IGKV3-7A0A075B6H7 116 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 LOC110117498A0A087WWA1 95 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 HCG22E2RYF7 251 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 SSBP1Q04837 148 aaKnown RBP1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 MGST2Q99735 147 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 SNHG12Q9BXW3 62 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 UQCR10Q9UDW1 63 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 DIDO1Q9BTC0 2240 aaKnown RBP1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 ANKRD36BQ8N2N9 1353 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 RB1CC1Q8TDY2 1594 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 RP1P56715 2156 aa1.92□□□□□ -2.1
GTF2H3-213ENST00000543415 WDR97A6NE52 1622 aa1.91□□□□□ -2.1
GTF2H3-213ENST00000543415 STRCQ7RTU9 1775 aa1.91□□□□□ -2.1
GTF2H3-213ENST00000543415 ABCC10Q5T3U5 1492 aa1.91□□□□□ -2.1
GTF2H3-213ENST00000543415 RBAKDNA6NC62 111 aa1.91□□□□□ -2.1
GTF2H3-213ENST00000543415 GNGT2O14610 69 aa1.91□□□□□ -2.1
GTF2H3-213ENST00000543415 NDUFC1O43677 76 aa1.91□□□□□ -2.1
GTF2H3-213ENST00000543415 SIX6O95475 246 aa1.91□□□□□ -2.1
GTF2H3-213ENST00000543415 C15orf53Q8NAA6 179 aa1.91□□□□□ -2.1
GTF2H3-213ENST00000543415 ZNF563Q8TA94 476 aa1.91□□□□□ -2.1
GTF2H3-213ENST00000543415 LIMD2Q9BT23 127 aa1.91□□□□□ -2.1
GTF2H3-213ENST00000543415 CUL7Q14999 1698 aa1.9□□□□□ -2.1
GTF2H3-213ENST00000543415 ADAMTS7Q9UKP4 1686 aa1.9□□□□□ -2.1
GTF2H3-213ENST00000543415 TEX14Q8IWB6 1497 aa1.9□□□□□ -2.11
GTF2H3-213ENST00000543415 TRBV7-1A0A0A6YYK4 115 aa1.9□□□□□ -2.11
GTF2H3-213ENST00000543415 MPC2O95563 127 aa1.9□□□□□ -2.11
GTF2H3-213ENST00000543415 IGLV3-1P01715 115 aa1.9□□□□□ -2.11
GTF2H3-213ENST00000543415 RPL37AP61513 92 aaKnown RBP1.9□□□□□ -2.11
GTF2H3-213ENST00000543415 C10orf128Q5T292 105 aa1.9□□□□□ -2.11
GTF2H3-213ENST00000543415 Q6ZRN7 208 aaPredicted RBP1.9□□□□□ -2.11
GTF2H3-213ENST00000543415 FAIMQ9NVQ4 179 aa1.9□□□□□ -2.11
GTF2H3-213ENST00000543415 C10orf71Q711Q0 1435 aa1.9□□□□□ -2.11
GTF2H3-213ENST00000543415 CASZ1Q86V15 1759 aa1.9□□□□□ -2.11
GTF2H3-213ENST00000543415 TTC37Q6PGP7 1564 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 KIAA1549LQ6ZVL6 1849 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 FYCO1Q9BQS8 1478 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 LOC285095A0A1B0GVY8 99 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 HCRTO43612 131 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 GYPAP02724 150 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 TFF1P04155 84 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 ASIPP42127 132 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 XAF1Q6GPH4 301 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 UNQ6190/PRO20217Q6UXQ8 127 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 ODF3Q96PU9 254 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 AMELYQ99218 206 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 KIF21AQ7Z4S6 1674 aa1.89□□□□□ -2.11
GTF2H3-213ENST00000543415 MICAL3Q7RTP6 2002 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 MUC4Q99102 2169 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 ZMYM4Q5VZL5 1548 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 CRYM-AS1A6NIL9 109 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 ATOX1O00244 68 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 FXYD4P59646 89 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 ELOF1P60002 83 aaKnown RBP1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 DEFB103AP81534 67 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 DEFB119Q8N690 84 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 C10orf82Q8WW14 230 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 ZNF625Q96I27 306 aaPredicted RBP1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 PMCHL2Q9BQD1 86 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 LINC00312Q9Y6C7 94 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 KIAA1549Q9HCM3 1950 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 NCOA2Q15596 1464 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 FANCD2Q9BXW9 1451 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 SHROOM2Q13796 1616 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 ABCA5Q8WWZ7 1642 aa1.88□□□□□ -2.11
GTF2H3-213ENST00000543415 RTTNQ86VV8 2226 aa1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 TOP2AP11388 1531 aaKnown RBP1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 ARHGAP5Q13017 1502 aa1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 IGKV2-29A2NJV5 120 aaPredicted RBP1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 Q6ZQY7 126 aa1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 V9GYV3 84 aa1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 ATG2AQ2TAZ0 1938 aa1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 LRP5O75197 1615 aa1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 GOLGA3Q08378 1498 aa1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 CDK12Q9NYV4 1490 aaPredicted RBP1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 MED12LQ86YW9 2145 aa1.87□□□□□ -2.11
GTF2H3-213ENST00000543415 ALPK2Q86TB3 2170 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 CITO14578 2027 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 TROQ12816 1431 aaPredicted RBP1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 RBBP6Q7Z6E9 1792 aaKnown RBP1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 FXYD1O00168 92 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 COX6CP09669 75 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 CAV3P56539 151 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 SEC11AP67812 179 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 ZNF56Q15929 161 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 SPRNQ5BIV9 151 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 C20orf197Q8N268 126 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 COX7B2Q8TF08 81 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 MANBALQ9NQG1 85 aa1.86□□□□□ -2.11
GTF2H3-213ENST00000543415 R4GMQ9 66 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms