RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 LINC01551Q86U37 167 aa12.68□□□□□ -0.38
COPS7A-216ENST00000543170 RNASE7Q9H1E1 156 aaKnown RBP12.68□□□□□ -0.38
COPS7A-216ENST00000543170 LOC100131303A0A0U1RQF7 123 aa12.67□□□□□ -0.38
COPS7A-216ENST00000543170 F2Z2F3 143 aa12.67□□□□□ -0.38
COPS7A-216ENST00000543170 GZMBP10144 247 aa12.67□□□□□ -0.38
COPS7A-216ENST00000543170 CACNG7P62955 275 aa12.67□□□□□ -0.38
COPS7A-216ENST00000543170 FAM74A4Q5TZK3 123 aa12.67□□□□□ -0.38
COPS7A-216ENST00000543170 Q6ZR54 194 aa12.67□□□□□ -0.38
COPS7A-216ENST00000543170 DNAH2Q9P225 4427 aa12.66□□□□□ -0.38
COPS7A-216ENST00000543170 A0A087WWL8 130 aa12.66□□□□□ -0.38
COPS7A-216ENST00000543170 C9JQL5 133 aa12.66□□□□□ -0.38
COPS7A-216ENST00000543170 CTRLP40313 264 aa12.66□□□□□ -0.38
COPS7A-216ENST00000543170 TIRAPP58753 221 aa12.66□□□□□ -0.38
COPS7A-216ENST00000543170 SRSF3P84103 164 aaKnown RBP12.66□□□□□ -0.38
COPS7A-216ENST00000543170 CT83Q5H943 113 aa12.66□□□□□ -0.38
COPS7A-216ENST00000543170 LYPD5Q6UWN5 251 aa12.66□□□□□ -0.38
COPS7A-216ENST00000543170 AP1S3Q96PC3 154 aa12.66□□□□□ -0.38
COPS7A-216ENST00000543170 FRAS1Q86XX4 4008 aa12.65□□□□□ -0.38
COPS7A-216ENST00000543170 IGLV2-18A0A075B6J9 118 aa12.65□□□□□ -0.38
COPS7A-216ENST00000543170 LINC00694P0DN24 101 aa12.65□□□□□ -0.38
COPS7A-216ENST00000543170 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
COPS7A-216ENST00000543170 Q6ZSN1 163 aa12.65□□□□□ -0.38
COPS7A-216ENST00000543170 TPPP3Q9BW30 176 aa12.65□□□□□ -0.38
COPS7A-216ENST00000543170 CNFNQ9BYD5 112 aa12.65□□□□□ -0.38
COPS7A-216ENST00000543170 Q9H8V8 135 aa12.65□□□□□ -0.38
COPS7A-216ENST00000543170 GATCO43716 136 aaKnown RBP12.64□□□□□ -0.39
COPS7A-216ENST00000543170 WDR73Q6P4I2 378 aa12.64□□□□□ -0.39
COPS7A-216ENST00000543170 MUC21A0A0G2JKD1 596 aa12.63□□□□□ -0.39
COPS7A-216ENST00000543170 NBDYA0A0U1RRE5 68 aa12.63□□□□□ -0.39
COPS7A-216ENST00000543170 MUC21A0A140T8X8 626 aa12.63□□□□□ -0.39
COPS7A-216ENST00000543170 ERVFC1-1P60608 527 aa12.63□□□□□ -0.39
COPS7A-216ENST00000543170 RAB4BP61018 213 aa12.63□□□□□ -0.39
COPS7A-216ENST00000543170 TMEM241Q24JQ0 296 aa12.63□□□□□ -0.39
COPS7A-216ENST00000543170 TTC32Q5I0X7 151 aa12.63□□□□□ -0.39
COPS7A-216ENST00000543170 LYZL1Q6UWQ5 148 aa12.63□□□□□ -0.39
COPS7A-216ENST00000543170 C14orf178Q8N769 122 aaPredicted RBP12.63□□□□□ -0.39
COPS7A-216ENST00000543170 NAT8Q9UHE5 227 aa12.63□□□□□ -0.39
COPS7A-216ENST00000543170 TRBV10-1A0A0K0K1A3 114 aa12.62□□□□□ -0.39
COPS7A-216ENST00000543170 A8MWL6 223 aa12.62□□□□□ -0.39
COPS7A-216ENST00000543170 IFITM2Q01629 132 aa12.62□□□□□ -0.39
COPS7A-216ENST00000543170 OSTCQ9NRP0 149 aa12.62□□□□□ -0.39
COPS7A-216ENST00000543170 KIF25-AS1Q9Y6Z4 181 aa12.62□□□□□ -0.39
COPS7A-216ENST00000543170 M0R2N4 97 aa12.61□□□□□ -0.39
COPS7A-216ENST00000543170 ISOC2Q96AB3 205 aa12.61□□□□□ -0.39
COPS7A-216ENST00000543170 SIVA1O15304 175 aa12.6□□□□□ -0.39
COPS7A-216ENST00000543170 TRGC1P0CF51 173 aa12.6□□□□□ -0.39
COPS7A-216ENST00000543170 SMIM17P0DL12 118 aa12.6□□□□□ -0.39
COPS7A-216ENST00000543170 FOXA3P55318 350 aaPredicted RBP12.6□□□□□ -0.39
COPS7A-216ENST00000543170 RPL23P62829 140 aaKnown RBP12.6□□□□□ -0.39
COPS7A-216ENST00000543170 ZNF56Q15929 161 aa12.6□□□□□ -0.39
COPS7A-216ENST00000543170 SOHLH1Q5JUK2 328 aa12.6□□□□□ -0.39
COPS7A-216ENST00000543170 ATP6V0E2Q8NHE4 81 aa12.6□□□□□ -0.39
COPS7A-216ENST00000543170 GTSF1Q8WW33 167 aa12.6□□□□□ -0.39
COPS7A-216ENST00000543170 GFRA4Q9GZZ7 299 aa12.6□□□□□ -0.39
COPS7A-216ENST00000543170 EPPK1P58107 5090 aaKnown RBP12.6□□□□□ -0.39
COPS7A-216ENST00000543170 DNAH17Q9UFH2 4485 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 FAM231BA6NCW3 169 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 GAGE12JA6NER3 117 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 GAGE1Q13065 139 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 GAGE4Q13068 117 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 GAGE5Q13069 117 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 GAGE13Q4V321 117 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 C15orf54Q8N8G6 183 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 OR10G8Q8NGN5 311 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 GTSF1LQ9H1H1 148 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 MSRB1Q9NZV6 116 aa12.59□□□□□ -0.39
COPS7A-216ENST00000543170 BTF3P20290 206 aaKnown RBP12.58□□□□□ -0.4
COPS7A-216ENST00000543170 NTF3P20783 257 aa12.58□□□□□ -0.4
COPS7A-216ENST00000543170 LINC00315P59091 139 aa12.58□□□□□ -0.4
COPS7A-216ENST00000543170 SSTP61278 116 aa12.58□□□□□ -0.4
COPS7A-216ENST00000543170 TSKUQ8WUA8 353 aa12.58□□□□□ -0.4
COPS7A-216ENST00000543170 FAT2Q9NYQ8 4349 aa12.58□□□□□ -0.4
COPS7A-216ENST00000543170 K7EP13 123 aa12.57□□□□□ -0.4
COPS7A-216ENST00000543170 RPL36AP83881 106 aaKnown RBP12.57□□□□□ -0.4
COPS7A-216ENST00000543170 ADIRFQ15847 76 aa12.57□□□□□ -0.4
COPS7A-216ENST00000543170 LELP1Q5T871 98 aa12.57□□□□□ -0.4
COPS7A-216ENST00000543170 LINC00336Q6ZUF6 198 aa12.57□□□□□ -0.4
COPS7A-216ENST00000543170 RPL36ALQ969Q0 106 aaKnown RBP12.57□□□□□ -0.4
COPS7A-216ENST00000543170 Q9UF83 564 aa12.57□□□□□ -0.4
COPS7A-216ENST00000543170 V9GYV3 84 aa12.57□□□□□ -0.4
COPS7A-216ENST00000543170 C1orf134Q5TEV5 83 aa12.56□□□□□ -0.4
COPS7A-216ENST00000543170 DPH3P1Q9H4G8 78 aa12.56□□□□□ -0.4
COPS7A-216ENST00000543170 TRBV7-3A0A075B6L6 115 aa12.55□□□□□ -0.4
COPS7A-216ENST00000543170 DNAH10OSP0CZ25 163 aa12.55□□□□□ -0.4
COPS7A-216ENST00000543170 EVI2AP22794 236 aa12.55□□□□□ -0.4
COPS7A-216ENST00000543170 TWIST1Q15672 202 aa12.55□□□□□ -0.4
COPS7A-216ENST00000543170 WFDC10BQ8IUB3 73 aa12.55□□□□□ -0.4
COPS7A-216ENST00000543170 KRTAP1-5Q9BYS1 174 aa12.55□□□□□ -0.4
COPS7A-216ENST00000543170 TRAV8-6A0A0B4J262 113 aa12.54□□□□□ -0.4
COPS7A-216ENST00000543170 HIGD1CA8MV81 97 aa12.54□□□□□ -0.4
COPS7A-216ENST00000543170 F5H697 171 aa12.54□□□□□ -0.4
COPS7A-216ENST00000543170 RTL8CO15255 209 aa12.54□□□□□ -0.4
COPS7A-216ENST00000543170 UBE2D3P61077 147 aa12.54□□□□□ -0.4
COPS7A-216ENST00000543170 UBE2D2P62837 147 aa12.54□□□□□ -0.4
COPS7A-216ENST00000543170 C6orf223Q8N319 242 aa12.54□□□□□ -0.4
COPS7A-216ENST00000543170 NEXN-AS1Q8NBZ9 246 aa12.54□□□□□ -0.4
COPS7A-216ENST00000543170 A0A087WWC5 75 aa12.53□□□□□ -0.4
COPS7A-216ENST00000543170 H7C1H1 209 aa12.53□□□□□ -0.4
COPS7A-216ENST00000543170 MGPP08493 103 aa12.53□□□□□ -0.4
COPS7A-216ENST00000543170 UQCC3Q6UW78 93 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms