RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 LINC00474Q9P2X8 69 aa1.84□□□□□ -2.11
GTF2H3-210ENST00000543005 AP4S1Q9Y587 144 aa1.84□□□□□ -2.11
GTF2H3-210ENST00000543005 LAMC3Q9Y6N6 1575 aa1.84□□□□□ -2.12
GTF2H3-210ENST00000543005 SIP14410 1827 aa1.84□□□□□ -2.12
GTF2H3-210ENST00000543005 PATJQ8NI35 1801 aa1.84□□□□□ -2.12
GTF2H3-210ENST00000543005 BRWD1Q9NSI6 2320 aa1.84□□□□□ -2.12
GTF2H3-210ENST00000543005 PCNX2A6NKB5 2137 aa1.84□□□□□ -2.12
GTF2H3-210ENST00000543005 TNS1Q9HBL0 1735 aaKnown RBP1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 TRGV4A0A0C4DH28 118 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 H3BQ15 152 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 IGLV3-19P01714 112 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 CCKP06307 115 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 LINC00032P0C843 101 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 RNASE2P10153 161 aaKnown RBP1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 LINC00304Q8N9R0 145 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 SPTSSBQ8NFR3 76 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 ODF3Q96PU9 254 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 TTTY12Q9BZ98 90 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 MYH8P13535 1937 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 SHROOM3Q8TF72 1996 aa1.83□□□□□ -2.12
GTF2H3-210ENST00000543005 PARP14Q460N5 1801 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 SBF2Q86WG5 1849 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 PTPRDP23468 1912 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 TRBV10-3A0A0K0K1G6 114 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 TRBV6-4A0A1B0GX49 114 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 NUPR2A6NF83 97 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 GNGT2O14610 69 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 RPL7L1Q6DKI1 246 aaKnown RBP1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 HCP5Q6MZN7 132 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 C4orf3Q8WVX3 66 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 NPVFQ9HCQ7 196 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 C22orf24Q9Y442 160 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 MON2Q7Z3U7 1717 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 NWD2Q9ULI1 1742 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 MARF1Q9Y4F3 1742 aaKnown RBP1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 ANKRD36BQ8N2N9 1353 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 SHANK2Q9UPX8 1470 aa1.82□□□□□ -2.12
GTF2H3-210ENST00000543005 ABCC3O15438 1527 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 ZNF142P52746 1687 aaPredicted RBP1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 IGKV3-7A0A075B6H7 116 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 hADV29S1A0JD25 119 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 H3BRM9 83 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 NUPR1O60356 82 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 IGKV1-17P01599 117 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 LCN9Q8WX39 176 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 IFI27L1Q96BM0 104 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 TXNDC17Q9BRA2 123 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 ATG5Q9H1Y0 275 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 MRPL35Q9NZE8 188 aaKnown RBP1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 CR1P17927 2039 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 GOLGA3Q08378 1498 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 NINQ8N4C6 2090 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 MED12LQ86YW9 2145 aa1.81□□□□□ -2.12
GTF2H3-210ENST00000543005 TRAV13-2A0A0B4J235 113 aa1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 TRAV12-3A0A0B4J271 114 aa1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 A0A0J9YY99 117 aa1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 TRBV10-1A0A0K0K1A3 114 aa1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 HCG22E2RYF7 251 aa1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 H3BQF6 201 aa1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 SNRNP200O75643 2136 aaKnown RBP1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 FAM74A1Q5RGS3 127 aa1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 Q6ZRN7 208 aaPredicted RBP1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 PMCHL2Q9BQD1 86 aa1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 MRPL36Q9P0J6 103 aaKnown RBP1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 CDK12Q9NYV4 1490 aaPredicted RBP1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 PRDM15P57071 1507 aaPredicted RBP1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 COL5A3P25940 1745 aaPredicted RBP1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 STRCP1A6NGW2 1772 aa1.8□□□□□ -2.12
GTF2H3-210ENST00000543005 TNRC6AQ8NDV7 1962 aaKnown RBP1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 MYOFQ9NZM1 2061 aa1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 PIGBOS1A0A0B4J2F0 54 aa1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 A6NIN4 97 aa1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 PPYP01298 95 aa1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 IGLV3-1P01715 115 aa1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 LINC00299Q6ZSB3 139 aa1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 FAM213BQ8TBF2 198 aa1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 DMAC1Q96GE9 116 aa1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 REG4Q9BYZ8 158 aa1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 CASP8AP2Q9UKL3 1982 aa1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 BAZ2BQ9UIF8 2168 aaKnown RBP1.79□□□□□ -2.12
GTF2H3-210ENST00000543005 UNC13CQ8NB66 2214 aa1.78□□□□□ -2.12
GTF2H3-210ENST00000543005 MAP3K1Q13233 1512 aa1.78□□□□□ -2.12
GTF2H3-210ENST00000543005 CCL8P80075 99 aa1.78□□□□□ -2.12
GTF2H3-210ENST00000543005 COA5Q86WW8 74 aa1.78□□□□□ -2.12
GTF2H3-210ENST00000543005 NDUFA11Q86Y39 141 aa1.78□□□□□ -2.12
GTF2H3-210ENST00000543005 C15orf53Q8NAA6 179 aa1.78□□□□□ -2.12
GTF2H3-210ENST00000543005 TSLPQ969D9 159 aa1.78□□□□□ -2.12
GTF2H3-210ENST00000543005 DOCK10Q96BY6 2186 aa1.78□□□□□ -2.13
GTF2H3-210ENST00000543005 TANC1Q9C0D5 1861 aa1.77□□□□□ -2.13
GTF2H3-210ENST00000543005 KDM5DQ9BY66 1539 aa1.77□□□□□ -2.13
GTF2H3-210ENST00000543005 JMJD7-PLA2G4BH0Y9G9 81 aa1.77□□□□□ -2.13
GTF2H3-210ENST00000543005 IGHV3-30P01768 117 aa1.77□□□□□ -2.13
GTF2H3-210ENST00000543005 IGHV3-30-5P0DP03 117 aa1.77□□□□□ -2.13
GTF2H3-210ENST00000543005 UBE2D1P51668 147 aa1.77□□□□□ -2.13
GTF2H3-210ENST00000543005 GNG11P61952 73 aa1.77□□□□□ -2.13
GTF2H3-210ENST00000543005 KLK9Q9UKQ9 250 aa1.77□□□□□ -2.13
GTF2H3-210ENST00000543005 FN1P02751 2386 aaKnown RBP1.77□□□□□ -2.13
GTF2H3-210ENST00000543005 KDM6BO15054 1643 aa1.77□□□□□ -2.13
GTF2H3-210ENST00000543005 ARHGEF12Q9NZN5 1544 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms