RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 FAM231DQ6ZW35 169 aa9.8□□□□□ -0.84
DDX11-221ENST00000542661 ZNRF2Q8NHG8 242 aa9.8□□□□□ -0.84
DDX11-221ENST00000542661 TPPP3Q9BW30 176 aa9.8□□□□□ -0.84
DDX11-221ENST00000542661 SAMD10Q9BYL1 202 aa9.8□□□□□ -0.84
DDX11-221ENST00000542661 A0A087WWL8 130 aa9.79□□□□□ -0.84
DDX11-221ENST00000542661 CRYGDP07320 174 aa9.79□□□□□ -0.84
DDX11-221ENST00000542661 TMEM241Q24JQ0 296 aa9.79□□□□□ -0.84
DDX11-221ENST00000542661 LYPD5Q6UWN5 251 aa9.79□□□□□ -0.84
DDX11-221ENST00000542661 LINC01551Q86U37 167 aa9.79□□□□□ -0.84
DDX11-221ENST00000542661 IGLV2-18A0A075B6J9 118 aa9.78□□□□□ -0.84
DDX11-221ENST00000542661 GATCO43716 136 aaKnown RBP9.78□□□□□ -0.84
DDX11-221ENST00000542661 SMIM17P0DL12 118 aa9.78□□□□□ -0.84
DDX11-221ENST00000542661 ERVFC1-1P60608 527 aa9.78□□□□□ -0.84
DDX11-221ENST00000542661 CT83Q5H943 113 aa9.78□□□□□ -0.84
DDX11-221ENST00000542661 WDR73Q6P4I2 378 aa9.78□□□□□ -0.84
DDX11-221ENST00000542661 Q6ZSN1 163 aa9.78□□□□□ -0.84
DDX11-221ENST00000542661 AP1S3Q96PC3 154 aa9.78□□□□□ -0.84
DDX11-221ENST00000542661 Q9H8V8 135 aa9.78□□□□□ -0.84
DDX11-221ENST00000542661 DNAH10Q8IVF4 4471 aa9.78□□□□□ -0.84
DDX11-221ENST00000542661 MUC21A0A0G2JKD1 596 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 LOC100131303A0A0U1RQF7 123 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 MUC21A0A140T8X8 626 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 A8MWL6 223 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 C9JQL5 133 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 TIRAPP58753 221 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 RAB4BP61018 213 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
DDX11-221ENST00000542661 SOHLH1Q5JUK2 328 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 CLLU1Q5K131 121 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 LYZL1Q6UWQ5 148 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 NAT8Q9UHE5 227 aa9.77□□□□□ -0.85
DDX11-221ENST00000542661 TRBV10-1A0A0K0K1A3 114 aa9.76□□□□□ -0.85
DDX11-221ENST00000542661 M0R2N4 97 aa9.76□□□□□ -0.85
DDX11-221ENST00000542661 CTRLP40313 264 aa9.76□□□□□ -0.85
DDX11-221ENST00000542661 SSTP61278 116 aa9.76□□□□□ -0.85
DDX11-221ENST00000542661 TTC32Q5I0X7 151 aa9.76□□□□□ -0.85
DDX11-221ENST00000542661 Q6ZR54 194 aa9.76□□□□□ -0.85
DDX11-221ENST00000542661 C15orf54Q8N8G6 183 aa9.76□□□□□ -0.85
DDX11-221ENST00000542661 OSTCQ9NRP0 149 aa9.76□□□□□ -0.85
DDX11-221ENST00000542661 DNAH2Q9P225 4427 aa9.76□□□□□ -0.85
DDX11-221ENST00000542661 NBDYA0A0U1RRE5 68 aa9.75□□□□□ -0.85
DDX11-221ENST00000542661 C14orf178Q8N769 122 aaPredicted RBP9.75□□□□□ -0.85
DDX11-221ENST00000542661 CNFNQ9BYD5 112 aa9.75□□□□□ -0.85
DDX11-221ENST00000542661 SIVA1O15304 175 aa9.74□□□□□ -0.85
DDX11-221ENST00000542661 TRGC1P0CF51 173 aa9.74□□□□□ -0.85
DDX11-221ENST00000542661 ZNF56Q15929 161 aa9.74□□□□□ -0.85
DDX11-221ENST00000542661 ATP6V0E2Q8NHE4 81 aa9.74□□□□□ -0.85
DDX11-221ENST00000542661 FRAS1Q86XX4 4008 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 FAM231BA6NCW3 169 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 GAGE12JA6NER3 117 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 F5H697 171 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 NTF3P20783 257 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 RPL23P62829 140 aaKnown RBP9.73□□□□□ -0.85
DDX11-221ENST00000542661 IFITM2Q01629 132 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 GAGE1Q13065 139 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 GAGE4Q13068 117 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 GAGE5Q13069 117 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 ADIRFQ15847 76 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 GAGE13Q4V321 117 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 GTSF1Q8WW33 167 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 ISOC2Q96AB3 205 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 GTSF1LQ9H1H1 148 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 KIF25-AS1Q9Y6Z4 181 aa9.73□□□□□ -0.85
DDX11-221ENST00000542661 BIRC6Q9NR09 4857 aa9.72□□□□□ -0.85
DDX11-221ENST00000542661 LINC00694P0DN24 101 aa9.72□□□□□ -0.85
DDX11-221ENST00000542661 FOXA3P55318 350 aaPredicted RBP9.72□□□□□ -0.85
DDX11-221ENST00000542661 RPL36AP83881 106 aaKnown RBP9.72□□□□□ -0.85
DDX11-221ENST00000542661 TWIST1Q15672 202 aa9.72□□□□□ -0.85
DDX11-221ENST00000542661 TSKUQ8WUA8 353 aa9.72□□□□□ -0.85
DDX11-221ENST00000542661 RPL36ALQ969Q0 106 aaKnown RBP9.72□□□□□ -0.85
DDX11-221ENST00000542661 BORCS7Q96B45 105 aa9.72□□□□□ -0.85
DDX11-221ENST00000542661 MSRB1Q9NZV6 116 aa9.72□□□□□ -0.85
DDX11-221ENST00000542661 TRBV7-3A0A075B6L6 115 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 TRAV9-2A0A087WT02 112 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 A0A087WWC5 75 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 TRAV8-6A0A0B4J262 113 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 H7C1H1 209 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 K7EP13 123 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 BTF3P20290 206 aaKnown RBP9.71□□□□□ -0.86
DDX11-221ENST00000542661 C1orf134Q5TEV5 83 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 LINC00336Q6ZUF6 198 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 SMIM15Q7Z3B0 74 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 OR10G8Q8NGN5 311 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 DPH3P1Q9H4G8 78 aa9.71□□□□□ -0.86
DDX11-221ENST00000542661 EPPK1P58107 5090 aaKnown RBP9.71□□□□□ -0.86
DDX11-221ENST00000542661 EVI2AP22794 236 aa9.7□□□□□ -0.86
DDX11-221ENST00000542661 LINC00315P59091 139 aa9.7□□□□□ -0.86
DDX11-221ENST00000542661 LELP1Q5T871 98 aa9.7□□□□□ -0.86
DDX11-221ENST00000542661 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.7□□□□□ -0.86
DDX11-221ENST00000542661 PGLYRP4Q96LB8 373 aa9.7□□□□□ -0.86
DDX11-221ENST00000542661 Q9UF83 564 aa9.7□□□□□ -0.86
DDX11-221ENST00000542661 V9GYV3 84 aa9.7□□□□□ -0.86
DDX11-221ENST00000542661 DNAH17Q9UFH2 4485 aa9.7□□□□□ -0.86
DDX11-221ENST00000542661 HIGD1CA8MV81 97 aa9.69□□□□□ -0.86
DDX11-221ENST00000542661 MGPP08493 103 aa9.69□□□□□ -0.86
DDX11-221ENST00000542661 OR10J3Q5JRS4 329 aa9.69□□□□□ -0.86
DDX11-221ENST00000542661 A0A1B0GUT8 65 aa9.68□□□□□ -0.86
DDX11-221ENST00000542661 DNAH10OSP0CZ25 163 aa9.68□□□□□ -0.86
DDX11-221ENST00000542661 UBE2D3P61077 147 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms