RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 IGHV3-30-3P0DP02 117 aa11.04□□□□□ -0.64
CCND1-205ENST00000542367 IGHV3-30-5P0DP03 117 aa11.04□□□□□ -0.64
CCND1-205ENST00000542367 FAM74A4Q5TZK3 123 aa11.04□□□□□ -0.64
CCND1-205ENST00000542367 BAGE2Q86Y30 109 aa11.04□□□□□ -0.64
CCND1-205ENST00000542367 SFRP2Q96HF1 295 aa11.04□□□□□ -0.64
CCND1-205ENST00000542367 M0R381 172 aa11.03□□□□□ -0.64
CCND1-205ENST00000542367 RHODO00212 210 aa11.03□□□□□ -0.64
CCND1-205ENST00000542367 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
CCND1-205ENST00000542367 A0A087WWL8 130 aa11.02□□□□□ -0.65
CCND1-205ENST00000542367 CCL20P78556 96 aa11.02□□□□□ -0.65
CCND1-205ENST00000542367 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.65
CCND1-205ENST00000542367 MLST8Q9BVC4 326 aa11.02□□□□□ -0.65
CCND1-205ENST00000542367 Q9HAA7 133 aa11.02□□□□□ -0.65
CCND1-205ENST00000542367 PSCAO43653 123 aa11.01□□□□□ -0.65
CCND1-205ENST00000542367 CDPF1Q6NVV7 123 aa11.01□□□□□ -0.65
CCND1-205ENST00000542367 ZFP82Q8N141 532 aa11.01□□□□□ -0.65
CCND1-205ENST00000542367 Q8N3U1 123 aa11□□□□□ -0.65
CCND1-205ENST00000542367 MANBALQ9NQG1 85 aa11□□□□□ -0.65
CCND1-205ENST00000542367 GNG13Q9P2W3 67 aa11□□□□□ -0.65
CCND1-205ENST00000542367 TRAV1-1A0A0B4J248 108 aa10.99□□□□□ -0.65
CCND1-205ENST00000542367 RAB5CP51148 216 aa10.99□□□□□ -0.65
CCND1-205ENST00000542367 EIF5AL1Q6IS14 154 aaKnown RBP10.99□□□□□ -0.65
CCND1-205ENST00000542367 PRR27Q6MZM9 219 aa10.99□□□□□ -0.65
CCND1-205ENST00000542367 Q8N1X5 172 aa10.99□□□□□ -0.65
CCND1-205ENST00000542367 A0A087WWC5 75 aa10.98□□□□□ -0.65
CCND1-205ENST00000542367 LRCOL1A6NCL2 159 aa10.98□□□□□ -0.65
CCND1-205ENST00000542367 CXCL1P09341 107 aa10.98□□□□□ -0.65
CCND1-205ENST00000542367 RPL35P42766 123 aaKnown RBP10.98□□□□□ -0.65
CCND1-205ENST00000542367 TCTE3Q8IZS6 198 aa10.98□□□□□ -0.65
CCND1-205ENST00000542367 OR10AG1Q8NH19 301 aa10.98□□□□□ -0.65
CCND1-205ENST00000542367 TEX46H3BTG2 121 aa10.97□□□□□ -0.65
CCND1-205ENST00000542367 SULT1A2P50226 295 aa10.97□□□□□ -0.65
CCND1-205ENST00000542367 DERL1Q9BUN8 251 aa10.97□□□□□ -0.65
CCND1-205ENST00000542367 MUC21A0A0G2JKD1 596 aa10.96□□□□□ -0.65
CCND1-205ENST00000542367 TRBV10-1A0A0K0K1A3 114 aa10.96□□□□□ -0.65
CCND1-205ENST00000542367 MUC21A0A140T8X8 626 aa10.96□□□□□ -0.65
CCND1-205ENST00000542367 KRTAP10-1P60331 282 aa10.96□□□□□ -0.65
CCND1-205ENST00000542367 LAGE3Q14657 143 aa10.96□□□□□ -0.65
CCND1-205ENST00000542367 DAZ4Q86SG3 579 aaKnown RBP10.96□□□□□ -0.65
CCND1-205ENST00000542367 C11orf52Q96A22 123 aa10.96□□□□□ -0.65
CCND1-205ENST00000542367 SSBP4Q9BWG4 385 aaPredicted RBP10.96□□□□□ -0.65
CCND1-205ENST00000542367 DAZ3Q9NR90 486 aaKnown RBP10.96□□□□□ -0.65
CCND1-205ENST00000542367 ABCA13Q86UQ4 5058 aa10.96□□□□□ -0.66
CCND1-205ENST00000542367 SNAI2O43623 268 aa10.95□□□□□ -0.66
CCND1-205ENST00000542367 RPL36AP83881 106 aaKnown RBP10.95□□□□□ -0.66
CCND1-205ENST00000542367 SPANXN1Q5VSR9 72 aa10.95□□□□□ -0.66
CCND1-205ENST00000542367 RPL36ALQ969Q0 106 aaKnown RBP10.95□□□□□ -0.66
CCND1-205ENST00000542367 C1QBP02746 253 aa10.94□□□□□ -0.66
CCND1-205ENST00000542367 OR5AL1P0C617 328 aa10.94□□□□□ -0.66
CCND1-205ENST00000542367 GCSHP23434 173 aa10.94□□□□□ -0.66
CCND1-205ENST00000542367 XGP55808 180 aa10.94□□□□□ -0.66
CCND1-205ENST00000542367 RAB4BP61018 213 aa10.94□□□□□ -0.66
CCND1-205ENST00000542367 SSTP61278 116 aa10.94□□□□□ -0.66
CCND1-205ENST00000542367 CENPWQ5EE01 88 aa10.94□□□□□ -0.66
CCND1-205ENST00000542367 SLC51BQ86UW2 128 aa10.94□□□□□ -0.66
CCND1-205ENST00000542367 TM2D2Q9BX73 214 aa10.94□□□□□ -0.66
CCND1-205ENST00000542367 TRBV7-3A0A075B6L6 115 aa10.93□□□□□ -0.66
CCND1-205ENST00000542367 IGLV5-52A0A0A0MRZ9 124 aa10.93□□□□□ -0.66
CCND1-205ENST00000542367 TRAV8-3A0A0A6YYJ7 113 aa10.93□□□□□ -0.66
CCND1-205ENST00000542367 RAB19A4D1S5 217 aa10.93□□□□□ -0.66
CCND1-205ENST00000542367 UBE2D3P61077 147 aa10.93□□□□□ -0.66
CCND1-205ENST00000542367 UBE2D2P62837 147 aa10.93□□□□□ -0.66
CCND1-205ENST00000542367 ZNF56Q15929 161 aa10.93□□□□□ -0.66
CCND1-205ENST00000542367 Q6ZNX1 250 aa10.93□□□□□ -0.66
CCND1-205ENST00000542367 NIT1Q86X76 327 aa10.93□□□□□ -0.66
CCND1-205ENST00000542367 URGCP-MRPS24S4R325 110 aa10.93□□□□□ -0.66
CCND1-205ENST00000542367 IGLV2-8P01709 118 aa10.92□□□□□ -0.66
CCND1-205ENST00000542367 MEF2BQ02080 365 aaPredicted RBP10.92□□□□□ -0.66
CCND1-205ENST00000542367 TOR2AQ5JU69 321 aa10.92□□□□□ -0.66
CCND1-205ENST00000542367 Q8N814 137 aa10.92□□□□□ -0.66
CCND1-205ENST00000542367 IFNA1P01562 189 aa10.91□□□□□ -0.66
CCND1-205ENST00000542367 NEXN-AS1Q8NBZ9 246 aa10.91□□□□□ -0.66
CCND1-205ENST00000542367 OR10G8Q8NGN5 311 aa10.91□□□□□ -0.66
CCND1-205ENST00000542367 NTN5Q8WTR8 489 aaPredicted RBP10.91□□□□□ -0.66
CCND1-205ENST00000542367 DAZAP1Q96EP5 407 aaKnown RBP10.91□□□□□ -0.66
CCND1-205ENST00000542367 MED9Q9NWA0 146 aa10.91□□□□□ -0.66
CCND1-205ENST00000542367 F5H697 171 aa10.9□□□□□ -0.66
CCND1-205ENST00000542367 PDE6DO43924 150 aa10.9□□□□□ -0.66
CCND1-205ENST00000542367 GZMBP10144 247 aa10.9□□□□□ -0.66
CCND1-205ENST00000542367 GNG4P50150 75 aa10.9□□□□□ -0.66
CCND1-205ENST00000542367 OR2D3Q8NGH3 330 aa10.9□□□□□ -0.66
CCND1-205ENST00000542367 FAT1Q14517 4588 aa10.9□□□□□ -0.67
CCND1-205ENST00000542367 A0A087WX48 190 aa10.89□□□□□ -0.67
CCND1-205ENST00000542367 RBFOX3A6NFN3 312 aa10.89□□□□□ -0.67
CCND1-205ENST00000542367 SMIM17P0DL12 118 aa10.89□□□□□ -0.67
CCND1-205ENST00000542367 BCL2P10415 239 aa10.89□□□□□ -0.67
CCND1-205ENST00000542367 WFDC2Q14508 124 aa10.89□□□□□ -0.67
CCND1-205ENST00000542367 SMIM12Q96EX1 92 aa10.89□□□□□ -0.67
CCND1-205ENST00000542367 DNAJC30Q96LL9 226 aa10.89□□□□□ -0.67
CCND1-205ENST00000542367 VAX2Q9UIW0 290 aa10.89□□□□□ -0.67
CCND1-205ENST00000542367 KLK12Q9UKR0 248 aa10.89□□□□□ -0.67
CCND1-205ENST00000542367 TRBV6-8A0A0A6YYG3 113 aa10.88□□□□□ -0.67
CCND1-205ENST00000542367 C19orf71A6NCJ1 209 aa10.88□□□□□ -0.67
CCND1-205ENST00000542367 IGLC6P0CF74 106 aa10.88□□□□□ -0.67
CCND1-205ENST00000542367 RPS20P60866 119 aaKnown RBP10.88□□□□□ -0.67
CCND1-205ENST00000542367 KCNIP4Q6PIL6 250 aa10.88□□□□□ -0.67
CCND1-205ENST00000542367 FER1L6-AS1Q8NA97 138 aa10.88□□□□□ -0.67
CCND1-205ENST00000542367 CHCHD7Q9BUK0 85 aa10.88□□□□□ -0.67
CCND1-205ENST00000542367 TPPP3Q9BW30 176 aa10.88□□□□□ -0.67
CCND1-205ENST00000542367 KIF25-AS1Q9Y6Z4 181 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms