RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 A0A0B4J2C4 111 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 IGHV3-66A0A0C4DH42 116 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 IBA57-AS1B1ANH7 110 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 INS-IGF2F8WCM5 200 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 PANO1I0J062 215 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 K7ERJ3 54 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 IGLV3-27P01718 113 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 MGST1P10620 155 aaKnown RBP2.12□□□□□ -2.07
USP28-210ENST00000542033 NPPCP23582 126 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 MYCNOSP40205 109 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 SPINT3P49223 89 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 SLC48A1Q6P1K1 146 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 VN1R4Q7Z5H5 301 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 LYPD6Q86Y78 171 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 TMEM75Q8N9X5 138 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 OR8A1Q8NGG7 326 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 TOMM6Q96B49 74 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 ARHGAP5-AS1Q96IT6 56 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 TMEM243Q9BU79 118 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 C11orf68Q9H3H3 251 aaKnown RBP2.12□□□□□ -2.07
USP28-210ENST00000542033 PSENENQ9NZ42 101 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 TP73-AS1Q9UF72 201 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 SCN10AQ9Y5Y9 1956 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 THSD7AQ9UPZ6 1657 aa2.12□□□□□ -2.07
USP28-210ENST00000542033 TRBV20OR9-2A0A075B6H5 130 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 LOC107984156A0A0G2JMH3 177 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 IGHV3-64DA0A0J9YX35 117 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 A0A0J9YXV3 536 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 H3BVH4 76 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 M0R378 163 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 TIMM17BO60830 172 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 CCKP06307 115 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 SLC25A16P16260 332 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 CKS2P33552 79 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 IFI27P40305 119 aaPredicted RBP2.11□□□□□ -2.07
USP28-210ENST00000542033 CACNG7P62955 275 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 ZNF816Q0VGE8 651 aaPredicted RBP2.11□□□□□ -2.07
USP28-210ENST00000542033 KLKP1Q107X0 134 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 FAM222AQ5U5X8 452 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 CEMP1Q6PRD7 247 aaPredicted RBP2.11□□□□□ -2.07
USP28-210ENST00000542033 LCA10Q71F78 164 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 ARL17AQ8IVW1 177 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 Q8N2B8 174 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 DAND5Q8N907 189 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 SLC50A1Q9BRV3 221 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 TRPM6Q9BX84 2022 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 MDC1Q14676 2089 aaKnown RBP2.11□□□□□ -2.07
USP28-210ENST00000542033 DOCK11Q5JSL3 2073 aa2.11□□□□□ -2.07
USP28-210ENST00000542033 PTPRBP23467 1997 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 DOCK8Q8NF50 2099 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 DOCK9Q9BZ29 2069 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 IGLV1-50A0A075B6I6 118 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 TRAV41A0A0B4J266 112 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 IGHV1-69DA0A0B4J2H0 117 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 A6NDX4 124 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 LINC01549A6NIU2 74 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 H7BZZ5 65 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 ZNF73O43830 326 aaPredicted RBP2.1□□□□□ -2.07
USP28-210ENST00000542033 FXYD4P59646 89 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 UBE2BP63146 152 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 KISS1Q15726 138 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 Q1T7F1 81 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 ATP5EP2Q5VTU8 51 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 Q6JHZ5 121 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 CLEC19AQ6UXS0 136 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 UNQ9165/PRO28630Q6UXU0 137 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 Q8N8P6 123 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 SLC25A29Q8N8R3 303 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 Q8N9W7 124 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 DCANP1Q8TF63 244 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 CCL17Q92583 94 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 RPP21Q9H633 154 aaKnown RBP2.1□□□□□ -2.07
USP28-210ENST00000542033 TMEM167BQ9NRX6 74 aa2.1□□□□□ -2.07
USP28-210ENST00000542033 GTF3C1Q12789 2109 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 TRAV8-3A0A0A6YYJ7 113 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 TRBV7-1A0A0A6YYK4 115 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 TRAV13-2A0A0B4J235 113 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 IGHV5-51A0A0C4DH38 117 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 TRBV30A0A0K0K1B3 111 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 TRBV10-3A0A0K0K1G6 114 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 TEX49A0A1B0GTD5 131 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 A0A1W2PQD3 144 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 LINC01546A6NGU7 62 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 H3BP45 60 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 LTAP01374 205 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 IGKV1D-33P01593 117 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 IGKV1-33P01594 117 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 COX6CP09669 75 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 INAFM2P0DMQ5 153 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 RNASE2P10153 161 aaKnown RBP2.09□□□□□ -2.07
USP28-210ENST00000542033 PLNP26678 52 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 XCL1P47992 114 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 RBMY1FQ15415 496 aaKnown RBP2.09□□□□□ -2.07
USP28-210ENST00000542033 SPANXN5Q5MJ07 72 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 S100A7L2Q5SY68 101 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 C2orf82Q6UX34 121 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 MDP1Q86V88 176 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 Q8N9L7 120 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 DYNLRB2Q8TF09 96 aa2.09□□□□□ -2.07
USP28-210ENST00000542033 SPTSSAQ969W0 71 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms