RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 TRAV8-1A0A0A6YYK1 113 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 TRBV7-1A0A0A6YYK4 115 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 M0R2Z0 102 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 CMC4P56277 68 aaPredicted RBP6.85□□□□□ -1.31
CHFR-220ENST00000541817 RPS20P60866 119 aaKnown RBP6.85□□□□□ -1.31
CHFR-220ENST00000541817 ANKRD39Q53RE8 183 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 C16orf54Q6UWD8 224 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 ZNF705AQ6ZN79 300 aaPredicted RBP6.85□□□□□ -1.31
CHFR-220ENST00000541817 ZNF502Q8TBZ5 544 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 C20orf144Q9BQM9 153 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 C2orf88Q9BSF0 95 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 SSBP4Q9BWG4 385 aaPredicted RBP6.85□□□□□ -1.31
CHFR-220ENST00000541817 KRTAP1-5Q9BYS1 174 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 SMPXQ9UHP9 88 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 CBY1Q9Y3M2 126 aa6.85□□□□□ -1.31
CHFR-220ENST00000541817 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 A0A1B0GUT8 65 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 TMEM189A5PLL7 270 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 M0R143 59 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 CTSGP08311 255 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 FOXA3P55318 350 aaPredicted RBP6.84□□□□□ -1.31
CHFR-220ENST00000541817 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 KLK9Q2XQG4 91 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 DMRTA1Q5VZB9 504 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 MORN3Q6PF18 240 aaPredicted RBP6.84□□□□□ -1.31
CHFR-220ENST00000541817 TRPT1Q86TN4 253 aaKnown RBP6.84□□□□□ -1.31
CHFR-220ENST00000541817 MRPL52Q86TS9 123 aaKnown RBP6.84□□□□□ -1.31
CHFR-220ENST00000541817 NIT1Q86X76 327 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 FAM19A2Q8N3H0 131 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 C15orf53Q8NAA6 179 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 CSNK1G2-AS1Q8NCQ2 148 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 GTSF1Q8WW33 167 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 CHCHD1Q96BP2 118 aaKnown RBP6.84□□□□□ -1.31
CHFR-220ENST00000541817 ZC2HC1AQ96GY0 325 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 MIEN1Q9BRT3 115 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 NDFIP1Q9BT67 221 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 RHPN1-AS1Q9BWJ2 59 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 KLK9Q9UKQ9 250 aa6.84□□□□□ -1.31
CHFR-220ENST00000541817 C3orf79P0CE67 100 aa6.83□□□□□ -1.32
CHFR-220ENST00000541817 SPART-AS1P0CW21 52 aa6.83□□□□□ -1.32
CHFR-220ENST00000541817 PAM16Q9Y3D7 125 aa6.83□□□□□ -1.32
CHFR-220ENST00000541817 IGHV3-66A0A0C4DH42 116 aa6.82□□□□□ -1.32
CHFR-220ENST00000541817 IGHV7-4-1A0A0J9YVY3 117 aa6.82□□□□□ -1.32
CHFR-220ENST00000541817 M0R3E3 92 aa6.82□□□□□ -1.32
CHFR-220ENST00000541817 OR5AL1P0C617 328 aa6.82□□□□□ -1.32
CHFR-220ENST00000541817 GATD1Q8NB37 220 aa6.82□□□□□ -1.32
CHFR-220ENST00000541817 C8orf49Q96NF6 230 aa6.82□□□□□ -1.32
CHFR-220ENST00000541817 ATP6V0BQ99437 205 aa6.82□□□□□ -1.32
CHFR-220ENST00000541817 SLC50A1Q9BRV3 221 aa6.82□□□□□ -1.32
CHFR-220ENST00000541817 A0A087X0K7 114 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 A0A1B0GV90 55 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 C20orf202A1L168 122 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 NDUFA4O00483 81 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 SH2D1AO60880 128 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 NUDT3O95989 172 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 LINC00614P0C842 121 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 SPATA45Q537H7 98 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 FAM222AQ5U5X8 452 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 Q8N976 141 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 METTL26Q96S19 204 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 MS4A6AQ9H2W1 248 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 XCL2Q9UBD3 114 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 LINC00588Q9Y4M8 146 aa6.81□□□□□ -1.32
CHFR-220ENST00000541817 LRP1Q07954 4544 aaKnown RBP6.81□□□□□ -1.32
CHFR-220ENST00000541817 IGKV2-40A0A087WW87 121 aaPredicted RBP6.8□□□□□ -1.32
CHFR-220ENST00000541817 RBAKDNA6NC62 111 aa6.8□□□□□ -1.32
CHFR-220ENST00000541817 K7EMT4 169 aa6.8□□□□□ -1.32
CHFR-220ENST00000541817 IGKV2D-40P01614 121 aaPredicted RBP6.8□□□□□ -1.32
CHFR-220ENST00000541817 APOHP02749 345 aaPredicted RBP6.8□□□□□ -1.32
CHFR-220ENST00000541817 ARMS2P0C7Q2 107 aa6.8□□□□□ -1.32
CHFR-220ENST00000541817 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
CHFR-220ENST00000541817 COX8CQ7Z4L0 72 aa6.8□□□□□ -1.32
CHFR-220ENST00000541817 TMEM70Q9BUB7 260 aa6.8□□□□□ -1.32
CHFR-220ENST00000541817 TPPP3Q9BW30 176 aa6.8□□□□□ -1.32
CHFR-220ENST00000541817 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
CHFR-220ENST00000541817 PGPEP1Q9NXJ5 209 aa6.8□□□□□ -1.32
CHFR-220ENST00000541817 UQCR10Q9UDW1 63 aa6.8□□□□□ -1.32
CHFR-220ENST00000541817 IGHV3OR16-12A0A075B7B8 117 aa6.79□□□□□ -1.32
CHFR-220ENST00000541817 FABP5P3A8MUU1 101 aa6.79□□□□□ -1.32
CHFR-220ENST00000541817 LEPROTL1O95214 131 aa6.79□□□□□ -1.32
CHFR-220ENST00000541817 CRIP1P50238 77 aa6.79□□□□□ -1.32
CHFR-220ENST00000541817 TDRG1Q3Y452 100 aa6.79□□□□□ -1.32
CHFR-220ENST00000541817 LYZL1Q6UWQ5 148 aa6.79□□□□□ -1.32
CHFR-220ENST00000541817 ZNF493Q6ZR52 646 aa6.79□□□□□ -1.32
CHFR-220ENST00000541817 FA2HQ7L5A8 372 aa6.79□□□□□ -1.32
CHFR-220ENST00000541817 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
CHFR-220ENST00000541817 DKK2Q9UBU2 259 aa6.79□□□□□ -1.32
CHFR-220ENST00000541817 TRAV9-2A0A087WT02 112 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 TMSB15BA0A087X1C1 80 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 EREGO14944 169 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 BUB3O43684 328 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 ZNF688P0C7X2 276 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 EBLN2Q6P2I7 272 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 FER1L6-AS1Q8NA97 138 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 PRSS3P2Q8NHM4 247 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 MRPL53Q96EL3 112 aaKnown RBP6.78□□□□□ -1.32
CHFR-220ENST00000541817 VGLL1Q99990 258 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 SNHG12Q9BXW3 62 aa6.78□□□□□ -1.32
CHFR-220ENST00000541817 MAP1LC3CQ9BXW4 147 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms