RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 H2BFSP57053 126 aa7.94□□□□□ -1.14
SNHG1-216ENST00000541416 Q6ZRU5 148 aa7.94□□□□□ -1.14
SNHG1-216ENST00000541416 SUN5Q8TC36 379 aa7.94□□□□□ -1.14
SNHG1-216ENST00000541416 RAB24Q969Q5 203 aa7.94□□□□□ -1.14
SNHG1-216ENST00000541416 JPT2Q9H910 190 aa7.94□□□□□ -1.14
SNHG1-216ENST00000541416 NDUFA13Q9P0J0 144 aa7.94□□□□□ -1.14
SNHG1-216ENST00000541416 Q9UF83 564 aa7.94□□□□□ -1.14
SNHG1-216ENST00000541416 PHLDA3Q9Y5J5 127 aa7.94□□□□□ -1.14
SNHG1-216ENST00000541416 TRBV7-3A0A075B6L6 115 aa7.93□□□□□ -1.14
SNHG1-216ENST00000541416 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
SNHG1-216ENST00000541416 INMT-MINDY4F8WBC2 141 aa7.93□□□□□ -1.14
SNHG1-216ENST00000541416 HLA-DQA1P01909 254 aa7.93□□□□□ -1.14
SNHG1-216ENST00000541416 ARMS2P0C7Q2 107 aa7.93□□□□□ -1.14
SNHG1-216ENST00000541416 MIAQ16674 131 aa7.93□□□□□ -1.14
SNHG1-216ENST00000541416 LINC00299Q6ZSB3 139 aa7.93□□□□□ -1.14
SNHG1-216ENST00000541416 S100ZQ8WXG8 99 aa7.93□□□□□ -1.14
SNHG1-216ENST00000541416 DAZAP1Q96EP5 407 aaKnown RBP7.93□□□□□ -1.14
SNHG1-216ENST00000541416 ARL2-SNX15V9GYD0 113 aa7.93□□□□□ -1.14
SNHG1-216ENST00000541416 A0A1W2PRE2 83 aa7.92□□□□□ -1.14
SNHG1-216ENST00000541416 IFNA7P01567 189 aa7.92□□□□□ -1.14
SNHG1-216ENST00000541416 ANGP03950 147 aaKnown RBP7.92□□□□□ -1.14
SNHG1-216ENST00000541416 TPT1P13693 172 aaKnown RBP7.92□□□□□ -1.14
SNHG1-216ENST00000541416 RPL19P84098 196 aaKnown RBP7.92□□□□□ -1.14
SNHG1-216ENST00000541416 SERF2P84101 59 aa7.92□□□□□ -1.14
SNHG1-216ENST00000541416 DNLZQ5SXM8 178 aa7.92□□□□□ -1.14
SNHG1-216ENST00000541416 ZFP82Q8N141 532 aa7.92□□□□□ -1.14
SNHG1-216ENST00000541416 C15orf54Q8N8G6 183 aa7.92□□□□□ -1.14
SNHG1-216ENST00000541416 C9orf163Q8N9P6 203 aa7.92□□□□□ -1.14
SNHG1-216ENST00000541416 SFRP2Q96HF1 295 aa7.92□□□□□ -1.14
SNHG1-216ENST00000541416 ACTR3CQ9C0K3 210 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-216ENST00000541416 DPH3P1Q9H4G8 78 aa7.92□□□□□ -1.14
SNHG1-216ENST00000541416 A0A087WWL8 130 aa7.91□□□□□ -1.14
SNHG1-216ENST00000541416 TRBV6-8A0A0A6YYG3 113 aa7.91□□□□□ -1.14
SNHG1-216ENST00000541416 M0R381 172 aa7.91□□□□□ -1.14
SNHG1-216ENST00000541416 UBE2D3P61077 147 aa7.91□□□□□ -1.14
SNHG1-216ENST00000541416 UBE2D2P62837 147 aa7.91□□□□□ -1.14
SNHG1-216ENST00000541416 ENHOQ6UWT2 76 aa7.91□□□□□ -1.14
SNHG1-216ENST00000541416 PSMG3Q9BT73 122 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-216ENST00000541416 NKX6-2Q9C056 277 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-216ENST00000541416 WFDC1Q9HC57 220 aa7.91□□□□□ -1.14
SNHG1-216ENST00000541416 RNF213Q63HN8 5207 aa7.9□□□□□ -1.14
SNHG1-216ENST00000541416 KRBOX1C9JBD0 128 aa7.9□□□□□ -1.14
SNHG1-216ENST00000541416 M0R036 132 aa7.9□□□□□ -1.14
SNHG1-216ENST00000541416 HNRNPA3P51991 378 aaKnown RBP7.9□□□□□ -1.14
SNHG1-216ENST00000541416 TMEM97Q5BJF2 176 aa7.9□□□□□ -1.14
SNHG1-216ENST00000541416 CLRN3Q8NCR9 226 aa7.9□□□□□ -1.14
SNHG1-216ENST00000541416 CHCHD5Q9BSY4 110 aa7.9□□□□□ -1.14
SNHG1-216ENST00000541416 TRAV34A0A0B4J273 112 aa7.89□□□□□ -1.15
SNHG1-216ENST00000541416 PRSS1P07477 247 aa7.89□□□□□ -1.15
SNHG1-216ENST00000541416 MPV17L2Q567V2 206 aa7.89□□□□□ -1.15
SNHG1-216ENST00000541416 FAM162BQ5T6X4 162 aa7.89□□□□□ -1.15
SNHG1-216ENST00000541416 Q86TA4 180 aa7.89□□□□□ -1.15
SNHG1-216ENST00000541416 OR10G8Q8NGN5 311 aa7.89□□□□□ -1.15
SNHG1-216ENST00000541416 HIST1H2BAQ96A08 127 aa7.89□□□□□ -1.15
SNHG1-216ENST00000541416 DPH3Q96FX2 82 aa7.89□□□□□ -1.15
SNHG1-216ENST00000541416 ZFP30Q9Y2G7 519 aa7.89□□□□□ -1.15
SNHG1-216ENST00000541416 GRIFINA4D1Z8 144 aa7.88□□□□□ -1.15
SNHG1-216ENST00000541416 PEX7O00628 323 aa7.88□□□□□ -1.15
SNHG1-216ENST00000541416 PTTG1O95997 202 aa7.88□□□□□ -1.15
SNHG1-216ENST00000541416 RAB4BP61018 213 aa7.88□□□□□ -1.15
SNHG1-216ENST00000541416 MARVELD1Q9BSK0 173 aa7.88□□□□□ -1.15
SNHG1-216ENST00000541416 TNFSF18Q9UNG2 199 aa7.88□□□□□ -1.15
SNHG1-216ENST00000541416 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-216ENST00000541416 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-216ENST00000541416 A6NHS1 94 aa7.87□□□□□ -1.15
SNHG1-216ENST00000541416 SH2D1AO60880 128 aa7.87□□□□□ -1.15
SNHG1-216ENST00000541416 UPK1BO75841 260 aa7.87□□□□□ -1.15
SNHG1-216ENST00000541416 MT1HL1P0DM35 61 aa7.87□□□□□ -1.15
SNHG1-216ENST00000541416 ATP6V0CP27449 155 aa7.87□□□□□ -1.15
SNHG1-216ENST00000541416 UBE2G1P62253 170 aa7.87□□□□□ -1.15
SNHG1-216ENST00000541416 ZNF56Q15929 161 aa7.87□□□□□ -1.15
SNHG1-216ENST00000541416 RNF185Q96GF1 192 aa7.87□□□□□ -1.15
SNHG1-216ENST00000541416 AP5S1Q9NUS5 200 aa7.87□□□□□ -1.15
SNHG1-216ENST00000541416 LRP2P98164 4655 aa7.87□□□□□ -1.15
SNHG1-216ENST00000541416 LINC01559Q495D7 138 aa7.86□□□□□ -1.15
SNHG1-216ENST00000541416 SDIM1Q6ZPB5 146 aa7.86□□□□□ -1.15
SNHG1-216ENST00000541416 COX8CQ7Z4L0 72 aa7.86□□□□□ -1.15
SNHG1-216ENST00000541416 FMC1Q96HJ9 113 aa7.86□□□□□ -1.15
SNHG1-216ENST00000541416 TNXBP22105 4242 aa7.86□□□□□ -1.15
SNHG1-216ENST00000541416 TRBV25-1A0A075B6N4 114 aa7.85□□□□□ -1.15
SNHG1-216ENST00000541416 IGHV3-64A0A075B6Q5 118 aa7.85□□□□□ -1.15
SNHG1-216ENST00000541416 TMSB15BA0A087X1C1 80 aa7.85□□□□□ -1.15
SNHG1-216ENST00000541416 CRIP1P50238 77 aa7.85□□□□□ -1.15
SNHG1-216ENST00000541416 DEFA1P59665 94 aa7.85□□□□□ -1.15
SNHG1-216ENST00000541416 DEFA3P59666 94 aa7.85□□□□□ -1.15
SNHG1-216ENST00000541416 UBE2G2P60604 165 aa7.85□□□□□ -1.15
SNHG1-216ENST00000541416 CNBPP62633 177 aaKnown RBP7.85□□□□□ -1.15
SNHG1-216ENST00000541416 NEXN-AS1Q8NBZ9 246 aa7.85□□□□□ -1.15
SNHG1-216ENST00000541416 C7orf33Q8WU49 177 aa7.85□□□□□ -1.15
SNHG1-216ENST00000541416 PRR34Q9NV39 138 aa7.85□□□□□ -1.15
SNHG1-216ENST00000541416 CTXND1A0A1B0GTU2 59 aa7.84□□□□□ -1.15
SNHG1-216ENST00000541416 F5H697 171 aa7.84□□□□□ -1.15
SNHG1-216ENST00000541416 ZNF674Q2M3X9 581 aa7.84□□□□□ -1.15
SNHG1-216ENST00000541416 LINC00269Q8N2A0 174 aa7.84□□□□□ -1.15
SNHG1-216ENST00000541416 TCEAL7Q9BRU2 100 aa7.84□□□□□ -1.15
SNHG1-216ENST00000541416 ZNF471Q9BX82 626 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-216ENST00000541416 TRAV8-4A0A0B4J246 113 aa7.83□□□□□ -1.16
SNHG1-216ENST00000541416 hDV102S1A0JD36 115 aa7.83□□□□□ -1.16
SNHG1-216ENST00000541416 P01737 135 aa7.83□□□□□ -1.16
SNHG1-216ENST00000541416 SMIM17P0DL12 118 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 318.1 ms