RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SHISA2Q6UWI4 295 aa7.94□□□□□ -1.14
CHFR-219ENST00000541341 TEN1Q86WV5 123 aa7.94□□□□□ -1.14
CHFR-219ENST00000541341 TEX29Q8N6K0 151 aa7.94□□□□□ -1.14
CHFR-219ENST00000541341 NRACQ8N912 160 aa7.94□□□□□ -1.14
CHFR-219ENST00000541341 CFHR4Q92496 578 aa7.94□□□□□ -1.14
CHFR-219ENST00000541341 SIRPDQ9H106 197 aa7.94□□□□□ -1.14
CHFR-219ENST00000541341 ONECUT1Q9UBC0 465 aa7.94□□□□□ -1.14
CHFR-219ENST00000541341 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.93□□□□□ -1.14
CHFR-219ENST00000541341 SMKR1H3BMG3 65 aa7.93□□□□□ -1.14
CHFR-219ENST00000541341 BUB3O43684 328 aa7.93□□□□□ -1.14
CHFR-219ENST00000541341 COX7A1P24310 79 aa7.93□□□□□ -1.14
CHFR-219ENST00000541341 ERCC8Q13216 396 aa7.93□□□□□ -1.14
CHFR-219ENST00000541341 CFAP126Q5VTH2 177 aa7.93□□□□□ -1.14
CHFR-219ENST00000541341 C8orf86Q6ZUL3 223 aa7.93□□□□□ -1.14
CHFR-219ENST00000541341 NEXN-AS1Q8NBZ9 246 aa7.93□□□□□ -1.14
CHFR-219ENST00000541341 GEMIN7Q9H840 131 aaKnown RBP7.93□□□□□ -1.14
CHFR-219ENST00000541341 PRO0461Q9UI25 63 aa7.93□□□□□ -1.14
CHFR-219ENST00000541341 VWFP04275 2813 aa7.93□□□□□ -1.14
CHFR-219ENST00000541341 MGAM2Q2M2H8 2515 aa7.92□□□□□ -1.14
CHFR-219ENST00000541341 ODF3BA8MYP8 253 aa7.92□□□□□ -1.14
CHFR-219ENST00000541341 APELAP0DMC3 54 aa7.92□□□□□ -1.14
CHFR-219ENST00000541341 SCGB1C2P0DMR2 95 aa7.92□□□□□ -1.14
CHFR-219ENST00000541341 HLA-DMBP28068 263 aa7.92□□□□□ -1.14
CHFR-219ENST00000541341 UBE2D1P51668 147 aa7.92□□□□□ -1.14
CHFR-219ENST00000541341 MRPL23Q16540 153 aaKnown RBP7.92□□□□□ -1.14
CHFR-219ENST00000541341 RUSC1-AS1Q66K80 236 aa7.92□□□□□ -1.14
CHFR-219ENST00000541341 BRD3OSQ6XYD6 125 aa7.92□□□□□ -1.14
CHFR-219ENST00000541341 OR10J6PQ8NGY7 276 aa7.92□□□□□ -1.14
CHFR-219ENST00000541341 NAA38Q9BRA0 125 aaKnown RBP7.92□□□□□ -1.14
CHFR-219ENST00000541341 PGPEP1Q9NXJ5 209 aa7.92□□□□□ -1.14
CHFR-219ENST00000541341 ZNF815PA8K554 130 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 SPINK8P0C7L1 97 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 S100A4P26447 101 aaKnown RBP7.91□□□□□ -1.14
CHFR-219ENST00000541341 ZNF80P51504 273 aaPredicted RBP7.91□□□□□ -1.14
CHFR-219ENST00000541341 UBE2D3P61077 147 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 UBE2D2P62837 147 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 TM4SF20Q53R12 229 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 SBSPONQ8IVN8 264 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 Q8N6K4 173 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 LINC01600Q96MT4 127 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 TIMM17AQ99595 171 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 KIR2DL4Q99706 377 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 SPANXCQ9NY87 97 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 UFC1Q9Y3C8 167 aa7.91□□□□□ -1.14
CHFR-219ENST00000541341 PRKDCP78527 4128 aaKnown RBP7.91□□□□□ -1.14
CHFR-219ENST00000541341 FAM223BA6NKX1 122 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 VCYO14598 125 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 LGALS1P09382 135 aaKnown RBP7.9□□□□□ -1.14
CHFR-219ENST00000541341 ZNF688P0C7X2 276 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 ZFAND6Q6FIF0 208 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 Q6Q795 121 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 VMO1Q7Z5L0 202 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 FAM223AQ8IWN6 122 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 DYNAPQ8N1N2 210 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 POM121L12Q8N7R1 296 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 AGPAT4-IT1Q9H0P7 198 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 PHLDA3Q9Y5J5 127 aa7.9□□□□□ -1.14
CHFR-219ENST00000541341 IGHV4OR15-8A0A075B7B6 117 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 A0A087WW49 117 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 IGKV3D-20A0A0C4DH25 116 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 C11orf86A6NJI1 115 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 K7ERJ3 54 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 BRI3O95415 125 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 RNASE1P07998 156 aaKnown RBP7.89□□□□□ -1.15
CHFR-219ENST00000541341 PMVKQ15126 192 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 DEFB112Q30KQ8 113 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 C2orf66Q6UXQ4 117 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 SYT8Q8NBV8 401 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 PRADC1Q9BSG0 188 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 PRO1854Q9UHT4 67 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 SMAD5-AS1Q9Y6J3 95 aa7.89□□□□□ -1.15
CHFR-219ENST00000541341 LOC107984156A0A0G2JMH3 177 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 IGHV7-4-1A0A0J9YVY3 117 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 F8W735 103 aaPredicted RBP7.88□□□□□ -1.15
CHFR-219ENST00000541341 IGHG4P01861 327 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 P0DMU3 169 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 FAM231AP0DMU4 169 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 FAM231CP0DMU5 169 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 PSMB2P49721 201 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 UBE2E1P51965 193 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 ARL17AQ8IVW1 177 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 C10orf126Q8N4M7 172 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 MAPKAPK5-AS1Q8N8E1 139 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 Q8TAT8 98 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 ZFAND3Q9H8U3 227 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 MSRB1Q9NZV6 116 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 ERG28Q9UKR5 140 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 U3KQE9 123 aa7.88□□□□□ -1.15
CHFR-219ENST00000541341 A0A0J9YX75 114 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 H3BUA1 57 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 COX6CP09669 75 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 LGALS3P17931 250 aaKnown RBP7.87□□□□□ -1.15
CHFR-219ENST00000541341 FXYD7P58549 80 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 KRTAP10-3P60369 221 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 ATP5G2Q06055 141 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 FOXE3Q13461 319 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 C15orf32Q32M92 178 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 HIST2H2BDQ6DRA6 164 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 MORN3Q6PF18 240 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms