RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 UBE2AP49459 152 aa4.69□□□□□ -1.66
LMO3-225ENST00000541295 ZNF80P51504 273 aaPredicted RBP4.69□□□□□ -1.66
LMO3-225ENST00000541295 ZNF525Q8N782 197 aa4.69□□□□□ -1.66
LMO3-225ENST00000541295 XCL2Q9UBD3 114 aa4.69□□□□□ -1.66
LMO3-225ENST00000541295 TRBV7-3A0A075B6L6 115 aa4.68□□□□□ -1.66
LMO3-225ENST00000541295 SCO2A0A1W2PP80 73 aa4.68□□□□□ -1.66
LMO3-225ENST00000541295 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.68□□□□□ -1.66
LMO3-225ENST00000541295 ESPL1Q14674 2120 aa4.68□□□□□ -1.66
LMO3-225ENST00000541295 IGKV1-12A0A0C4DH73 117 aa4.68□□□□□ -1.66
LMO3-225ENST00000541295 IGKV1D-12P01611 117 aa4.68□□□□□ -1.66
LMO3-225ENST00000541295 CRIP3Q6Q6R5 217 aa4.68□□□□□ -1.66
LMO3-225ENST00000541295 URB1-AS1Q96HZ7 61 aa4.68□□□□□ -1.66
LMO3-225ENST00000541295 PRO1854Q9UHT4 67 aa4.68□□□□□ -1.66
LMO3-225ENST00000541295 ATMQ13315 3056 aa4.68□□□□□ -1.66
LMO3-225ENST00000541295 DIDO1Q9BTC0 2240 aaKnown RBP4.68□□□□□ -1.66
LMO3-225ENST00000541295 A0A0G2JNJ9 132 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 PRSS1P07477 247 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 ZNF22P17026 224 aaPredicted RBP4.67□□□□□ -1.66
LMO3-225ENST00000541295 DEFB121Q5J5C9 76 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 GFRALQ6UXV0 394 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 Q9UFV3 132 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 PKDREJQ9NTG1 2253 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 BLCAPP62952 87 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 MORN5Q5VZ52 161 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 C11orf1Q9H5F2 150 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 PLCE1Q9P212 2302 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 UBE2D1P51668 147 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 CXCL6P80162 114 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 RHOHQ15669 191 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 KRTAP27-1Q3LI81 207 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 IGFL3Q6UXB1 125 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 PSENENQ9NZ42 101 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 FAM215AQ9Y5M1 114 aa4.67□□□□□ -1.66
LMO3-225ENST00000541295 TRBV7-1A0A0A6YYK4 115 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 FXYD4P59646 89 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 ZNF818PQ6ZRF7 136 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 DYNLRB2Q8TF09 96 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 C11orf52Q96A22 123 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 HS3ST6Q96QI5 342 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 FGF23Q9GZV9 251 aaPredicted RBP4.66□□□□□ -1.66
LMO3-225ENST00000541295 IGHV4-39P01824 125 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 HOXA4Q00056 320 aaPredicted RBP4.66□□□□□ -1.66
LMO3-225ENST00000541295 MSMPQ1L6U9 139 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 C7orf65Q6ZTY9 151 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 Q8N2B8 174 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 LINC00588Q9Y4M8 146 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 IGKV1D-8A0A087WSZ0 117 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 TRAV3A0A0B4J244 114 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 SOSTDC1Q6X4U4 206 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 NDUFA11Q86Y39 141 aa4.66□□□□□ -1.66
LMO3-225ENST00000541295 H0Y9J4 135 aa4.65□□□□□ -1.66
LMO3-225ENST00000541295 COX7A2P2O60397 106 aa4.65□□□□□ -1.66
LMO3-225ENST00000541295 GLI4P10075 376 aa4.65□□□□□ -1.66
LMO3-225ENST00000541295 PHF5AQ7RTV0 110 aaKnown RBP4.65□□□□□ -1.66
LMO3-225ENST00000541295 UBALD1Q8TB05 177 aa4.65□□□□□ -1.66
LMO3-225ENST00000541295 RNASE6Q93091 150 aaKnown RBP4.65□□□□□ -1.66
LMO3-225ENST00000541295 OPRPNQ99935 248 aaPredicted RBP4.65□□□□□ -1.66
LMO3-225ENST00000541295 CTSZQ9UBR2 303 aa4.65□□□□□ -1.66
LMO3-225ENST00000541295 TRGV8A0A0C4DH27 118 aa4.65□□□□□ -1.67
LMO3-225ENST00000541295 LINC00205P59089 165 aa4.65□□□□□ -1.67
LMO3-225ENST00000541295 ESRGQ1W209 222 aa4.65□□□□□ -1.67
LMO3-225ENST00000541295 KLF14Q8TD94 323 aaPredicted RBP4.65□□□□□ -1.67
LMO3-225ENST00000541295 CACNA1DQ01668 2161 aa4.65□□□□□ -1.67
LMO3-225ENST00000541295 SHANK1Q9Y566 2161 aa4.65□□□□□ -1.67
LMO3-225ENST00000541295 TMEM30CPA0ZSE6 113 aa4.65□□□□□ -1.67
LMO3-225ENST00000541295 TRIAP1O43715 76 aa4.65□□□□□ -1.67
LMO3-225ENST00000541295 ZNF826PQ6ZT77 177 aa4.65□□□□□ -1.67
LMO3-225ENST00000541295 TMEM190Q8WZ59 177 aa4.65□□□□□ -1.67
LMO3-225ENST00000541295 SPTBN1Q01082 2364 aaKnown RBP4.64□□□□□ -1.67
LMO3-225ENST00000541295 IGHV1-18A0A0C4DH31 117 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 TFF1P04155 84 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 PLGLAQ15195 96 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 SDIM1Q6ZPB5 146 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 HIGD1CA8MV81 97 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 H7BZZ5 65 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 C6orf99Q4VX62 202 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 GDF5OSQ5U4N7 250 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 Q6ZRM9 215 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 PRNTQ86SH4 94 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 TTTY13Q9BZ97 58 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 Q9HAA7 133 aa4.64□□□□□ -1.67
LMO3-225ENST00000541295 IGKV2D-26A0A0A0MRZ7 120 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 TRAV13-2A0A0B4J235 113 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 IGKV1D-33P01593 117 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 IGKV1-33P01594 117 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 MED14OSP0DP75 135 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 EGR2P11161 476 aaPredicted RBP4.63□□□□□ -1.67
LMO3-225ENST00000541295 ZNF706Q9Y5V0 76 aaPredicted RBP4.63□□□□□ -1.67
LMO3-225ENST00000541295 ABCA4P78363 2273 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 WNT9BO14905 357 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 IGKV3-15P01624 115 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 CFC1BP0CG36 223 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 CFC1P0CG37 223 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 ZNF138P52744 262 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 FGF12P61328 243 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 SPENQ96T58 3664 aaKnown RBP4.63□□□□□ -1.67
LMO3-225ENST00000541295 BUB1B-PAK6H3BSN5 160 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 SPTSSBQ8NFR3 76 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 ZNF355PQ9NSJ1 428 aa4.63□□□□□ -1.67
LMO3-225ENST00000541295 IGKV1D-13A0A0B4J2D9 117 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms