RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 C14orf178Q8N769 122 aaPredicted RBP11.52□□□□□ -0.57
CD9-209ENST00000540891 PKD1P98161 4303 aa11.51□□□□□ -0.57
CD9-209ENST00000540891 GZMBP10144 247 aa11.51□□□□□ -0.57
CD9-209ENST00000540891 FAM74A4Q5TZK3 123 aa11.51□□□□□ -0.57
CD9-209ENST00000540891 DYNC1H1Q14204 4646 aaKnown RBP11.51□□□□□ -0.57
CD9-209ENST00000540891 MUC21A0A0G2JKD1 596 aa11.5□□□□□ -0.57
CD9-209ENST00000540891 MUC21A0A140T8X8 626 aa11.5□□□□□ -0.57
CD9-209ENST00000540891 TMEM250H0YL14 139 aa11.5□□□□□ -0.57
CD9-209ENST00000540891 TNP2Q05952 138 aa11.5□□□□□ -0.57
CD9-209ENST00000540891 DNAH11Q96DT5 4516 aa11.5□□□□□ -0.57
CD9-209ENST00000540891 GAGE12JA6NER3 117 aa11.49□□□□□ -0.57
CD9-209ENST00000540891 K7EN84 100 aa11.49□□□□□ -0.57
CD9-209ENST00000540891 IGLC6P0CF74 106 aa11.49□□□□□ -0.57
CD9-209ENST00000540891 GAGE1Q13065 139 aa11.49□□□□□ -0.57
CD9-209ENST00000540891 GAGE4Q13068 117 aa11.49□□□□□ -0.57
CD9-209ENST00000540891 GAGE5Q13069 117 aa11.49□□□□□ -0.57
CD9-209ENST00000540891 GAGE13Q4V321 117 aa11.49□□□□□ -0.57
CD9-209ENST00000540891 TOR2AQ5JU69 321 aa11.49□□□□□ -0.57
CD9-209ENST00000540891 OR2D3Q8NGH3 330 aa11.49□□□□□ -0.57
CD9-209ENST00000540891 OCC1Q8TAD7 63 aa11.49□□□□□ -0.57
CD9-209ENST00000540891 DAZAP1Q96EP5 407 aaKnown RBP11.49□□□□□ -0.57
CD9-209ENST00000540891 DNAH10OSP0CZ25 163 aa11.48□□□□□ -0.57
CD9-209ENST00000540891 ATP6V0E2Q8NHE4 81 aa11.48□□□□□ -0.57
CD9-209ENST00000540891 FAM210AQ96ND0 272 aa11.48□□□□□ -0.57
CD9-209ENST00000540891 P01737 135 aa11.47□□□□□ -0.57
CD9-209ENST00000540891 BTF3P20290 206 aaKnown RBP11.47□□□□□ -0.57
CD9-209ENST00000540891 LINC00315P59091 139 aa11.47□□□□□ -0.57
CD9-209ENST00000540891 RPS20P60866 119 aaKnown RBP11.47□□□□□ -0.57
CD9-209ENST00000540891 SPANXN1Q5VSR9 72 aa11.47□□□□□ -0.57
CD9-209ENST00000540891 NUDT10Q8NFP7 164 aa11.47□□□□□ -0.57
CD9-209ENST00000540891 NUDT11Q96G61 164 aa11.47□□□□□ -0.57
CD9-209ENST00000540891 BIN3Q9NQY0 253 aa11.47□□□□□ -0.57
CD9-209ENST00000540891 LY96Q9Y6Y9 160 aa11.47□□□□□ -0.57
CD9-209ENST00000540891 PKHD1P08F94 4074 aa11.47□□□□□ -0.57
CD9-209ENST00000540891 SSTP61278 116 aa11.46□□□□□ -0.57
CD9-209ENST00000540891 TEX261Q6UWH6 196 aa11.46□□□□□ -0.57
CD9-209ENST00000540891 Q6ZRN7 208 aaPredicted RBP11.46□□□□□ -0.57
CD9-209ENST00000540891 FER1L6-AS1Q8NA97 138 aa11.46□□□□□ -0.57
CD9-209ENST00000540891 GTSF1LQ9H1H1 148 aa11.46□□□□□ -0.57
CD9-209ENST00000540891 KIF25-AS1Q9Y6Z4 181 aa11.46□□□□□ -0.57
CD9-209ENST00000540891 NDUFS6O75380 124 aaKnown RBP11.45□□□□□ -0.58
CD9-209ENST00000540891 LELP1Q5T871 98 aa11.45□□□□□ -0.58
CD9-209ENST00000540891 EIF5A2Q9GZV4 153 aaKnown RBP11.45□□□□□ -0.58
CD9-209ENST00000540891 RNASE7Q9H1E1 156 aaKnown RBP11.45□□□□□ -0.58
CD9-209ENST00000540891 TNFRSF18Q9Y5U5 241 aa11.45□□□□□ -0.58
CD9-209ENST00000540891 IGHV3-38A0A0C4DH36 116 aa11.44□□□□□ -0.58
CD9-209ENST00000540891 SRP19P09132 144 aaKnown RBP11.44□□□□□ -0.58
CD9-209ENST00000540891 TPPP3Q9BW30 176 aa11.44□□□□□ -0.58
CD9-209ENST00000540891 MSRB1Q9NZV6 116 aa11.44□□□□□ -0.58
CD9-209ENST00000540891 CEBPGP53567 150 aa11.43□□□□□ -0.58
CD9-209ENST00000540891 RAB4BP61018 213 aa11.43□□□□□ -0.58
CD9-209ENST00000540891 OR10J3Q5JRS4 329 aa11.43□□□□□ -0.58
CD9-209ENST00000540891 TRBV10-1A0A0K0K1A3 114 aa11.42□□□□□ -0.58
CD9-209ENST00000540891 XKRY2A2RUG3 117 aa11.42□□□□□ -0.58
CD9-209ENST00000540891 K7EP13 123 aa11.42□□□□□ -0.58
CD9-209ENST00000540891 EVI2AP22794 236 aa11.42□□□□□ -0.58
CD9-209ENST00000540891 ZNF56Q15929 161 aa11.42□□□□□ -0.58
CD9-209ENST00000540891 LINC01556Q5JQF7 62 aa11.42□□□□□ -0.58
CD9-209ENST00000540891 LYZL1Q6UWQ5 148 aa11.42□□□□□ -0.58
CD9-209ENST00000540891 AP1S3Q96PC3 154 aa11.42□□□□□ -0.58
CD9-209ENST00000540891 RPP21Q9H633 154 aaKnown RBP11.42□□□□□ -0.58
CD9-209ENST00000540891 KIAA1109Q2LD37 5005 aa11.41□□□□□ -0.58
CD9-209ENST00000540891 TRAV9-2A0A087WT02 112 aa11.41□□□□□ -0.58
CD9-209ENST00000540891 TRAV8-6A0A0B4J262 113 aa11.41□□□□□ -0.58
CD9-209ENST00000540891 CTRLP40313 264 aa11.41□□□□□ -0.58
CD9-209ENST00000540891 CACNG7P62955 275 aa11.41□□□□□ -0.58
CD9-209ENST00000540891 OR10G8Q8NGN5 311 aa11.41□□□□□ -0.58
CD9-209ENST00000540891 C9JQL5 133 aa11.4□□□□□ -0.58
CD9-209ENST00000540891 F2Z2F3 143 aa11.4□□□□□ -0.58
CD9-209ENST00000540891 UBE2D3P61077 147 aa11.4□□□□□ -0.58
CD9-209ENST00000540891 UBE2D2P62837 147 aa11.4□□□□□ -0.58
CD9-209ENST00000540891 FAM231DQ6ZW35 169 aa11.4□□□□□ -0.58
CD9-209ENST00000540891 Q8N3U1 123 aa11.4□□□□□ -0.58
CD9-209ENST00000540891 NEXN-AS1Q8NBZ9 246 aa11.4□□□□□ -0.58
CD9-209ENST00000540891 SMIM7Q9BQ49 75 aa11.4□□□□□ -0.58
CD9-209ENST00000540891 TRBV7-3A0A075B6L6 115 aa11.39□□□□□ -0.59
CD9-209ENST00000540891 RPL36AP83881 106 aaKnown RBP11.39□□□□□ -0.59
CD9-209ENST00000540891 SRSF3P84103 164 aaKnown RBP11.39□□□□□ -0.59
CD9-209ENST00000540891 LINC01551Q86U37 167 aa11.39□□□□□ -0.59
CD9-209ENST00000540891 GTSF1Q8WW33 167 aa11.39□□□□□ -0.59
CD9-209ENST00000540891 RPL36ALQ969Q0 106 aaKnown RBP11.39□□□□□ -0.59
CD9-209ENST00000540891 CNFNQ9BYD5 112 aa11.39□□□□□ -0.59
CD9-209ENST00000540891 HERC2O95714 4834 aa11.38□□□□□ -0.59
CD9-209ENST00000540891 ZNF727A8MUV8 499 aa11.38□□□□□ -0.59
CD9-209ENST00000540891 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
CD9-209ENST00000540891 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
CD9-209ENST00000540891 IGHV3-30-3P0DP02 117 aa11.38□□□□□ -0.59
CD9-209ENST00000540891 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
CD9-209ENST00000540891 NTF3P20783 257 aa11.38□□□□□ -0.59
CD9-209ENST00000540891 WDR73Q6P4I2 378 aa11.38□□□□□ -0.59
CD9-209ENST00000540891 C10orf126Q8N4M7 172 aa11.38□□□□□ -0.59
CD9-209ENST00000540891 A0A087WWC5 75 aa11.37□□□□□ -0.59
CD9-209ENST00000540891 F5H697 171 aa11.37□□□□□ -0.59
CD9-209ENST00000540891 GATCO43716 136 aaKnown RBP11.37□□□□□ -0.59
CD9-209ENST00000540891 SMIM17P0DL12 118 aa11.37□□□□□ -0.59
CD9-209ENST00000540891 IBA57-AS1B1ANH7 110 aa11.36□□□□□ -0.59
CD9-209ENST00000540891 ERVFC1-1P60608 527 aa11.36□□□□□ -0.59
CD9-209ENST00000540891 NFE4Q86UQ8 179 aa11.36□□□□□ -0.59
CD9-209ENST00000540891 M0QY20 66 aa11.35□□□□□ -0.59
CD9-209ENST00000540891 MGPP08493 103 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms