RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 CRYGAP11844 174 aa7.24□□□□□ -1.25
CTNNA1-243ENST00000540387 BEX4Q9NWD9 120 aaPredicted RBP7.24□□□□□ -1.25
CTNNA1-243ENST00000540387 J3QKU1 62 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 ORM1P02763 201 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 Q1RN00 199 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 PSMG3-AS1Q96PY0 264 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 SPG11Q96JI7 2443 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 CRYBG3Q68DQ2 2970 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 IGKV2-40A0A087WW87 121 aaPredicted RBP7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 H7C423 109 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 OXTP01178 125 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 IGKV2D-40P01614 121 aaPredicted RBP7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 TRGV3P03979 118 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 PLGLAQ15195 96 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 DEFB121Q5J5C9 76 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 IL17RELQ6ZVW7 336 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 COX8CQ7Z4L0 72 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 DPH3Q96FX2 82 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 SPANXDQ9BXN6 97 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 DYNLRB1Q9NP97 96 aa7.23□□□□□ -1.25
CTNNA1-243ENST00000540387 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 Q5XG85 94 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 TOMM6Q96B49 74 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 C2orf48Q96LS8 159 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 METTL26Q96S19 204 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 CENPEQ02224 2701 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 hADV29S1A0JD25 119 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 ATP5G1P05496 136 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 APELAP0DMC3 54 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 TSPEAR-AS2P59090 65 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 FAM201AQ5SY85 155 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 Q8TAT8 98 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 SHANK2-AS3Q9BTD1 123 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 CYSTM1Q9H1C7 97 aa7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 ZNF256Q9Y2P7 627 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-243ENST00000540387 A0A0B4J2C4 111 aa7.21□□□□□ -1.25
CTNNA1-243ENST00000540387 SRRM5B3KS81 715 aa7.21□□□□□ -1.25
CTNNA1-243ENST00000540387 H3BT86 120 aa7.21□□□□□ -1.25
CTNNA1-243ENST00000540387 ERCC8Q13216 396 aa7.21□□□□□ -1.25
CTNNA1-243ENST00000540387 C14orf178Q8N769 122 aaPredicted RBP7.21□□□□□ -1.25
CTNNA1-243ENST00000540387 TACC2O95359 2948 aa7.21□□□□□ -1.26
CTNNA1-243ENST00000540387 DSCAMO60469 2012 aa7.21□□□□□ -1.26
CTNNA1-243ENST00000540387 TRIAP1O43715 76 aa7.21□□□□□ -1.26
CTNNA1-243ENST00000540387 PVRIGQ6DKI7 326 aa7.21□□□□□ -1.26
CTNNA1-243ENST00000540387 RNF125Q96EQ8 232 aa7.21□□□□□ -1.26
CTNNA1-243ENST00000540387 TPSG1Q9NRR2 321 aa7.21□□□□□ -1.26
CTNNA1-243ENST00000540387 FASNP49327 2511 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 C11orf86A6NJI1 115 aa7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 H3BRN7 92 aa7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 ZNF833PQ6ZTB9 187 aa7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 SMIM2Q9BVW6 85 aa7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 DOPEY2Q9Y3R5 2298 aa7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 TRAV41A0A0B4J266 112 aa7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 TRACP01848 142 aa7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 DUX4L9Q6RFH8 374 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 SMCR5Q8TEV8 140 aa7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 CCL17Q92583 94 aa7.2□□□□□ -1.26
CTNNA1-243ENST00000540387 TRBV30A0A0K0K1B3 111 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 LY6HO94772 140 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 LHBP01229 141 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 IGLV2-23P01705 113 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 SRSF2Q01130 221 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 ORMDL2Q53FV1 153 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 C11orf71Q6IPW1 123 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 RNF7Q9UBF6 113 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 LYNX1G3V0Z9 82 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 CRYGDP07320 174 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 LYNX1P0DP58 116 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 DEFB108BQ8NET1 73 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 AMELXQ99217 191 aa7.19□□□□□ -1.26
CTNNA1-243ENST00000540387 PTPN13Q12923 2485 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 CELSR2Q9HCU4 2923 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 TMEM258P61165 79 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 LINC00477Q96M19 166 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 DSCR8Q96T75 97 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 IGLV4-69A0A075B6H9 119 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 J3QLI3 93 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 IGKV1-17P01599 117 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 C2orf66Q6UXQ4 117 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 LINC00643Q86TS7 51 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 MUSTN1Q8IVN3 82 aa7.18□□□□□ -1.26
CTNNA1-243ENST00000540387 ACYP1P07311 99 aa7.17□□□□□ -1.26
CTNNA1-243ENST00000540387 CNTFRP26992 372 aa7.17□□□□□ -1.26
CTNNA1-243ENST00000540387 MRGPRG-AS1Q2M3A8 158 aa7.17□□□□□ -1.26
CTNNA1-243ENST00000540387 EEF1AKMT3Q96AZ1 226 aa7.17□□□□□ -1.26
CTNNA1-243ENST00000540387 TMEM178BH3BS89 294 aa7.17□□□□□ -1.26
CTNNA1-243ENST00000540387 CRYGBP07316 175 aa7.17□□□□□ -1.26
CTNNA1-243ENST00000540387 PDE6HQ13956 83 aa7.17□□□□□ -1.26
CTNNA1-243ENST00000540387 FAM19A4Q96LR4 140 aa7.17□□□□□ -1.26
CTNNA1-243ENST00000540387 JPT2Q9H910 190 aa7.17□□□□□ -1.26
CTNNA1-243ENST00000540387 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-243ENST00000540387 TMEM223A0PJW6 202 aa7.16□□□□□ -1.26
CTNNA1-243ENST00000540387 C5orf38Q86SI9 138 aa7.16□□□□□ -1.26
CTNNA1-243ENST00000540387 GCN1Q92616 2671 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-243ENST00000540387 POLQO75417 2590 aa7.16□□□□□ -1.26
CTNNA1-243ENST00000540387 J3QQQ9 107 aa7.16□□□□□ -1.26
CTNNA1-243ENST00000540387 SPRY2O43597 315 aa7.16□□□□□ -1.26
CTNNA1-243ENST00000540387 FBN2P35556 2912 aa7.16□□□□□ -1.26
CTNNA1-243ENST00000540387 ABCA12Q86UK0 2595 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms