RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CFHR3Q02985 330 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 J3QQQ9 107 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 SPRY2O43597 315 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 IGHV4-39P01824 125 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 LGALS3P17931 250 aaKnown RBP9.9□□□□□ -0.82
UBE3B-209ENST00000539584 TMEM170BQ5T4T1 132 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 TEN1Q86WV5 123 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 PPDPFLQ8WWR9 84 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 PRO1854Q9UHT4 67 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 IGHV3-16A0A0C4DH30 117 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 H3BUX3 64 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 LEPROTO15243 131 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 SMCPP49901 116 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-209ENST00000539584 DEFB1P60022 68 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 BRD3OSQ6XYD6 125 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 RNF152Q8N8N0 203 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 MDFICQ9P1T7 246 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 PTPRZ1P23471 2315 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-209ENST00000539584 TACC2O95359 2948 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 A0A0J9YX75 114 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 M0QY20 66 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 CFC1P0CG37 223 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 CRYBA4P53673 196 aa9.89□□□□□ -0.83
UBE3B-209ENST00000539584 SNRPD3P62318 126 aaKnown RBP9.89□□□□□ -0.83
UBE3B-209ENST00000539584 ZNRF2Q8NHG8 242 aa9.88□□□□□ -0.83
UBE3B-209ENST00000539584 AMELXQ99217 191 aa9.88□□□□□ -0.83
UBE3B-209ENST00000539584 EDA2RQ9HAV5 297 aa9.88□□□□□ -0.83
UBE3B-209ENST00000539584 IGHV3OR16-10A0A075B7F0 116 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 TRAV12-3A0A0B4J271 114 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 A8MWV9 139 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 RPL39P62891 51 aaKnown RBP9.87□□□□□ -0.83
UBE3B-209ENST00000539584 LY6EQ16553 131 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 CLEC2AQ6UVW9 174 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 ZNF256Q9Y2P7 627 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-209ENST00000539584 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 A0A087WWL8 130 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-209ENST00000539584 A0A0B4J2C4 111 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 TMEM223A0PJW6 202 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 TMEM262E9PQX1 116 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 C10orf105Q8TEF2 133 aa9.87□□□□□ -0.83
UBE3B-209ENST00000539584 I3L3M4 83 aa9.86□□□□□ -0.83
UBE3B-209ENST00000539584 IGHV4-38-2P0DP08 117 aa9.86□□□□□ -0.83
UBE3B-209ENST00000539584 INSL3P51460 131 aa9.86□□□□□ -0.83
UBE3B-209ENST00000539584 BLCAPP62952 87 aa9.86□□□□□ -0.83
UBE3B-209ENST00000539584 C20orf203Q8NBC4 194 aa9.86□□□□□ -0.83
UBE3B-209ENST00000539584 JPT2Q9H910 190 aa9.86□□□□□ -0.83
UBE3B-209ENST00000539584 IGHV1OR15-1A0A075B7D0 117 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 IGHV4-61A0A0C4DH41 118 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 TCL1BO95988 128 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 ZNF56Q15929 161 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 PYGO1Q9Y3Y4 419 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 SPTA1P02549 2419 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 TRGV11A0A075B6L2 103 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 P0DMU3 169 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 FAM231AP0DMU4 169 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 FAM231CP0DMU5 169 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 GATA3P23771 443 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 PSMB8P28062 276 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 TSPEAR-AS2P59090 65 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 Q6ZS46 218 aa9.85□□□□□ -0.83
UBE3B-209ENST00000539584 MUC4Q99102 2169 aa9.84□□□□□ -0.83
UBE3B-209ENST00000539584 SCGB1C2P0DMR2 95 aa9.84□□□□□ -0.83
UBE3B-209ENST00000539584 EMP1P54849 157 aa9.84□□□□□ -0.83
UBE3B-209ENST00000539584 CDIP1Q9H305 208 aa9.84□□□□□ -0.83
UBE3B-209ENST00000539584 K7EQG2 157 aa9.83□□□□□ -0.84
UBE3B-209ENST00000539584 RHODO00212 210 aa9.83□□□□□ -0.84
UBE3B-209ENST00000539584 MSMBP08118 114 aa9.83□□□□□ -0.84
UBE3B-209ENST00000539584 FAM74A4Q5TZK3 123 aa9.83□□□□□ -0.84
UBE3B-209ENST00000539584 ZNF418Q8TF45 676 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-209ENST00000539584 LINC01600Q96MT4 127 aa9.83□□□□□ -0.84
UBE3B-209ENST00000539584 LRBAP50851 2863 aa9.83□□□□□ -0.84
UBE3B-209ENST00000539584 PIK3CD-AS1Q5SR53 167 aa9.83□□□□□ -0.84
UBE3B-209ENST00000539584 Q8N1Y9 231 aa9.83□□□□□ -0.84
UBE3B-209ENST00000539584 DCHS2Q6V1P9 2916 aa9.83□□□□□ -0.84
UBE3B-209ENST00000539584 ZNF688P0C7X2 276 aa9.82□□□□□ -0.84
UBE3B-209ENST00000539584 SRD5A1P18405 259 aa9.82□□□□□ -0.84
UBE3B-209ENST00000539584 CKS1BP61024 79 aa9.82□□□□□ -0.84
UBE3B-209ENST00000539584 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
UBE3B-209ENST00000539584 HRNRQ86YZ3 2850 aaPredicted RBP9.82□□□□□ -0.84
UBE3B-209ENST00000539584 IGHV3-33P01772 117 aa9.82□□□□□ -0.84
UBE3B-209ENST00000539584 ZNF22P17026 224 aaPredicted RBP9.82□□□□□ -0.84
UBE3B-209ENST00000539584 TMEM263Q8WUH6 116 aaKnown RBP9.82□□□□□ -0.84
UBE3B-209ENST00000539584 CCL19Q99731 98 aa9.82□□□□□ -0.84
UBE3B-209ENST00000539584 A4D1N5 150 aa9.81□□□□□ -0.84
UBE3B-209ENST00000539584 SPINK8P0C7L1 97 aa9.81□□□□□ -0.84
UBE3B-209ENST00000539584 CSMD1Q96PZ7 3565 aa9.81□□□□□ -0.84
UBE3B-209ENST00000539584 IGLV4-3A0A075B6K6 122 aa9.8□□□□□ -0.84
UBE3B-209ENST00000539584 B4DSR2 109 aa9.8□□□□□ -0.84
UBE3B-209ENST00000539584 C19orf84I3L1E1 186 aa9.8□□□□□ -0.84
UBE3B-209ENST00000539584 Q6ZUT4 128 aa9.8□□□□□ -0.84
UBE3B-209ENST00000539584 CARD19Q96LW7 228 aa9.8□□□□□ -0.84
UBE3B-209ENST00000539584 CACNA1BQ00975 2339 aa9.8□□□□□ -0.84
UBE3B-209ENST00000539584 MUC6Q6W4X9 2439 aa9.8□□□□□ -0.84
UBE3B-209ENST00000539584 M0R2P5 195 aa9.8□□□□□ -0.84
UBE3B-209ENST00000539584 SLC25A20O43772 301 aa9.8□□□□□ -0.84
UBE3B-209ENST00000539584 MRPS36P82909 103 aaKnown RBP9.8□□□□□ -0.84
UBE3B-209ENST00000539584 RNF183Q96D59 192 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms