RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 C2orf66Q6UXQ4 117 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 TOMM6Q96B49 74 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 SMIM2Q9BVW6 85 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 SPRR3Q9UBC9 169 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 TRBV10-2A0A0K0K1G8 114 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 hADV29S1A0JD25 119 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 RNF223E7ERA6 249 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 IGKV3-15P01624 115 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 IGHG3P01860 377 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 RPL27AP46776 148 aaKnown RBP8.11□□□□□ -1.11
RTN3-208ENST00000537981 PVRIGQ6DKI7 326 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 MUSTN1Q8IVN3 82 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 IGHV3-35A0A0C4DH35 117 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 IGHV3-23P01764 117 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 ATXN8Q156A1 80 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 NACAE9PAV3 2078 aa8.11□□□□□ -1.11
RTN3-208ENST00000537981 IGHV7-4-1A0A0J9YVY3 117 aa8.1□□□□□ -1.11
RTN3-208ENST00000537981 TMEM170BQ5T4T1 132 aa8.1□□□□□ -1.11
RTN3-208ENST00000537981 CNEP1R1Q8N9A8 125 aa8.1□□□□□ -1.11
RTN3-208ENST00000537981 ZNRF2Q8NHG8 242 aa8.1□□□□□ -1.11
RTN3-208ENST00000537981 DSCR8Q96T75 97 aa8.1□□□□□ -1.11
RTN3-208ENST00000537981 ABCA4P78363 2273 aa8.1□□□□□ -1.11
RTN3-208ENST00000537981 IGHV1-18A0A0C4DH31 117 aa8.1□□□□□ -1.11
RTN3-208ENST00000537981 SMAD5-AS1Q9Y6J3 95 aa8.1□□□□□ -1.11
RTN3-208ENST00000537981 CUBNO60494 3623 aa8.1□□□□□ -1.11
RTN3-208ENST00000537981 TRGV5A0A0B4J1U4 118 aa8.09□□□□□ -1.11
RTN3-208ENST00000537981 ADARB2-AS1A8MUL3 147 aa8.09□□□□□ -1.11
RTN3-208ENST00000537981 K7EIM0 57 aa8.09□□□□□ -1.11
RTN3-208ENST00000537981 RPL39P62891 51 aaKnown RBP8.09□□□□□ -1.11
RTN3-208ENST00000537981 TEX36Q5VZQ5 186 aa8.09□□□□□ -1.11
RTN3-208ENST00000537981 CACNA1AO00555 2505 aa8.09□□□□□ -1.11
RTN3-208ENST00000537981 NPC2P61916 151 aa8.09□□□□□ -1.11
RTN3-208ENST00000537981 LYPD1Q8N2G4 141 aa8.09□□□□□ -1.11
RTN3-208ENST00000537981 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
RTN3-208ENST00000537981 IGF2RP11717 2491 aa8.09□□□□□ -1.11
RTN3-208ENST00000537981 P0DMU3 169 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 FAM231AP0DMU4 169 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 FAM231CP0DMU5 169 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 LY6DQ14210 128 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 C2orf48Q96LS8 159 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 METTL26Q96S19 204 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 CELSR1Q9NYQ6 3014 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 UQCRQO14949 82 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 UBE2E1P51965 193 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 VMA21Q3ZAQ7 101 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 C19orf54Q5BKX5 351 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 COX8CQ7Z4L0 72 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
RTN3-208ENST00000537981 A0A0G2JNJ9 132 aa8.07□□□□□ -1.12
RTN3-208ENST00000537981 NTN3O00634 580 aaPredicted RBP8.07□□□□□ -1.12
RTN3-208ENST00000537981 OPRPNQ99935 248 aaPredicted RBP8.07□□□□□ -1.12
RTN3-208ENST00000537981 LINC00574Q9H8X3 128 aa8.07□□□□□ -1.12
RTN3-208ENST00000537981 Q9UFV3 132 aa8.07□□□□□ -1.12
RTN3-208ENST00000537981 SUMO2P61956 95 aaKnown RBP8.07□□□□□ -1.12
RTN3-208ENST00000537981 Q5XG85 94 aa8.07□□□□□ -1.12
RTN3-208ENST00000537981 TMEM200BQ69YZ2 307 aa8.07□□□□□ -1.12
RTN3-208ENST00000537981 OR13C6PQ8NH95 151 aa8.07□□□□□ -1.12
RTN3-208ENST00000537981 MUC4Q99102 2169 aa8.07□□□□□ -1.12
RTN3-208ENST00000537981 MED13LQ71F56 2210 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 J3QQQ9 107 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 OVOL1O14753 267 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 PLGLAQ15195 96 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 SPANXN1Q5VSR9 72 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 ACACBO00763 2458 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 PTPRQQ9UMZ3 2332 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 CACNA1GO43497 2377 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 TRAV17A0A0B4J275 112 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 IGHV3-66A0A0C4DH42 116 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 A0A1B0GX51 115 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 GAGE2AQ6NT46 116 aa8.06□□□□□ -1.12
RTN3-208ENST00000537981 IGHV3OR16-13A0A075B7E8 117 aa8.05□□□□□ -1.12
RTN3-208ENST00000537981 IGHV3-74A0A0B4J1X5 117 aa8.05□□□□□ -1.12
RTN3-208ENST00000537981 TMEM223A0PJW6 202 aa8.05□□□□□ -1.12
RTN3-208ENST00000537981 M0R381 172 aa8.05□□□□□ -1.12
RTN3-208ENST00000537981 IGF1P05019 195 aa8.05□□□□□ -1.12
RTN3-208ENST00000537981 GFRALQ6UXV0 394 aa8.05□□□□□ -1.12
RTN3-208ENST00000537981 TRAV8-3A0A0A6YYJ7 113 aa8.05□□□□□ -1.12
RTN3-208ENST00000537981 PRR9Q5T870 116 aa8.05□□□□□ -1.12
RTN3-208ENST00000537981 FAM19A4Q96LR4 140 aa8.05□□□□□ -1.12
RTN3-208ENST00000537981 TP53TG1Q9Y2A0 90 aa8.05□□□□□ -1.12
RTN3-208ENST00000537981 ORMDL2Q53FV1 153 aa8.04□□□□□ -1.12
RTN3-208ENST00000537981 Q6ZT83 130 aa8.04□□□□□ -1.12
RTN3-208ENST00000537981 DPH3Q96FX2 82 aa8.04□□□□□ -1.12
RTN3-208ENST00000537981 A0A0B4J2C4 111 aa8.04□□□□□ -1.12
RTN3-208ENST00000537981 TMEM219Q86XT9 240 aa8.04□□□□□ -1.12
RTN3-208ENST00000537981 LINC00477Q96M19 166 aa8.04□□□□□ -1.12
RTN3-208ENST00000537981 RNF7Q9UBF6 113 aa8.04□□□□□ -1.12
RTN3-208ENST00000537981 ACACAQ13085 2346 aa8.04□□□□□ -1.12
RTN3-208ENST00000537981 MGPP08493 103 aa8.03□□□□□ -1.12
RTN3-208ENST00000537981 COX7CP15954 63 aa8.03□□□□□ -1.12
RTN3-208ENST00000537981 DLX6P56179 175 aa8.03□□□□□ -1.12
RTN3-208ENST00000537981 CCL8P80075 99 aa8.03□□□□□ -1.12
RTN3-208ENST00000537981 PDE6HQ13956 83 aa8.03□□□□□ -1.12
RTN3-208ENST00000537981 LYPD2Q6UXB3 125 aa8.03□□□□□ -1.12
RTN3-208ENST00000537981 ICOSQ9Y6W8 199 aa8.03□□□□□ -1.12
RTN3-208ENST00000537981 APC2O95996 2303 aa8.03□□□□□ -1.12
RTN3-208ENST00000537981 TINCRA0A1B0GVN0 87 aa8.03□□□□□ -1.12
RTN3-208ENST00000537981 F8W735 103 aaPredicted RBP8.03□□□□□ -1.12
RTN3-208ENST00000537981 LINC01600Q96MT4 127 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms