RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 RHODO00212 210 aa11.79□□□□□ -0.52
GPN3-202ENST00000537466 OR5AL1P0C617 328 aa11.79□□□□□ -0.52
GPN3-202ENST00000537466 GZMBP10144 247 aa11.79□□□□□ -0.52
GPN3-202ENST00000537466 TNP2Q05952 138 aa11.79□□□□□ -0.52
GPN3-202ENST00000537466 DAZAP1Q96EP5 407 aaKnown RBP11.79□□□□□ -0.52
GPN3-202ENST00000537466 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
GPN3-202ENST00000537466 LINC00694P0DN24 101 aa11.78□□□□□ -0.52
GPN3-202ENST00000537466 TIRAPP58753 221 aa11.78□□□□□ -0.52
GPN3-202ENST00000537466 GAGE1Q13065 139 aa11.78□□□□□ -0.52
GPN3-202ENST00000537466 GAGE4Q13068 117 aa11.78□□□□□ -0.52
GPN3-202ENST00000537466 GAGE5Q13069 117 aa11.78□□□□□ -0.52
GPN3-202ENST00000537466 GAGE13Q4V321 117 aa11.78□□□□□ -0.52
GPN3-202ENST00000537466 OR2D3Q8NGH3 330 aa11.78□□□□□ -0.52
GPN3-202ENST00000537466 PKHD1P08F94 4074 aa11.78□□□□□ -0.52
GPN3-202ENST00000537466 LINC00315P59091 139 aa11.77□□□□□ -0.52
GPN3-202ENST00000537466 SSTP61278 116 aa11.77□□□□□ -0.52
GPN3-202ENST00000537466 TOR2AQ5JU69 321 aa11.77□□□□□ -0.52
GPN3-202ENST00000537466 ATP6V0E2Q8NHE4 81 aa11.77□□□□□ -0.52
GPN3-202ENST00000537466 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
GPN3-202ENST00000537466 K7EN84 100 aa11.76□□□□□ -0.53
GPN3-202ENST00000537466 SPANXN1Q5VSR9 72 aa11.76□□□□□ -0.53
GPN3-202ENST00000537466 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
GPN3-202ENST00000537466 LY96Q9Y6Y9 160 aa11.76□□□□□ -0.53
GPN3-202ENST00000537466 P01737 135 aa11.76□□□□□ -0.53
GPN3-202ENST00000537466 IGLC6P0CF74 106 aa11.76□□□□□ -0.53
GPN3-202ENST00000537466 TNFRSF18Q9Y5U5 241 aa11.76□□□□□ -0.53
GPN3-202ENST00000537466 DNAH11Q96DT5 4516 aa11.75□□□□□ -0.53
GPN3-202ENST00000537466 DNAH10OSP0CZ25 163 aa11.75□□□□□ -0.53
GPN3-202ENST00000537466 RPS20P60866 119 aaKnown RBP11.75□□□□□ -0.53
GPN3-202ENST00000537466 NUDT10Q8NFP7 164 aa11.75□□□□□ -0.53
GPN3-202ENST00000537466 NUDT11Q96G61 164 aa11.75□□□□□ -0.53
GPN3-202ENST00000537466 FAM210AQ96ND0 272 aa11.75□□□□□ -0.53
GPN3-202ENST00000537466 TPPP3Q9BW30 176 aa11.75□□□□□ -0.53
GPN3-202ENST00000537466 EIF5A2Q9GZV4 153 aaKnown RBP11.75□□□□□ -0.53
GPN3-202ENST00000537466 GTSF1LQ9H1H1 148 aa11.75□□□□□ -0.53
GPN3-202ENST00000537466 BIN3Q9NQY0 253 aa11.75□□□□□ -0.53
GPN3-202ENST00000537466 CEBPGP53567 150 aa11.74□□□□□ -0.53
GPN3-202ENST00000537466 FER1L6-AS1Q8NA97 138 aa11.74□□□□□ -0.53
GPN3-202ENST00000537466 RNASE7Q9H1E1 156 aaKnown RBP11.74□□□□□ -0.53
GPN3-202ENST00000537466 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
GPN3-202ENST00000537466 OR10J3Q5JRS4 329 aa11.73□□□□□ -0.53
GPN3-202ENST00000537466 LELP1Q5T871 98 aa11.73□□□□□ -0.53
GPN3-202ENST00000537466 TEX261Q6UWH6 196 aa11.73□□□□□ -0.53
GPN3-202ENST00000537466 Q6ZRN7 208 aaPredicted RBP11.73□□□□□ -0.53
GPN3-202ENST00000537466 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
GPN3-202ENST00000537466 IGHV3-38A0A0C4DH36 116 aa11.72□□□□□ -0.53
GPN3-202ENST00000537466 EVI2AP22794 236 aa11.72□□□□□ -0.53
GPN3-202ENST00000537466 ZNF56Q15929 161 aa11.72□□□□□ -0.53
GPN3-202ENST00000537466 MSRB1Q9NZV6 116 aa11.72□□□□□ -0.53
GPN3-202ENST00000537466 KIF25-AS1Q9Y6Z4 181 aa11.72□□□□□ -0.53
GPN3-202ENST00000537466 DYNC1H1Q14204 4646 aaKnown RBP11.72□□□□□ -0.53
GPN3-202ENST00000537466 TRAV9-2A0A087WT02 112 aa11.71□□□□□ -0.53
GPN3-202ENST00000537466 XKRY2A2RUG3 117 aa11.71□□□□□ -0.53
GPN3-202ENST00000537466 RAB4BP61018 213 aa11.71□□□□□ -0.53
GPN3-202ENST00000537466 SRP19P09132 144 aaKnown RBP11.7□□□□□ -0.54
GPN3-202ENST00000537466 LINC01556Q5JQF7 62 aa11.7□□□□□ -0.54
GPN3-202ENST00000537466 LYZL1Q6UWQ5 148 aa11.7□□□□□ -0.54
GPN3-202ENST00000537466 RPP21Q9H633 154 aaKnown RBP11.7□□□□□ -0.54
GPN3-202ENST00000537466 TRBV10-1A0A0K0K1A3 114 aa11.7□□□□□ -0.54
GPN3-202ENST00000537466 AP1S3Q96PC3 154 aa11.7□□□□□ -0.54
GPN3-202ENST00000537466 K7EP13 123 aa11.69□□□□□ -0.54
GPN3-202ENST00000537466 NDUFS6O75380 124 aaKnown RBP11.69□□□□□ -0.54
GPN3-202ENST00000537466 IGHV3-30P01768 117 aa11.69□□□□□ -0.54
GPN3-202ENST00000537466 IGHV3-33P01772 117 aa11.69□□□□□ -0.54
GPN3-202ENST00000537466 IGHV3-30-3P0DP02 117 aa11.69□□□□□ -0.54
GPN3-202ENST00000537466 IGHV3-30-5P0DP03 117 aa11.69□□□□□ -0.54
GPN3-202ENST00000537466 CACNG7P62955 275 aa11.69□□□□□ -0.54
GPN3-202ENST00000537466 SMIM7Q9BQ49 75 aa11.69□□□□□ -0.54
GPN3-202ENST00000537466 TRBV7-3A0A075B6L6 115 aa11.68□□□□□ -0.54
GPN3-202ENST00000537466 F2Z2F3 143 aa11.68□□□□□ -0.54
GPN3-202ENST00000537466 F5H697 171 aa11.68□□□□□ -0.54
GPN3-202ENST00000537466 SMIM17P0DL12 118 aa11.68□□□□□ -0.54
GPN3-202ENST00000537466 UBE2D3P61077 147 aa11.68□□□□□ -0.54
GPN3-202ENST00000537466 UBE2D2P62837 147 aa11.68□□□□□ -0.54
GPN3-202ENST00000537466 RPL36AP83881 106 aaKnown RBP11.68□□□□□ -0.54
GPN3-202ENST00000537466 Q8N3U1 123 aa11.68□□□□□ -0.54
GPN3-202ENST00000537466 NEXN-AS1Q8NBZ9 246 aa11.68□□□□□ -0.54
GPN3-202ENST00000537466 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
GPN3-202ENST00000537466 RPL36ALQ969Q0 106 aaKnown RBP11.68□□□□□ -0.54
GPN3-202ENST00000537466 CTRLP40313 264 aa11.67□□□□□ -0.54
GPN3-202ENST00000537466 C10orf126Q8N4M7 172 aa11.67□□□□□ -0.54
GPN3-202ENST00000537466 KIAA1109Q2LD37 5005 aa11.66□□□□□ -0.54
GPN3-202ENST00000537466 ZNF727A8MUV8 499 aa11.66□□□□□ -0.54
GPN3-202ENST00000537466 C9JQL5 133 aa11.66□□□□□ -0.54
GPN3-202ENST00000537466 NTF3P20783 257 aa11.66□□□□□ -0.54
GPN3-202ENST00000537466 FAM231DQ6ZW35 169 aa11.66□□□□□ -0.54
GPN3-202ENST00000537466 LINC01551Q86U37 167 aa11.66□□□□□ -0.54
GPN3-202ENST00000537466 GTSF1Q8WW33 167 aa11.66□□□□□ -0.54
GPN3-202ENST00000537466 A0A087WWC5 75 aa11.65□□□□□ -0.54
GPN3-202ENST00000537466 GATCO43716 136 aaKnown RBP11.65□□□□□ -0.54
GPN3-202ENST00000537466 MGPP08493 103 aa11.65□□□□□ -0.54
GPN3-202ENST00000537466 SRSF3P84103 164 aaKnown RBP11.65□□□□□ -0.54
GPN3-202ENST00000537466 NFE4Q86UQ8 179 aa11.65□□□□□ -0.54
GPN3-202ENST00000537466 IBA57-AS1B1ANH7 110 aa11.64□□□□□ -0.55
GPN3-202ENST00000537466 ERVFC1-1P60608 527 aa11.64□□□□□ -0.55
GPN3-202ENST00000537466 CNFNQ9BYD5 112 aa11.64□□□□□ -0.55
GPN3-202ENST00000537466 WDR73Q6P4I2 378 aa11.63□□□□□ -0.55
GPN3-202ENST00000537466 SPATA12Q7Z6I5 190 aa11.63□□□□□ -0.55
GPN3-202ENST00000537466 TRGC1P0CF51 173 aa11.63□□□□□ -0.55
GPN3-202ENST00000537466 SUMO4Q6EEV6 95 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms