RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 Q8WTZ3 238 aa3.27□□□□□ -1.89
CLIP1-207ENST00000536634 SLC25A39Q9BZJ4 359 aaPredicted RBP3.27□□□□□ -1.89
CLIP1-207ENST00000536634 VCX2Q9H322 139 aa3.27□□□□□ -1.89
CLIP1-207ENST00000536634 AUNIPQ9H7T9 357 aa3.27□□□□□ -1.89
CLIP1-207ENST00000536634 WFDC1Q9HC57 220 aa3.27□□□□□ -1.89
CLIP1-207ENST00000536634 TIMM8BQ9Y5J9 83 aaPredicted RBP3.27□□□□□ -1.89
CLIP1-207ENST00000536634 TRAV30A0A087WSZ9 112 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 TRAV1-2A0A0B4J238 106 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 A0A1W2PPV4 95 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 F6UZH7 168 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 H3BNG1 76 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 K7ERU9 68 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 CORTO00230 105 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 ISLRO14498 428 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 GSTZ1O43708 216 aaPredicted RBP3.26□□□□□ -1.89
CLIP1-207ENST00000536634 TSPAN13O95857 204 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 GCGP01275 180 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 GIPP09681 153 aaPredicted RBP3.26□□□□□ -1.89
CLIP1-207ENST00000536634 OR5AC1P0C628 307 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 CXCL3P19876 107 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 MLLT11Q13015 90 aaPredicted RBP3.26□□□□□ -1.89
CLIP1-207ENST00000536634 OCIAD2Q56VL3 154 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 KHDC3LQ587J8 217 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 COL5A1-AS1Q5SY13 56 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 IDNKQ5T6J7 187 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 TRIQKQ629K1 86 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 EIF5AL1Q6IS14 154 aaKnown RBP3.26□□□□□ -1.89
CLIP1-207ENST00000536634 SCXQ7RTU7 201 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 MTURNQ8N3F0 131 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 Q8N814 137 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 OR10J6PQ8NGY7 276 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 RPUSD4Q96CM3 377 aaKnown RBP3.26□□□□□ -1.89
CLIP1-207ENST00000536634 LINC01587Q99440 93 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 COMMD3Q9UBI1 195 aa3.26□□□□□ -1.89
CLIP1-207ENST00000536634 TRAV8-2A0A0B4J237 113 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 A0A0G2JRQ6 117 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 SMCO3A2RU48 225 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 PPP1R2P9O14990 202 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 GZMBP10144 247 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 PSMA1P25786 263 aaKnown RBP3.25□□□□□ -1.89
CLIP1-207ENST00000536634 SUB1P53999 127 aaKnown RBP eCLIP3.25□□□□□ -1.89
CLIP1-207ENST00000536634 SUPT4H1P63272 117 aaKnown RBP3.25□□□□□ -1.89
CLIP1-207ENST00000536634 WFDC2Q14508 124 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 LINC01620Q4KN68 170 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 C1orf194Q5T5A4 169 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 SAMD13Q5VXD3 122 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 WFDC10BQ8IUB3 73 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 CMTM1Q8IZ96 169 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 RNF182Q8N6D2 247 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 OR4D5Q8NGN0 318 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 OR2T35Q8NGX2 323 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 TMEM263Q8WUH6 116 aaKnown RBP3.25□□□□□ -1.89
CLIP1-207ENST00000536634 ACY3Q96HD9 319 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 YPEL4Q96NS1 127 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 LINC00467Q9BRT7 94 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 PBDC1Q9BVG4 233 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 RPRMQ9NS64 109 aa3.25□□□□□ -1.89
CLIP1-207ENST00000536634 IGKV1D-37A0A075B6S9 117 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 A0A1B0GW15 77 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 SCGNO76038 276 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 TCRBP04435 133 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 S100A7P31151 101 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 RPL29P47914 159 aaKnown RBP3.24□□□□□ -1.89
CLIP1-207ENST00000536634 TAS2R20P59543 309 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 RND3P61587 244 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 ZNF90Q03938 601 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 RAB31Q13636 194 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 PYDC2Q56P42 97 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 C22orf42Q6IC83 251 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 Q6ZTI0 123 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 TMEM256Q8N2U0 113 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 IL22RA2Q969J5 263 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 MGLLQ99685 303 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 C20orf144Q9BQM9 153 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 CST9LQ9H4G1 147 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 ZNF331Q9NQX6 463 aaPredicted RBP3.24□□□□□ -1.89
CLIP1-207ENST00000536634 UQCC1Q9NVA1 299 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 ANAPC10Q9UM13 185 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 LY96Q9Y6Y9 160 aa3.24□□□□□ -1.89
CLIP1-207ENST00000536634 TGIF2-C20orf24A0A0A6YYL0 155 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 SSNA1O43805 119 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 ADAP1O75689 374 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 CRYGDP07320 174 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 OR10J4P0C629 311 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 SLC25A4P12235 298 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 SDC2P34741 201 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 BTCP35070 178 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 HRH1P35367 487 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 AKR1C2P52895 323 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 NDUFA6P56556 154 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 HIST1H1AQ02539 215 aaPredicted RBP3.23□□□□□ -1.89
CLIP1-207ENST00000536634 DAZ2Q13117 558 aaKnown RBP3.23□□□□□ -1.89
CLIP1-207ENST00000536634 COX19Q49B96 90 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 SFXN4Q6P4A7 337 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 LYPD5Q6UWN5 251 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 ZNF493Q6ZR52 646 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 OR8I2Q8N0Y5 310 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 OR51S1Q8NGJ8 323 aa3.23□□□□□ -1.89
CLIP1-207ENST00000536634 CIRBP-AS1Q8TBR5 109 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms