RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 IGLV2-8P01709 118 aa9.65□□□□□ -0.86
UBE3B-206ENST00000536398 CRYGDP07320 174 aa9.65□□□□□ -0.86
UBE3B-206ENST00000536398 LINC00694P0DN24 101 aa9.65□□□□□ -0.86
UBE3B-206ENST00000536398 MED14OSP0DP75 135 aa9.65□□□□□ -0.86
UBE3B-206ENST00000536398 BTF3P20290 206 aaKnown RBP9.65□□□□□ -0.86
UBE3B-206ENST00000536398 CENPWQ5EE01 88 aa9.65□□□□□ -0.86
UBE3B-206ENST00000536398 OR10AG1Q8NH19 301 aa9.65□□□□□ -0.86
UBE3B-206ENST00000536398 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
UBE3B-206ENST00000536398 TRAV9-2A0A087WT02 112 aa9.64□□□□□ -0.87
UBE3B-206ENST00000536398 TEX46H3BTG2 121 aa9.64□□□□□ -0.87
UBE3B-206ENST00000536398 EVI2AP22794 236 aa9.64□□□□□ -0.87
UBE3B-206ENST00000536398 FUSP35637 526 aaKnown RBP eCLIP9.64□□□□□ -0.87
UBE3B-206ENST00000536398 OR10J3Q5JRS4 329 aa9.64□□□□□ -0.87
UBE3B-206ENST00000536398 GTSF1LQ9H1H1 148 aa9.64□□□□□ -0.87
UBE3B-206ENST00000536398 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
UBE3B-206ENST00000536398 HSPG2P98160 4391 aa9.64□□□□□ -0.87
UBE3B-206ENST00000536398 IGHV3-38A0A0C4DH36 116 aa9.63□□□□□ -0.87
UBE3B-206ENST00000536398 BCL2P10415 239 aa9.63□□□□□ -0.87
UBE3B-206ENST00000536398 NKX2-5P52952 324 aaPredicted RBP9.63□□□□□ -0.87
UBE3B-206ENST00000536398 SSTP61278 116 aa9.63□□□□□ -0.87
UBE3B-206ENST00000536398 MEF2BQ02080 365 aaPredicted RBP9.63□□□□□ -0.87
UBE3B-206ENST00000536398 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
UBE3B-206ENST00000536398 Q8N3U1 123 aa9.63□□□□□ -0.87
UBE3B-206ENST00000536398 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
UBE3B-206ENST00000536398 APOBP04114 4563 aaKnown RBP9.63□□□□□ -0.87
UBE3B-206ENST00000536398 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
UBE3B-206ENST00000536398 RHODO00212 210 aa9.62□□□□□ -0.87
UBE3B-206ENST00000536398 IGHV3-30P01768 117 aa9.62□□□□□ -0.87
UBE3B-206ENST00000536398 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
UBE3B-206ENST00000536398 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
UBE3B-206ENST00000536398 IGHV3-30-5P0DP03 117 aa9.62□□□□□ -0.87
UBE3B-206ENST00000536398 GZMBP10144 247 aa9.62□□□□□ -0.87
UBE3B-206ENST00000536398 LELP1Q5T871 98 aa9.62□□□□□ -0.87
UBE3B-206ENST00000536398 ALKAL2Q6UX46 152 aa9.62□□□□□ -0.87
UBE3B-206ENST00000536398 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
UBE3B-206ENST00000536398 TRBV20OR9-2A0A075B6H5 130 aa9.61□□□□□ -0.87
UBE3B-206ENST00000536398 SNAI2O43623 268 aa9.61□□□□□ -0.87
UBE3B-206ENST00000536398 IFNA1P01562 189 aa9.61□□□□□ -0.87
UBE3B-206ENST00000536398 CXCL1P09341 107 aa9.61□□□□□ -0.87
UBE3B-206ENST00000536398 LINC01556Q5JQF7 62 aa9.61□□□□□ -0.87
UBE3B-206ENST00000536398 VAX2Q9UIW0 290 aa9.61□□□□□ -0.87
UBE3B-206ENST00000536398 C19orf71A6NCJ1 209 aa9.6□□□□□ -0.87
UBE3B-206ENST00000536398 RBFOX3A6NFN3 312 aa9.6□□□□□ -0.87
UBE3B-206ENST00000536398 PDE6DO43924 150 aa9.6□□□□□ -0.87
UBE3B-206ENST00000536398 GNG4P50150 75 aa9.6□□□□□ -0.87
UBE3B-206ENST00000536398 KRTAP17-1Q9BYP8 105 aa9.6□□□□□ -0.87
UBE3B-206ENST00000536398 PCLOQ9Y6V0 5065 aa9.6□□□□□ -0.87
UBE3B-206ENST00000536398 OR5AL1P0C617 328 aa9.59□□□□□ -0.87
UBE3B-206ENST00000536398 NFE4Q86UQ8 179 aa9.59□□□□□ -0.87
UBE3B-206ENST00000536398 OR2D3Q8NGH3 330 aa9.59□□□□□ -0.87
UBE3B-206ENST00000536398 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
UBE3B-206ENST00000536398 K7EP13 123 aa9.58□□□□□ -0.88
UBE3B-206ENST00000536398 SPANXN1Q5VSR9 72 aa9.58□□□□□ -0.88
UBE3B-206ENST00000536398 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
UBE3B-206ENST00000536398 DAZAP1Q96EP5 407 aaKnown RBP9.58□□□□□ -0.88
UBE3B-206ENST00000536398 A0A087WTM6 91 aa9.57□□□□□ -0.88
UBE3B-206ENST00000536398 IGLC6P0CF74 106 aa9.57□□□□□ -0.88
UBE3B-206ENST00000536398 TPPP3Q9BW30 176 aa9.57□□□□□ -0.88
UBE3B-206ENST00000536398 Q9HAA7 133 aa9.57□□□□□ -0.88
UBE3B-206ENST00000536398 ABCA13Q86UQ4 5058 aa9.57□□□□□ -0.88
UBE3B-206ENST00000536398 ERVFC1-1P60608 527 aa9.56□□□□□ -0.88
UBE3B-206ENST00000536398 RAB4BP61018 213 aa9.56□□□□□ -0.88
UBE3B-206ENST00000536398 UBE2D3P61077 147 aa9.56□□□□□ -0.88
UBE3B-206ENST00000536398 UBE2D2P62837 147 aa9.56□□□□□ -0.88
UBE3B-206ENST00000536398 DAZ4Q86SG3 579 aaKnown RBP9.56□□□□□ -0.88
UBE3B-206ENST00000536398 OCC1Q8TAD7 63 aa9.56□□□□□ -0.88
UBE3B-206ENST00000536398 SMIM12Q96EX1 92 aa9.56□□□□□ -0.88
UBE3B-206ENST00000536398 DAZ3Q9NR90 486 aaKnown RBP9.56□□□□□ -0.88
UBE3B-206ENST00000536398 KIF25-AS1Q9Y6Z4 181 aa9.56□□□□□ -0.88
UBE3B-206ENST00000536398 TRBV10-1A0A0K0K1A3 114 aa9.55□□□□□ -0.88
UBE3B-206ENST00000536398 K7EN84 100 aa9.55□□□□□ -0.88
UBE3B-206ENST00000536398 P01737 135 aa9.55□□□□□ -0.88
UBE3B-206ENST00000536398 TAGLN2P37802 199 aaKnown RBP9.55□□□□□ -0.88
UBE3B-206ENST00000536398 BLOC1S1P78537 153 aa9.55□□□□□ -0.88
UBE3B-206ENST00000536398 ZNF56Q15929 161 aa9.55□□□□□ -0.88
UBE3B-206ENST00000536398 FER1L6-AS1Q8NA97 138 aa9.55□□□□□ -0.88
UBE3B-206ENST00000536398 NEXN-AS1Q8NBZ9 246 aa9.55□□□□□ -0.88
UBE3B-206ENST00000536398 NUDT10Q8NFP7 164 aa9.55□□□□□ -0.88
UBE3B-206ENST00000536398 LYPD6BQ8NI32 183 aa9.55□□□□□ -0.88
UBE3B-206ENST00000536398 NUDT11Q96G61 164 aa9.55□□□□□ -0.88
UBE3B-206ENST00000536398 TRBV7-3A0A075B6L6 115 aa9.54□□□□□ -0.88
UBE3B-206ENST00000536398 F5H697 171 aa9.54□□□□□ -0.88
UBE3B-206ENST00000536398 RPS20P60866 119 aaKnown RBP9.54□□□□□ -0.88
UBE3B-206ENST00000536398 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
UBE3B-206ENST00000536398 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
UBE3B-206ENST00000536398 DNAJC30Q96LL9 226 aa9.54□□□□□ -0.88
UBE3B-206ENST00000536398 KRTAP4-5Q9BYR2 181 aa9.54□□□□□ -0.88
UBE3B-206ENST00000536398 RNASE7Q9H1E1 156 aaKnown RBP9.54□□□□□ -0.88
UBE3B-206ENST00000536398 A0A087WWC5 75 aa9.53□□□□□ -0.88
UBE3B-206ENST00000536398 LRCOL1A6NCL2 159 aa9.53□□□□□ -0.88
UBE3B-206ENST00000536398 EREGO14944 169 aa9.53□□□□□ -0.88
UBE3B-206ENST00000536398 LYZL1Q6UWQ5 148 aa9.53□□□□□ -0.88
UBE3B-206ENST00000536398 OR10G8Q8NGN5 311 aa9.53□□□□□ -0.88
UBE3B-206ENST00000536398 PGPEP1Q9NXJ5 209 aa9.53□□□□□ -0.88
UBE3B-206ENST00000536398 PSCAO43653 123 aa9.52□□□□□ -0.89
UBE3B-206ENST00000536398 CDK2AP2O75956 126 aa9.52□□□□□ -0.89
UBE3B-206ENST00000536398 NIT1Q86X76 327 aa9.52□□□□□ -0.89
UBE3B-206ENST00000536398 AP1S3Q96PC3 154 aa9.52□□□□□ -0.89
UBE3B-206ENST00000536398 MGPP08493 103 aa9.51□□□□□ -0.89
UBE3B-206ENST00000536398 SMIM17P0DL12 118 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms