RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 IGHV4-39P01824 125 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 COX6B1P14854 86 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 POLR2KP53803 58 aaKnown RBP4.28□□□□□ -1.72
VPS33A-203ENST00000536212 LY6DQ14210 128 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 RRN3P1Q2M238 152 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 ZFAND6Q6FIF0 208 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 C2orf66Q6UXQ4 117 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 FOXI2Q6ZQN5 318 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 TMEM219Q86XT9 240 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 C14orf178Q8N769 122 aaPredicted RBP4.28□□□□□ -1.72
VPS33A-203ENST00000536212 RPL39LQ96EH5 51 aaKnown RBP4.28□□□□□ -1.72
VPS33A-203ENST00000536212 ODF3Q96PU9 254 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 SPANXB1Q9NS25 103 aaPredicted RBP4.28□□□□□ -1.72
VPS33A-203ENST00000536212 NHP2Q9NX24 153 aaKnown RBP4.28□□□□□ -1.72
VPS33A-203ENST00000536212 VPREB3Q9UKI3 123 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 CACNA1HO95180 2353 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 PKDREJQ9NTG1 2253 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 ARHGAP32A7KAX9 2087 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 IGHV4-61A0A0C4DH41 118 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 TRBV6-5A0A0K0K1A5 114 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 SMIM9A6NGZ8 99 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 IGIPA6NJ69 53 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 C19orf84I3L1E1 186 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 VCYO14598 125 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 GNRH2O43555 120 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 CRYGDP07320 174 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 LGALS1P09382 135 aaKnown RBP4.27□□□□□ -1.73
VPS33A-203ENST00000536212 SRD5A1P18405 259 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 S100A4P26447 101 aaKnown RBP4.27□□□□□ -1.73
VPS33A-203ENST00000536212 RNASE4P34096 147 aaKnown RBP4.27□□□□□ -1.73
VPS33A-203ENST00000536212 PMVKQ15126 192 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 PAPPA-AS1Q5QFB9 102 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 C10orf105Q8TEF2 133 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 TMEM141Q96I45 108 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 DNAJC30Q96LL9 226 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 ANAPC13Q9BS18 74 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 RHPN1-AS1Q9BWJ2 59 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 GTSF1LQ9H1H1 148 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 KLK15Q9H2R5 256 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 PRO0461Q9UI25 63 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
VPS33A-203ENST00000536212 PHLDA3Q9Y5J5 127 aa4.27□□□□□ -1.73
VPS33A-203ENST00000536212 ABCA1O95477 2261 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 IGLV4-69A0A075B6H9 119 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 IGHV3OR16-10A0A075B7F0 116 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 GAGE12JA6NER3 117 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 LGALS9O00182 355 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 GAGE7O76087 117 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 TSHBP01222 138 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 MGPP08493 103 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 GAGE12FP0CL80 117 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 GAGE12GP0CL81 117 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 GAGE12IP0CL82 117 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 UBE2D1P51668 147 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 DEFB1P60022 68 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 GAGE4Q13068 117 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 MORN3Q6PF18 240 aaPredicted RBP4.26□□□□□ -1.73
VPS33A-203ENST00000536212 RNF183Q96D59 192 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 C9orf85Q96MD7 179 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 HIST1H4GQ99525 98 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 TIMM17AQ99595 171 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 PRADC1Q9BSG0 188 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 PRORYQ9H606 182 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 DAZ1Q9NQZ3 744 aaKnown RBP4.26□□□□□ -1.73
VPS33A-203ENST00000536212 LINC00527Q9UJ94 153 aa4.26□□□□□ -1.73
VPS33A-203ENST00000536212 TEX48A0A1B0GUV7 120 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 TMEM89A2RUT3 159 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 F6UB75 175 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 DUSP14O95147 198 aaKnown RBP4.25□□□□□ -1.73
VPS33A-203ENST00000536212 APC2O95996 2303 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 ROS1P08922 2347 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 WFDC2Q14508 124 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 RHOHQ15669 191 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 SUMO4Q6EEV6 95 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 BRD3OSQ6XYD6 125 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 ZFP2Q6ZN57 461 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 DCANP1Q8TF63 244 aa4.25□□□□□ -1.73
VPS33A-203ENST00000536212 POLEQ07864 2286 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 VPS13AQ96RL7 3174 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 IGHV3-16A0A0C4DH30 117 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 TRBV27A0A0K0K1C4 114 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 A0A1B0GX51 115 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 C11orf86A6NJI1 115 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 ZNF815PA8K554 130 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 H3BUX3 64 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 IGHV3-11P01762 117 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 CD7P09564 240 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 IGHV4-38-2P0DP08 117 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 SEC61GP60059 68 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 HERVK_113P61574 105 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
VPS33A-203ENST00000536212 BLCAPP62952 87 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 LY6EQ16553 131 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 NSUN5P1Q3KNT7 163 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 ZNF876PQ49A33 203 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 FAM159AQ6UWV7 190 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 NFE4Q86UQ8 179 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 PLEKHB2Q96CS7 222 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 ZNF256Q9Y2P7 627 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms