RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 M0R2N4 97 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 RHODO00212 210 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 SRIP30626 198 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 RHOHQ15669 191 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 SPANXN1Q5VSR9 72 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 LYPD5Q6UWN5 251 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 LYZL1Q6UWQ5 148 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 Q6ZR54 194 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 NEGR1Q7Z3B1 354 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 C14orf178Q8N769 122 aaPredicted RBP7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 GTSF1Q8WW33 167 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 UPK3BQ9BT76 320 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 TPPP3Q9BW30 176 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 SMDT1Q9H4I9 107 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 MSRB1Q9NZV6 116 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 DNAH6Q9C0G6 4158 aa7.78□□□□□ -1.16
TNFRSF1A-208ENST00000536194 XKRY2A2RUG3 117 aa7.77□□□□□ -1.17
TNFRSF1A-208ENST00000536194 LINC00694P0DN24 101 aa7.77□□□□□ -1.17
TNFRSF1A-208ENST00000536194 CTRLP40313 264 aa7.77□□□□□ -1.17
TNFRSF1A-208ENST00000536194 RPL23P62829 140 aaKnown RBP7.77□□□□□ -1.17
TNFRSF1A-208ENST00000536194 CLLU1Q5K131 121 aa7.77□□□□□ -1.17
TNFRSF1A-208ENST00000536194 PRADC1Q9BSG0 188 aa7.77□□□□□ -1.17
TNFRSF1A-208ENST00000536194 KIF25-AS1Q9Y6Z4 181 aa7.77□□□□□ -1.17
TNFRSF1A-208ENST00000536194 GATCO43716 136 aaKnown RBP7.76□□□□□ -1.17
TNFRSF1A-208ENST00000536194 LINC00315P59091 139 aa7.76□□□□□ -1.17
TNFRSF1A-208ENST00000536194 ERVFC1-1P60608 527 aa7.76□□□□□ -1.17
TNFRSF1A-208ENST00000536194 RAB14P61106 215 aa7.76□□□□□ -1.17
TNFRSF1A-208ENST00000536194 TMEM241Q24JQ0 296 aa7.76□□□□□ -1.17
TNFRSF1A-208ENST00000536194 FAM74A3Q4VXF1 159 aa7.76□□□□□ -1.17
TNFRSF1A-208ENST00000536194 ISOC2Q96AB3 205 aa7.76□□□□□ -1.17
TNFRSF1A-208ENST00000536194 CNFNQ9BYD5 112 aa7.76□□□□□ -1.17
TNFRSF1A-208ENST00000536194 Q9H8V8 135 aa7.76□□□□□ -1.17
TNFRSF1A-208ENST00000536194 A0A1W2PPQ1 181 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 GAGE12JA6NER3 117 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 F2Z2F3 143 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 CACNG7P62955 275 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 GAGE1Q13065 139 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 GAGE4Q13068 117 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 GAGE5Q13069 117 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 GAGE13Q4V321 117 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 SOHLH1Q5JUK2 328 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 KRTAP1-5Q9BYS1 174 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 OSTCQ9NRP0 149 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 NAT8Q9UHE5 227 aa7.75□□□□□ -1.17
TNFRSF1A-208ENST00000536194 NBDYA0A0U1RRE5 68 aa7.74□□□□□ -1.17
TNFRSF1A-208ENST00000536194 NTF3P20783 257 aa7.74□□□□□ -1.17
TNFRSF1A-208ENST00000536194 RAB4BP61018 213 aa7.74□□□□□ -1.17
TNFRSF1A-208ENST00000536194 ADIRFQ15847 76 aa7.74□□□□□ -1.17
TNFRSF1A-208ENST00000536194 ZNF56Q15929 161 aa7.74□□□□□ -1.17
TNFRSF1A-208ENST00000536194 CT83Q5H943 113 aa7.74□□□□□ -1.17
TNFRSF1A-208ENST00000536194 AP1S3Q96PC3 154 aa7.74□□□□□ -1.17
TNFRSF1A-208ENST00000536194 V9GYV3 84 aa7.74□□□□□ -1.17
TNFRSF1A-208ENST00000536194 A8MWL6 223 aa7.73□□□□□ -1.17
TNFRSF1A-208ENST00000536194 EVI2AP22794 236 aa7.73□□□□□ -1.17
TNFRSF1A-208ENST00000536194 FOXA3P55318 350 aaPredicted RBP7.73□□□□□ -1.17
TNFRSF1A-208ENST00000536194 WDR73Q6P4I2 378 aa7.73□□□□□ -1.17
TNFRSF1A-208ENST00000536194 SH2D6Q7Z4S9 175 aa7.73□□□□□ -1.17
TNFRSF1A-208ENST00000536194 WFDC10BQ8IUB3 73 aa7.73□□□□□ -1.17
TNFRSF1A-208ENST00000536194 ATP6V0E2Q8NHE4 81 aa7.73□□□□□ -1.17
TNFRSF1A-208ENST00000536194 RTL8CO15255 209 aa7.72□□□□□ -1.17
TNFRSF1A-208ENST00000536194 SIVA1O15304 175 aa7.72□□□□□ -1.17
TNFRSF1A-208ENST00000536194 TIRAPP58753 221 aa7.72□□□□□ -1.17
TNFRSF1A-208ENST00000536194 TSKUQ8WUA8 353 aa7.72□□□□□ -1.17
TNFRSF1A-208ENST00000536194 PGLYRP4Q96LB8 373 aa7.72□□□□□ -1.17
TNFRSF1A-208ENST00000536194 TRBV10-1A0A0K0K1A3 114 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 HIGD1CA8MV81 97 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 MGPP08493 103 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 TRGC1P0CF51 173 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 SMIM17P0DL12 118 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 TWIST1Q15672 202 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 C15orf54Q8N8G6 183 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 NEXN-AS1Q8NBZ9 246 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 OR10G8Q8NGN5 311 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 GFRA4Q9GZZ7 299 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 GTSF1LQ9H1H1 148 aa7.71□□□□□ -1.18
TNFRSF1A-208ENST00000536194 TRBV7-3A0A075B6L6 115 aa7.7□□□□□ -1.18
TNFRSF1A-208ENST00000536194 F5H697 171 aa7.7□□□□□ -1.18
TNFRSF1A-208ENST00000536194 M0QY20 66 aa7.7□□□□□ -1.18
TNFRSF1A-208ENST00000536194 SUMO4Q6EEV6 95 aa7.7□□□□□ -1.18
TNFRSF1A-208ENST00000536194 FAM231BA6NCW3 169 aa7.69□□□□□ -1.18
TNFRSF1A-208ENST00000536194 DNAH10OSP0CZ25 163 aa7.69□□□□□ -1.18
TNFRSF1A-208ENST00000536194 ADCYAP1P18509 176 aa7.69□□□□□ -1.18
TNFRSF1A-208ENST00000536194 UBE2D3P61077 147 aa7.69□□□□□ -1.18
TNFRSF1A-208ENST00000536194 UBE2D2P62837 147 aa7.69□□□□□ -1.18
TNFRSF1A-208ENST00000536194 RPL36AP83881 106 aaKnown RBP7.69□□□□□ -1.18
TNFRSF1A-208ENST00000536194 LELP1Q5T871 98 aa7.69□□□□□ -1.18
TNFRSF1A-208ENST00000536194 NUP35Q8NFH5 326 aa7.69□□□□□ -1.18
TNFRSF1A-208ENST00000536194 RPL36ALQ969Q0 106 aaKnown RBP7.69□□□□□ -1.18
TNFRSF1A-208ENST00000536194 DPH3P1Q9H4G8 78 aa7.69□□□□□ -1.18
TNFRSF1A-208ENST00000536194 A0A1B0GUT8 65 aa7.68□□□□□ -1.18
TNFRSF1A-208ENST00000536194 SMIM27A0A1W2PRY6 76 aa7.68□□□□□ -1.18
TNFRSF1A-208ENST00000536194 TTC32Q5I0X7 151 aa7.68□□□□□ -1.18
TNFRSF1A-208ENST00000536194 C1orf134Q5TEV5 83 aa7.68□□□□□ -1.18
TNFRSF1A-208ENST00000536194 Q8N3U1 123 aa7.68□□□□□ -1.18
TNFRSF1A-208ENST00000536194 DNAH2Q9P225 4427 aa7.68□□□□□ -1.18
TNFRSF1A-208ENST00000536194 DNAH10Q8IVF4 4471 aa7.68□□□□□ -1.18
TNFRSF1A-208ENST00000536194 TRAV26-2A0A0B4J265 109 aa7.67□□□□□ -1.18
TNFRSF1A-208ENST00000536194 IGHV3-38A0A0C4DH36 116 aa7.67□□□□□ -1.18
TNFRSF1A-208ENST00000536194 OR10J3Q5JRS4 329 aa7.67□□□□□ -1.18
TNFRSF1A-208ENST00000536194 UQCC3Q6UW78 93 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms