RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 GTSF1LQ9H1H1 148 aa9.46□□□□□ -0.9
SF3B2-215ENST00000534307 A0A1B0GV50 99 aa9.45□□□□□ -0.9
SF3B2-215ENST00000534307 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
SF3B2-215ENST00000534307 ATP6V0E2Q8NHE4 81 aa9.45□□□□□ -0.9
SF3B2-215ENST00000534307 FLG2Q5D862 2391 aaPredicted RBP9.45□□□□□ -0.9
SF3B2-215ENST00000534307 TRAV8-6A0A0B4J262 113 aa9.44□□□□□ -0.9
SF3B2-215ENST00000534307 IBA57-AS1B1ANH7 110 aa9.44□□□□□ -0.9
SF3B2-215ENST00000534307 RHODO00212 210 aa9.44□□□□□ -0.9
SF3B2-215ENST00000534307 S100A9P06702 114 aaKnown RBP9.44□□□□□ -0.9
SF3B2-215ENST00000534307 SULT1A2P50226 295 aa9.44□□□□□ -0.9
SF3B2-215ENST00000534307 C14orf178Q8N769 122 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-215ENST00000534307 SYT8Q8NBV8 401 aa9.44□□□□□ -0.9
SF3B2-215ENST00000534307 PGPEP1Q9NXJ5 209 aa9.44□□□□□ -0.9
SF3B2-215ENST00000534307 BOLA1Q9Y3E2 137 aa9.44□□□□□ -0.9
SF3B2-215ENST00000534307 TMSB15BA0A087X1C1 80 aa9.43□□□□□ -0.9
SF3B2-215ENST00000534307 TRAV1-1A0A0B4J248 108 aa9.43□□□□□ -0.9
SF3B2-215ENST00000534307 GAGE12JA6NER3 117 aa9.43□□□□□ -0.9
SF3B2-215ENST00000534307 FUSP35637 526 aaKnown RBP eCLIP9.43□□□□□ -0.9
SF3B2-215ENST00000534307 GAGE1Q13065 139 aa9.43□□□□□ -0.9
SF3B2-215ENST00000534307 GAGE4Q13068 117 aa9.43□□□□□ -0.9
SF3B2-215ENST00000534307 GAGE5Q13069 117 aa9.43□□□□□ -0.9
SF3B2-215ENST00000534307 GAGE13Q4V321 117 aa9.43□□□□□ -0.9
SF3B2-215ENST00000534307 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
SF3B2-215ENST00000534307 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
SF3B2-215ENST00000534307 SFRP2Q96HF1 295 aa9.43□□□□□ -0.9
SF3B2-215ENST00000534307 EREGO14944 169 aa9.42□□□□□ -0.9
SF3B2-215ENST00000534307 PHLDA3Q9Y5J5 127 aa9.42□□□□□ -0.9
SF3B2-215ENST00000534307 A0A087WWL8 130 aa9.41□□□□□ -0.9
SF3B2-215ENST00000534307 LRCOL1A6NCL2 159 aa9.41□□□□□ -0.9
SF3B2-215ENST00000534307 M0R381 172 aa9.41□□□□□ -0.9
SF3B2-215ENST00000534307 CXCL1P09341 107 aa9.41□□□□□ -0.9
SF3B2-215ENST00000534307 RPL19P84098 196 aaKnown RBP9.41□□□□□ -0.9
SF3B2-215ENST00000534307 BAGE2Q86Y30 109 aa9.41□□□□□ -0.9
SF3B2-215ENST00000534307 ZFP82Q8N141 532 aa9.41□□□□□ -0.9
SF3B2-215ENST00000534307 Q8N3U1 123 aa9.41□□□□□ -0.9
SF3B2-215ENST00000534307 C11orf52Q96A22 123 aa9.41□□□□□ -0.9
SF3B2-215ENST00000534307 IGHV3-30P01768 117 aa9.4□□□□□ -0.9
SF3B2-215ENST00000534307 IGHV3-33P01772 117 aa9.4□□□□□ -0.9
SF3B2-215ENST00000534307 IGHV3-30-3P0DP02 117 aa9.4□□□□□ -0.9
SF3B2-215ENST00000534307 IGHV3-30-5P0DP03 117 aa9.4□□□□□ -0.9
SF3B2-215ENST00000534307 RPL35P42766 123 aaKnown RBP9.4□□□□□ -0.9
SF3B2-215ENST00000534307 NKX2-5P52952 324 aaPredicted RBP9.4□□□□□ -0.9
SF3B2-215ENST00000534307 LAGE3Q14657 143 aa9.4□□□□□ -0.9
SF3B2-215ENST00000534307 FAM74A4Q5TZK3 123 aa9.4□□□□□ -0.9
SF3B2-215ENST00000534307 MANBALQ9NQG1 85 aa9.4□□□□□ -0.9
SF3B2-215ENST00000534307 SNAI2O43623 268 aa9.39□□□□□ -0.91
SF3B2-215ENST00000534307 DERL1Q9BUN8 251 aa9.39□□□□□ -0.91
SF3B2-215ENST00000534307 SSBP4Q9BWG4 385 aaPredicted RBP9.39□□□□□ -0.91
SF3B2-215ENST00000534307 GNG13Q9P2W3 67 aa9.39□□□□□ -0.91
SF3B2-215ENST00000534307 A0A087WWC5 75 aa9.38□□□□□ -0.91
SF3B2-215ENST00000534307 TRBV10-1A0A0K0K1A3 114 aa9.38□□□□□ -0.91
SF3B2-215ENST00000534307 TAGLN2P37802 199 aaKnown RBP9.38□□□□□ -0.91
SF3B2-215ENST00000534307 BLOC1S1P78537 153 aa9.38□□□□□ -0.91
SF3B2-215ENST00000534307 OR10AG1Q8NH19 301 aa9.38□□□□□ -0.91
SF3B2-215ENST00000534307 Q9HAA7 133 aa9.38□□□□□ -0.91
SF3B2-215ENST00000534307 IFNA1P01562 189 aa9.37□□□□□ -0.91
SF3B2-215ENST00000534307 IGLV2-8P01709 118 aa9.37□□□□□ -0.91
SF3B2-215ENST00000534307 OR5AL1P0C617 328 aa9.37□□□□□ -0.91
SF3B2-215ENST00000534307 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
SF3B2-215ENST00000534307 PRR27Q6MZM9 219 aa9.37□□□□□ -0.91
SF3B2-215ENST00000534307 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
SF3B2-215ENST00000534307 XGP55808 180 aa9.36□□□□□ -0.91
SF3B2-215ENST00000534307 OR10G8Q8NGN5 311 aa9.36□□□□□ -0.91
SF3B2-215ENST00000534307 HMCN2Q8NDA2 5059 aa9.35□□□□□ -0.91
SF3B2-215ENST00000534307 PSCAO43653 123 aa9.35□□□□□ -0.91
SF3B2-215ENST00000534307 RAB4BP61018 213 aa9.35□□□□□ -0.91
SF3B2-215ENST00000534307 UBE2D3P61077 147 aa9.35□□□□□ -0.91
SF3B2-215ENST00000534307 UBE2D2P62837 147 aa9.35□□□□□ -0.91
SF3B2-215ENST00000534307 CENPWQ5EE01 88 aa9.35□□□□□ -0.91
SF3B2-215ENST00000534307 ALKAL2Q6UX46 152 aa9.35□□□□□ -0.91
SF3B2-215ENST00000534307 DAZ4Q86SG3 579 aaKnown RBP9.35□□□□□ -0.91
SF3B2-215ENST00000534307 NIT1Q86X76 327 aa9.35□□□□□ -0.91
SF3B2-215ENST00000534307 DAZ3Q9NR90 486 aaKnown RBP9.35□□□□□ -0.91
SF3B2-215ENST00000534307 TRBV20OR9-2A0A075B6H5 130 aa9.34□□□□□ -0.91
SF3B2-215ENST00000534307 TRBV7-3A0A075B6L6 115 aa9.34□□□□□ -0.91
SF3B2-215ENST00000534307 C19orf71A6NCJ1 209 aa9.34□□□□□ -0.91
SF3B2-215ENST00000534307 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.91
SF3B2-215ENST00000534307 Q8N814 137 aa9.34□□□□□ -0.91
SF3B2-215ENST00000534307 LYPD6BQ8NI32 183 aa9.34□□□□□ -0.91
SF3B2-215ENST00000534307 NTN5Q8WTR8 489 aaPredicted RBP9.34□□□□□ -0.91
SF3B2-215ENST00000534307 KIF25-AS1Q9Y6Z4 181 aa9.34□□□□□ -0.91
SF3B2-215ENST00000534307 MUC21A0A0G2JKD1 596 aa9.33□□□□□ -0.92
SF3B2-215ENST00000534307 MUC21A0A140T8X8 626 aa9.33□□□□□ -0.92
SF3B2-215ENST00000534307 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
SF3B2-215ENST00000534307 IGLC6P0CF74 106 aa9.33□□□□□ -0.92
SF3B2-215ENST00000534307 INAFM2P0DMQ5 153 aa9.33□□□□□ -0.92
SF3B2-215ENST00000534307 BCL2P10415 239 aa9.33□□□□□ -0.92
SF3B2-215ENST00000534307 GCSHP23434 173 aa9.33□□□□□ -0.92
SF3B2-215ENST00000534307 RPL36AP83881 106 aaKnown RBP9.33□□□□□ -0.92
SF3B2-215ENST00000534307 WFDC2Q14508 124 aa9.33□□□□□ -0.92
SF3B2-215ENST00000534307 RPL36ALQ969Q0 106 aaKnown RBP9.33□□□□□ -0.92
SF3B2-215ENST00000534307 SMIM12Q96EX1 92 aa9.33□□□□□ -0.92
SF3B2-215ENST00000534307 TRAV8-3A0A0A6YYJ7 113 aa9.32□□□□□ -0.92
SF3B2-215ENST00000534307 RAB19A4D1S5 217 aa9.32□□□□□ -0.92
SF3B2-215ENST00000534307 PDE6DO43924 150 aa9.32□□□□□ -0.92
SF3B2-215ENST00000534307 ZNF56Q15929 161 aa9.32□□□□□ -0.92
SF3B2-215ENST00000534307 SPANXN1Q5VSR9 72 aa9.32□□□□□ -0.92
SF3B2-215ENST00000534307 NEXN-AS1Q8NBZ9 246 aa9.32□□□□□ -0.92
SF3B2-215ENST00000534307 TM2D2Q9BX73 214 aa9.32□□□□□ -0.92
SF3B2-215ENST00000534307 GZMBP10144 247 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms