RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 WFDC10BQ8IUB3 73 aa10.52□□□□□ -0.73
UBXN1-217ENST00000534176 SSBP4Q9BWG4 385 aaPredicted RBP10.52□□□□□ -0.73
UBXN1-217ENST00000534176 TMSB15BA0A087X1C1 80 aa10.51□□□□□ -0.73
UBXN1-217ENST00000534176 C16orf90A8MZG2 172 aa10.51□□□□□ -0.73
UBXN1-217ENST00000534176 SNAI2O43623 268 aa10.51□□□□□ -0.73
UBXN1-217ENST00000534176 FAM74A4Q5TZK3 123 aa10.51□□□□□ -0.73
UBXN1-217ENST00000534176 PRR27Q6MZM9 219 aa10.51□□□□□ -0.73
UBXN1-217ENST00000534176 C9orf62Q8N4C0 152 aa10.51□□□□□ -0.73
UBXN1-217ENST00000534176 RAB4BP61018 213 aa10.5□□□□□ -0.73
UBXN1-217ENST00000534176 RPL36AP83881 106 aaKnown RBP10.5□□□□□ -0.73
UBXN1-217ENST00000534176 LAGE3Q14657 143 aa10.5□□□□□ -0.73
UBXN1-217ENST00000534176 CENPWQ5EE01 88 aa10.5□□□□□ -0.73
UBXN1-217ENST00000534176 SPANXN1Q5VSR9 72 aa10.5□□□□□ -0.73
UBXN1-217ENST00000534176 CDPF1Q6NVV7 123 aa10.5□□□□□ -0.73
UBXN1-217ENST00000534176 Q6ZRN7 208 aaPredicted RBP10.5□□□□□ -0.73
UBXN1-217ENST00000534176 RPL36ALQ969Q0 106 aaKnown RBP10.5□□□□□ -0.73
UBXN1-217ENST00000534176 MED9Q9NWA0 146 aa10.5□□□□□ -0.73
UBXN1-217ENST00000534176 SMIM17P0DL12 118 aa10.49□□□□□ -0.73
UBXN1-217ENST00000534176 LINC00694P0DN24 101 aa10.49□□□□□ -0.73
UBXN1-217ENST00000534176 TOR2AQ5JU69 321 aa10.49□□□□□ -0.73
UBXN1-217ENST00000534176 ZNF575Q86XF7 245 aa10.49□□□□□ -0.73
UBXN1-217ENST00000534176 PGPEP1Q9NXJ5 209 aa10.49□□□□□ -0.73
UBXN1-217ENST00000534176 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
UBXN1-217ENST00000534176 F2Z2F3 143 aa10.48□□□□□ -0.73
UBXN1-217ENST00000534176 NDUFS6O75380 124 aaKnown RBP10.48□□□□□ -0.73
UBXN1-217ENST00000534176 AP1S3Q96PC3 154 aa10.48□□□□□ -0.73
UBXN1-217ENST00000534176 PKHD1P08F94 4074 aa10.48□□□□□ -0.73
UBXN1-217ENST00000534176 hCG_2014768A0A024R1R8 64 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 TRBV7-3A0A075B6L6 115 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 TMEM250H0YL14 139 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 CDK2AP2O75956 126 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 P01737 135 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 CACNG7P62955 275 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 GAGE1Q13065 139 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 GAGE4Q13068 117 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 GAGE5Q13069 117 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 GAGE13Q4V321 117 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 SPATA12Q7Z6I5 190 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 CHCHD7Q9BUK0 85 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 DERL1Q9BUN8 251 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 SAMD10Q9BYL1 202 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 JPT2Q9H910 190 aa10.47□□□□□ -0.73
UBXN1-217ENST00000534176 PKD1P98161 4303 aa10.46□□□□□ -0.73
UBXN1-217ENST00000534176 A0A087WWL8 130 aa10.46□□□□□ -0.73
UBXN1-217ENST00000534176 PKIAP61925 76 aa10.46□□□□□ -0.73
UBXN1-217ENST00000534176 TMEM97Q5BJF2 176 aa10.46□□□□□ -0.73
UBXN1-217ENST00000534176 KCNIP4Q6PIL6 250 aa10.46□□□□□ -0.73
UBXN1-217ENST00000534176 Q6ZSN1 163 aa10.46□□□□□ -0.73
UBXN1-217ENST00000534176 OR10G8Q8NGN5 311 aa10.46□□□□□ -0.73
UBXN1-217ENST00000534176 TM2D2Q9BX73 214 aa10.46□□□□□ -0.73
UBXN1-217ENST00000534176 URGCP-MRPS24S4R325 110 aa10.46□□□□□ -0.73
UBXN1-217ENST00000534176 TRAV8-3A0A0A6YYJ7 113 aa10.45□□□□□ -0.74
UBXN1-217ENST00000534176 C19orf71A6NCJ1 209 aa10.45□□□□□ -0.74
UBXN1-217ENST00000534176 PSCAO43653 123 aa10.45□□□□□ -0.74
UBXN1-217ENST00000534176 RPL19P84098 196 aaKnown RBP10.45□□□□□ -0.74
UBXN1-217ENST00000534176 ZNF56Q15929 161 aa10.45□□□□□ -0.74
UBXN1-217ENST00000534176 C14orf178Q8N769 122 aaPredicted RBP10.45□□□□□ -0.74
UBXN1-217ENST00000534176 FER1L6-AS1Q8NA97 138 aa10.45□□□□□ -0.74
UBXN1-217ENST00000534176 OR2D3Q8NGH3 330 aa10.45□□□□□ -0.74
UBXN1-217ENST00000534176 OR10AG1Q8NH19 301 aa10.45□□□□□ -0.74
UBXN1-217ENST00000534176 LYPD6BQ8NI32 183 aa10.45□□□□□ -0.74
UBXN1-217ENST00000534176 COX11Q9Y6N1 276 aa10.45□□□□□ -0.74
UBXN1-217ENST00000534176 H7C1H1 209 aa10.44□□□□□ -0.74
UBXN1-217ENST00000534176 IGLV2-8P01709 118 aa10.44□□□□□ -0.74
UBXN1-217ENST00000534176 ELOBQ15370 118 aa10.44□□□□□ -0.74
UBXN1-217ENST00000534176 WDR73Q6P4I2 378 aa10.44□□□□□ -0.74
UBXN1-217ENST00000534176 RBFOX3A6NFN3 312 aa10.43□□□□□ -0.74
UBXN1-217ENST00000534176 TRGC1P0CF51 173 aa10.43□□□□□ -0.74
UBXN1-217ENST00000534176 IGLC6P0CF74 106 aa10.43□□□□□ -0.74
UBXN1-217ENST00000534176 ALKAL2Q6UX46 152 aa10.43□□□□□ -0.74
UBXN1-217ENST00000534176 A0A087WTM6 91 aa10.42□□□□□ -0.74
UBXN1-217ENST00000534176 RAB19A4D1S5 217 aa10.42□□□□□ -0.74
UBXN1-217ENST00000534176 UBE2D3P61077 147 aa10.42□□□□□ -0.74
UBXN1-217ENST00000534176 UBE2D2P62837 147 aa10.42□□□□□ -0.74
UBXN1-217ENST00000534176 DAZ4Q86SG3 579 aaKnown RBP10.42□□□□□ -0.74
UBXN1-217ENST00000534176 RMI2Q96E14 147 aa10.42□□□□□ -0.74
UBXN1-217ENST00000534176 DAZ3Q9NR90 486 aaKnown RBP10.42□□□□□ -0.74
UBXN1-217ENST00000534176 F5H697 171 aa10.41□□□□□ -0.74
UBXN1-217ENST00000534176 NTN5Q8WTR8 489 aaPredicted RBP10.41□□□□□ -0.74
UBXN1-217ENST00000534176 DNAJC30Q96LL9 226 aa10.41□□□□□ -0.74
UBXN1-217ENST00000534176 DNAH11Q96DT5 4516 aa10.41□□□□□ -0.74
UBXN1-217ENST00000534176 TRBV20OR9-2A0A075B6H5 130 aa10.4□□□□□ -0.74
UBXN1-217ENST00000534176 A0A087WX48 190 aa10.4□□□□□ -0.74
UBXN1-217ENST00000534176 IGHV3-30P01768 117 aa10.4□□□□□ -0.74
UBXN1-217ENST00000534176 IGHV3-33P01772 117 aa10.4□□□□□ -0.74
UBXN1-217ENST00000534176 IGHV3-30-3P0DP02 117 aa10.4□□□□□ -0.74
UBXN1-217ENST00000534176 IGHV3-30-5P0DP03 117 aa10.4□□□□□ -0.74
UBXN1-217ENST00000534176 TPPP3Q9BW30 176 aa10.4□□□□□ -0.74
UBXN1-217ENST00000534176 NIT1Q86X76 327 aa10.39□□□□□ -0.75
UBXN1-217ENST00000534176 RPP21Q9H633 154 aaKnown RBP10.39□□□□□ -0.75
UBXN1-217ENST00000534176 TNFRSF18Q9Y5U5 241 aa10.39□□□□□ -0.75
UBXN1-217ENST00000534176 TRBV6-8A0A0A6YYG3 113 aa10.38□□□□□ -0.75
UBXN1-217ENST00000534176 Q0VG73 95 aa10.38□□□□□ -0.75
UBXN1-217ENST00000534176 NEXN-AS1Q8NBZ9 246 aa10.38□□□□□ -0.75
UBXN1-217ENST00000534176 NUDT10Q8NFP7 164 aa10.38□□□□□ -0.75
UBXN1-217ENST00000534176 FRZBQ92765 325 aa10.38□□□□□ -0.75
UBXN1-217ENST00000534176 NUDT11Q96G61 164 aa10.38□□□□□ -0.75
UBXN1-217ENST00000534176 CNFNQ9BYD5 112 aa10.38□□□□□ -0.75
UBXN1-217ENST00000534176 EIF5A2Q9GZV4 153 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms