RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 A0A087WWL8 130 aa12.81□□□□□ -0.36
LRRK1-210ENST00000534045 IBA57-AS1B1ANH7 110 aa12.81□□□□□ -0.36
LRRK1-210ENST00000534045 PRR27Q6MZM9 219 aa12.81□□□□□ -0.36
LRRK1-210ENST00000534045 CDPF1Q6NVV7 123 aa12.81□□□□□ -0.36
LRRK1-210ENST00000534045 SFRP2Q96HF1 295 aa12.81□□□□□ -0.36
LRRK1-210ENST00000534045 Q9HAA7 133 aa12.81□□□□□ -0.36
LRRK1-210ENST00000534045 MANBALQ9NQG1 85 aa12.81□□□□□ -0.36
LRRK1-210ENST00000534045 C14orf178Q8N769 122 aaPredicted RBP12.8□□□□□ -0.36
LRRK1-210ENST00000534045 SCRT2Q9NQ03 307 aa12.79□□□□□ -0.36
LRRK1-210ENST00000534045 URGCP-MRPS24S4R325 110 aa12.79□□□□□ -0.36
LRRK1-210ENST00000534045 UFSP1Q6NVU6 142 aa12.78□□□□□ -0.36
LRRK1-210ENST00000534045 FUSP35637 526 aaKnown RBP eCLIP12.77□□□□□ -0.37
LRRK1-210ENST00000534045 RPL35P42766 123 aaKnown RBP12.77□□□□□ -0.37
LRRK1-210ENST00000534045 RPL36AP83881 106 aaKnown RBP12.77□□□□□ -0.37
LRRK1-210ENST00000534045 RPL19P84098 196 aaKnown RBP12.77□□□□□ -0.37
LRRK1-210ENST00000534045 SPANXN1Q5VSR9 72 aa12.77□□□□□ -0.37
LRRK1-210ENST00000534045 RPL36ALQ969Q0 106 aaKnown RBP12.77□□□□□ -0.37
LRRK1-210ENST00000534045 DAZAP1Q96EP5 407 aaKnown RBP12.77□□□□□ -0.37
LRRK1-210ENST00000534045 TM2D2Q9BX73 214 aa12.77□□□□□ -0.37
LRRK1-210ENST00000534045 IFNA1P01562 189 aa12.76□□□□□ -0.37
LRRK1-210ENST00000534045 SSTP61278 116 aa12.76□□□□□ -0.37
LRRK1-210ENST00000534045 CCL20P78556 96 aa12.76□□□□□ -0.37
LRRK1-210ENST00000534045 TOR2AQ5JU69 321 aa12.76□□□□□ -0.37
LRRK1-210ENST00000534045 KCNIP4Q6PIL6 250 aa12.76□□□□□ -0.37
LRRK1-210ENST00000534045 TCTE3Q8IZS6 198 aa12.76□□□□□ -0.37
LRRK1-210ENST00000534045 MLST8Q9BVC4 326 aa12.76□□□□□ -0.37
LRRK1-210ENST00000534045 TRAV1-1A0A0B4J248 108 aa12.75□□□□□ -0.37
LRRK1-210ENST00000534045 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.75□□□□□ -0.37
LRRK1-210ENST00000534045 Q9UF83 564 aa12.75□□□□□ -0.37
LRRK1-210ENST00000534045 TRAV8-3A0A0A6YYJ7 113 aa12.74□□□□□ -0.37
LRRK1-210ENST00000534045 TRBV10-1A0A0K0K1A3 114 aa12.74□□□□□ -0.37
LRRK1-210ENST00000534045 F5H697 171 aa12.74□□□□□ -0.37
LRRK1-210ENST00000534045 CXCL1P09341 107 aa12.74□□□□□ -0.37
LRRK1-210ENST00000534045 SMIM17P0DL12 118 aa12.74□□□□□ -0.37
LRRK1-210ENST00000534045 SULT1A2P50226 295 aa12.74□□□□□ -0.37
LRRK1-210ENST00000534045 LAGE3Q14657 143 aa12.74□□□□□ -0.37
LRRK1-210ENST00000534045 ZNF56Q15929 161 aa12.74□□□□□ -0.37
LRRK1-210ENST00000534045 LINC00694P0DN24 101 aa12.73□□□□□ -0.37
LRRK1-210ENST00000534045 RAB4BP61018 213 aa12.73□□□□□ -0.37
LRRK1-210ENST00000534045 SLC51BQ86UW2 128 aa12.73□□□□□ -0.37
LRRK1-210ENST00000534045 OR10AG1Q8NH19 301 aa12.73□□□□□ -0.37
LRRK1-210ENST00000534045 TRBV7-3A0A075B6L6 115 aa12.72□□□□□ -0.37
LRRK1-210ENST00000534045 IGLV5-52A0A0A0MRZ9 124 aa12.72□□□□□ -0.37
LRRK1-210ENST00000534045 MUC21A0A0G2JKD1 596 aa12.72□□□□□ -0.37
LRRK1-210ENST00000534045 MUC21A0A140T8X8 626 aa12.72□□□□□ -0.37
LRRK1-210ENST00000534045 PDE6DO43924 150 aa12.72□□□□□ -0.37
LRRK1-210ENST00000534045 GCSHP23434 173 aa12.72□□□□□ -0.37
LRRK1-210ENST00000534045 GNG4P50150 75 aa12.72□□□□□ -0.37
LRRK1-210ENST00000534045 Q8N1X5 172 aa12.72□□□□□ -0.37
LRRK1-210ENST00000534045 DERL1Q9BUN8 251 aa12.72□□□□□ -0.37
LRRK1-210ENST00000534045 MED9Q9NWA0 146 aa12.72□□□□□ -0.37
LRRK1-210ENST00000534045 LRP1BQ9NZR2 4599 aa12.71□□□□□ -0.37
LRRK1-210ENST00000534045 A0A087WX48 190 aa12.71□□□□□ -0.37
LRRK1-210ENST00000534045 C1QBP02746 253 aa12.71□□□□□ -0.37
LRRK1-210ENST00000534045 OR5AL1P0C617 328 aa12.71□□□□□ -0.37
LRRK1-210ENST00000534045 CENPWQ5EE01 88 aa12.71□□□□□ -0.37
LRRK1-210ENST00000534045 DAZ4Q86SG3 579 aaKnown RBP12.71□□□□□ -0.37
LRRK1-210ENST00000534045 C11orf52Q96A22 123 aa12.71□□□□□ -0.37
LRRK1-210ENST00000534045 TPPP3Q9BW30 176 aa12.71□□□□□ -0.37
LRRK1-210ENST00000534045 DAZ3Q9NR90 486 aaKnown RBP12.71□□□□□ -0.37
LRRK1-210ENST00000534045 TMEM262E9PQX1 116 aa12.7□□□□□ -0.38
LRRK1-210ENST00000534045 SNAI2O43623 268 aa12.7□□□□□ -0.38
LRRK1-210ENST00000534045 RPS20P60866 119 aaKnown RBP12.7□□□□□ -0.38
LRRK1-210ENST00000534045 MEF2BQ02080 365 aaPredicted RBP12.7□□□□□ -0.38
LRRK1-210ENST00000534045 ELOBQ15370 118 aa12.7□□□□□ -0.38
LRRK1-210ENST00000534045 RMI2Q96E14 147 aa12.7□□□□□ -0.38
LRRK1-210ENST00000534045 SSBP4Q9BWG4 385 aaPredicted RBP12.7□□□□□ -0.38
LRRK1-210ENST00000534045 KRTAP4-5Q9BYR2 181 aa12.7□□□□□ -0.38
LRRK1-210ENST00000534045 BIN3Q9NQY0 253 aa12.7□□□□□ -0.38
LRRK1-210ENST00000534045 COX11Q9Y6N1 276 aa12.7□□□□□ -0.38
LRRK1-210ENST00000534045 RYR1P21817 5038 aa12.7□□□□□ -0.38
LRRK1-210ENST00000534045 XKRY2A2RUG3 117 aa12.69□□□□□ -0.38
LRRK1-210ENST00000534045 RAB19A4D1S5 217 aa12.69□□□□□ -0.38
LRRK1-210ENST00000534045 Q8N3U1 123 aa12.69□□□□□ -0.38
LRRK1-210ENST00000534045 OR2D3Q8NGH3 330 aa12.69□□□□□ -0.38
LRRK1-210ENST00000534045 NTN5Q8WTR8 489 aaPredicted RBP12.69□□□□□ -0.38
LRRK1-210ENST00000534045 PCLOQ9Y6V0 5065 aa12.69□□□□□ -0.38
LRRK1-210ENST00000534045 TAGLN2P37802 199 aaKnown RBP12.68□□□□□ -0.38
LRRK1-210ENST00000534045 UBE2D3P61077 147 aa12.68□□□□□ -0.38
LRRK1-210ENST00000534045 UBE2D2P62837 147 aa12.68□□□□□ -0.38
LRRK1-210ENST00000534045 AKAP14Q86UN6 197 aa12.68□□□□□ -0.38
LRRK1-210ENST00000534045 NIT1Q86X76 327 aa12.68□□□□□ -0.38
LRRK1-210ENST00000534045 SMIM12Q96EX1 92 aa12.68□□□□□ -0.38
LRRK1-210ENST00000534045 VAX2Q9UIW0 290 aa12.68□□□□□ -0.38
LRRK1-210ENST00000534045 LRCOL1A6NCL2 159 aa12.67□□□□□ -0.38
LRRK1-210ENST00000534045 Q6ZNX1 250 aa12.67□□□□□ -0.38
LRRK1-210ENST00000534045 Q8N814 137 aa12.67□□□□□ -0.38
LRRK1-210ENST00000534045 FER1L6-AS1Q8NA97 138 aa12.67□□□□□ -0.38
LRRK1-210ENST00000534045 AP1S3Q96PC3 154 aa12.67□□□□□ -0.38
LRRK1-210ENST00000534045 KLK12Q9UKR0 248 aa12.67□□□□□ -0.38
LRRK1-210ENST00000534045 P01737 135 aa12.66□□□□□ -0.38
LRRK1-210ENST00000534045 BCL2P10415 239 aa12.66□□□□□ -0.38
LRRK1-210ENST00000534045 KRTAP10-1P60331 282 aa12.66□□□□□ -0.38
LRRK1-210ENST00000534045 OR10G8Q8NGN5 311 aa12.66□□□□□ -0.38
LRRK1-210ENST00000534045 HSPG2P98160 4391 aa12.65□□□□□ -0.38
LRRK1-210ENST00000534045 hCG_2014768A0A024R1R8 64 aa12.65□□□□□ -0.38
LRRK1-210ENST00000534045 GZMBP10144 247 aa12.65□□□□□ -0.38
LRRK1-210ENST00000534045 CHCHD7Q9BUK0 85 aa12.65□□□□□ -0.38
LRRK1-210ENST00000534045 IGKV2D-24A0A075B6R9 120 aa12.64□□□□□ -0.39
LRRK1-210ENST00000534045 RBFOX3A6NFN3 312 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms