RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 KRTAP10-2P60368 255 aa15.03■□□□□ -0
BEST1-207ENST00000533521 OR10J3Q5JRS4 329 aa15.03■□□□□ -0
BEST1-207ENST00000533521 JPT2Q9H910 190 aa15.03■□□□□ -0
BEST1-207ENST00000533521 SSBP4Q9BWG4 385 aaPredicted RBP15.02■□□□□ -0
BEST1-207ENST00000533521 GNG13Q9P2W3 67 aa15.02■□□□□ -0
BEST1-207ENST00000533521 RYR1P21817 5038 aa15.01□□□□□ -0.01
BEST1-207ENST00000533521 TRBV10-1A0A0K0K1A3 114 aa15.01□□□□□ -0.01
BEST1-207ENST00000533521 RPL35P42766 123 aaKnown RBP15.01□□□□□ -0.01
BEST1-207ENST00000533521 CCL20P78556 96 aa15.01□□□□□ -0.01
BEST1-207ENST00000533521 LAGE3Q14657 143 aa15.01□□□□□ -0.01
BEST1-207ENST00000533521 SMIM12Q96EX1 92 aa15.01□□□□□ -0.01
BEST1-207ENST00000533521 A0A087WTM6 91 aa15□□□□□ -0.01
BEST1-207ENST00000533521 TMSB15BA0A087X1C1 80 aa15□□□□□ -0.01
BEST1-207ENST00000533521 SNAI2O43623 268 aa15□□□□□ -0.01
BEST1-207ENST00000533521 OR5AL1P0C617 328 aa15□□□□□ -0.01
BEST1-207ENST00000533521 GAGE12JA6NER3 117 aa14.99□□□□□ -0.01
BEST1-207ENST00000533521 M0R381 172 aa14.99□□□□□ -0.01
BEST1-207ENST00000533521 GAGE1Q13065 139 aa14.99□□□□□ -0.01
BEST1-207ENST00000533521 GAGE4Q13068 117 aa14.99□□□□□ -0.01
BEST1-207ENST00000533521 GAGE5Q13069 117 aa14.99□□□□□ -0.01
BEST1-207ENST00000533521 GAGE13Q4V321 117 aa14.99□□□□□ -0.01
BEST1-207ENST00000533521 C14orf178Q8N769 122 aaPredicted RBP14.99□□□□□ -0.01
BEST1-207ENST00000533521 PDE6DO43924 150 aa14.98□□□□□ -0.01
BEST1-207ENST00000533521 TAGLN2P37802 199 aaKnown RBP14.98□□□□□ -0.01
BEST1-207ENST00000533521 LRP1BQ9NZR2 4599 aa14.97□□□□□ -0.01
BEST1-207ENST00000533521 PCLOQ9Y6V0 5065 aa14.97□□□□□ -0.01
BEST1-207ENST00000533521 IFNA1P01562 189 aa14.97□□□□□ -0.01
BEST1-207ENST00000533521 MEF2BQ02080 365 aaPredicted RBP14.97□□□□□ -0.01
BEST1-207ENST00000533521 FAM74A4Q5TZK3 123 aa14.97□□□□□ -0.01
BEST1-207ENST00000533521 KRTAP17-1Q9BYP8 105 aa14.97□□□□□ -0.01
BEST1-207ENST00000533521 A0A087WWL8 130 aa14.96□□□□□ -0.01
BEST1-207ENST00000533521 Q9UF83 564 aa14.96□□□□□ -0.01
BEST1-207ENST00000533521 RAB4BP61018 213 aa14.95□□□□□ -0.02
BEST1-207ENST00000533521 RPL19P84098 196 aaKnown RBP14.95□□□□□ -0.02
BEST1-207ENST00000533521 OR10G8Q8NGN5 311 aa14.95□□□□□ -0.02
BEST1-207ENST00000533521 OR10AG1Q8NH19 301 aa14.94□□□□□ -0.02
BEST1-207ENST00000533521 DERL1Q9BUN8 251 aa14.94□□□□□ -0.02
BEST1-207ENST00000533521 TRBV7-3A0A075B6L6 115 aa14.93□□□□□ -0.02
BEST1-207ENST00000533521 BCL2P10415 239 aa14.93□□□□□ -0.02
BEST1-207ENST00000533521 NKX2-5P52952 324 aaPredicted RBP14.93□□□□□ -0.02
BEST1-207ENST00000533521 RPS20P60866 119 aaKnown RBP14.93□□□□□ -0.02
BEST1-207ENST00000533521 RPL36AP83881 106 aaKnown RBP14.93□□□□□ -0.02
BEST1-207ENST00000533521 CENPWQ5EE01 88 aa14.93□□□□□ -0.02
BEST1-207ENST00000533521 PRR27Q6MZM9 219 aa14.93□□□□□ -0.02
BEST1-207ENST00000533521 RPL36ALQ969Q0 106 aaKnown RBP14.93□□□□□ -0.02
BEST1-207ENST00000533521 BIN3Q9NQY0 253 aa14.93□□□□□ -0.02
BEST1-207ENST00000533521 VAX2Q9UIW0 290 aa14.93□□□□□ -0.02
BEST1-207ENST00000533521 IGLV2-8P01709 118 aa14.92□□□□□ -0.02
BEST1-207ENST00000533521 TOR2AQ5JU69 321 aa14.92□□□□□ -0.02
BEST1-207ENST00000533521 TM2D2Q9BX73 214 aa14.92□□□□□ -0.02
BEST1-207ENST00000533521 HSPG2P98160 4391 aa14.92□□□□□ -0.02
BEST1-207ENST00000533521 TRAV8-3A0A0A6YYJ7 113 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 C19orf71A6NCJ1 209 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 LRCOL1A6NCL2 159 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 PSCAO43653 123 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 IGHV3-30P01768 117 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 IGHV3-33P01772 117 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 IGHV3-30-3P0DP02 117 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 IGHV3-30-5P0DP03 117 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 GNG4P50150 75 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 UBE2D3P61077 147 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 UBE2D2P62837 147 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 SPANXN1Q5VSR9 72 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 DAZAP1Q96EP5 407 aaKnown RBP14.91□□□□□ -0.02
BEST1-207ENST00000533521 CHCHD7Q9BUK0 85 aa14.91□□□□□ -0.02
BEST1-207ENST00000533521 ALKAL2Q6UX46 152 aa14.9□□□□□ -0.02
BEST1-207ENST00000533521 NTN5Q8WTR8 489 aaPredicted RBP14.89□□□□□ -0.03
BEST1-207ENST00000533521 XKRY2A2RUG3 117 aa14.88□□□□□ -0.03
BEST1-207ENST00000533521 IGLC6P0CF74 106 aa14.88□□□□□ -0.03
BEST1-207ENST00000533521 NIT1Q86X76 327 aa14.88□□□□□ -0.03
BEST1-207ENST00000533521 MED9Q9NWA0 146 aa14.88□□□□□ -0.03
BEST1-207ENST00000533521 KIF25-AS1Q9Y6Z4 181 aa14.88□□□□□ -0.03
BEST1-207ENST00000533521 TRBV20OR9-2A0A075B6H5 130 aa14.87□□□□□ -0.03
BEST1-207ENST00000533521 Q8N1X5 172 aa14.87□□□□□ -0.03
BEST1-207ENST00000533521 MAPKAPK5-AS1Q8N8E1 139 aa14.87□□□□□ -0.03
BEST1-207ENST00000533521 AP1S3Q96PC3 154 aa14.87□□□□□ -0.03
BEST1-207ENST00000533521 COX11Q9Y6N1 276 aa14.87□□□□□ -0.03
BEST1-207ENST00000533521 DNAH5Q8TE73 4624 aa14.87□□□□□ -0.03
BEST1-207ENST00000533521 RAB19A4D1S5 217 aa14.86□□□□□ -0.03
BEST1-207ENST00000533521 F2Z2F3 143 aa14.86□□□□□ -0.03
BEST1-207ENST00000533521 ZNF56Q15929 161 aa14.86□□□□□ -0.03
BEST1-207ENST00000533521 OR2D3Q8NGH3 330 aa14.86□□□□□ -0.03
BEST1-207ENST00000533521 Q9HAA7 133 aa14.86□□□□□ -0.03
BEST1-207ENST00000533521 URGCP-MRPS24S4R325 110 aa14.86□□□□□ -0.03
BEST1-207ENST00000533521 SMIM17P0DL12 118 aa14.85□□□□□ -0.03
BEST1-207ENST00000533521 CACNG7P62955 275 aa14.85□□□□□ -0.03
BEST1-207ENST00000533521 BLOC1S1P78537 153 aa14.85□□□□□ -0.03
BEST1-207ENST00000533521 ELOBQ15370 118 aa14.85□□□□□ -0.03
BEST1-207ENST00000533521 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.85□□□□□ -0.03
BEST1-207ENST00000533521 FER1L6-AS1Q8NA97 138 aa14.85□□□□□ -0.03
BEST1-207ENST00000533521 NEXN-AS1Q8NBZ9 246 aa14.85□□□□□ -0.03
BEST1-207ENST00000533521 LYPD6BQ8NI32 183 aa14.85□□□□□ -0.03
BEST1-207ENST00000533521 P01737 135 aa14.84□□□□□ -0.03
BEST1-207ENST00000533521 TMEM97Q5BJF2 176 aa14.84□□□□□ -0.03
BEST1-207ENST00000533521 WDR73Q6P4I2 378 aa14.84□□□□□ -0.03
BEST1-207ENST00000533521 DAZ4Q86SG3 579 aaKnown RBP14.84□□□□□ -0.03
BEST1-207ENST00000533521 DAZ3Q9NR90 486 aaKnown RBP14.84□□□□□ -0.03
BEST1-207ENST00000533521 APOBP04114 4563 aaKnown RBP14.83□□□□□ -0.03
BEST1-207ENST00000533521 Q8N3U1 123 aa14.83□□□□□ -0.04
BEST1-207ENST00000533521 Q8N814 137 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms