RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 BCL2L11O43521 198 aa10.36□□□□□ -0.75
CPSF1-211ENST00000533492 PFDN1O60925 122 aa10.36□□□□□ -0.75
CPSF1-211ENST00000533492 UFSP1Q6NVU6 142 aa10.36□□□□□ -0.75
CPSF1-211ENST00000533492 C14orf178Q8N769 122 aaPredicted RBP10.36□□□□□ -0.75
CPSF1-211ENST00000533492 A0A087WWC5 75 aa10.35□□□□□ -0.75
CPSF1-211ENST00000533492 A0A087WWL8 130 aa10.35□□□□□ -0.75
CPSF1-211ENST00000533492 H2AFB1P0C5Y9 115 aa10.35□□□□□ -0.75
CPSF1-211ENST00000533492 GCSHP23434 173 aa10.35□□□□□ -0.75
CPSF1-211ENST00000533492 ZFP82Q8N141 532 aa10.35□□□□□ -0.75
CPSF1-211ENST00000533492 SFRP2Q96HF1 295 aa10.35□□□□□ -0.75
CPSF1-211ENST00000533492 TM2D2Q9BX73 214 aa10.35□□□□□ -0.75
CPSF1-211ENST00000533492 Q9UF83 564 aa10.35□□□□□ -0.75
CPSF1-211ENST00000533492 ABCA13Q86UQ4 5058 aa10.35□□□□□ -0.75
CPSF1-211ENST00000533492 APOBP04114 4563 aaKnown RBP10.34□□□□□ -0.75
CPSF1-211ENST00000533492 LINC00694P0DN24 101 aa10.34□□□□□ -0.75
CPSF1-211ENST00000533492 KRTAP10-1P60331 282 aa10.34□□□□□ -0.75
CPSF1-211ENST00000533492 LAGE3Q14657 143 aa10.34□□□□□ -0.75
CPSF1-211ENST00000533492 BAGE2Q86Y30 109 aa10.34□□□□□ -0.75
CPSF1-211ENST00000533492 IGLV5-52A0A0A0MRZ9 124 aa10.33□□□□□ -0.76
CPSF1-211ENST00000533492 SCO2A0A1W2PP80 73 aa10.33□□□□□ -0.76
CPSF1-211ENST00000533492 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
CPSF1-211ENST00000533492 EPM2AB3EWF7 344 aa10.33□□□□□ -0.76
CPSF1-211ENST00000533492 TOR2AQ5JU69 321 aa10.33□□□□□ -0.76
CPSF1-211ENST00000533492 URGCP-MRPS24S4R325 110 aa10.33□□□□□ -0.76
CPSF1-211ENST00000533492 TRAV8-3A0A0A6YYJ7 113 aa10.32□□□□□ -0.76
CPSF1-211ENST00000533492 XGP55808 180 aa10.32□□□□□ -0.76
CPSF1-211ENST00000533492 TMUB2Q71RG4 321 aa10.32□□□□□ -0.76
CPSF1-211ENST00000533492 NTN5Q8WTR8 489 aaPredicted RBP10.32□□□□□ -0.76
CPSF1-211ENST00000533492 RPL36AP83881 106 aaKnown RBP10.31□□□□□ -0.76
CPSF1-211ENST00000533492 DAZ4Q86SG3 579 aaKnown RBP10.31□□□□□ -0.76
CPSF1-211ENST00000533492 Q8N3U1 123 aa10.31□□□□□ -0.76
CPSF1-211ENST00000533492 Q8N814 137 aa10.31□□□□□ -0.76
CPSF1-211ENST00000533492 RPL36ALQ969Q0 106 aaKnown RBP10.31□□□□□ -0.76
CPSF1-211ENST00000533492 DAZ3Q9NR90 486 aaKnown RBP10.31□□□□□ -0.76
CPSF1-211ENST00000533492 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
CPSF1-211ENST00000533492 RPL19P84098 196 aaKnown RBP10.3□□□□□ -0.76
CPSF1-211ENST00000533492 PRR27Q6MZM9 219 aa10.3□□□□□ -0.76
CPSF1-211ENST00000533492 MLST8Q9BVC4 326 aa10.3□□□□□ -0.76
CPSF1-211ENST00000533492 CXCL1P09341 107 aa10.29□□□□□ -0.76
CPSF1-211ENST00000533492 EIF5AL1Q6IS14 154 aaKnown RBP10.29□□□□□ -0.76
CPSF1-211ENST00000533492 KCNIP4Q6PIL6 250 aa10.29□□□□□ -0.76
CPSF1-211ENST00000533492 GNG13Q9P2W3 67 aa10.29□□□□□ -0.76
CPSF1-211ENST00000533492 TRBV7-3A0A075B6L6 115 aa10.28□□□□□ -0.76
CPSF1-211ENST00000533492 A0A087WX48 190 aa10.28□□□□□ -0.76
CPSF1-211ENST00000533492 TEX46H3BTG2 121 aa10.28□□□□□ -0.76
CPSF1-211ENST00000533492 RPL35P42766 123 aaKnown RBP10.28□□□□□ -0.76
CPSF1-211ENST00000533492 RAB4BP61018 213 aa10.28□□□□□ -0.76
CPSF1-211ENST00000533492 ZNF56Q15929 161 aa10.28□□□□□ -0.76
CPSF1-211ENST00000533492 SPANXN1Q5VSR9 72 aa10.28□□□□□ -0.76
CPSF1-211ENST00000533492 OR10AG1Q8NH19 301 aa10.28□□□□□ -0.76
CPSF1-211ENST00000533492 FRZBQ92765 325 aa10.28□□□□□ -0.76
CPSF1-211ENST00000533492 MANBALQ9NQG1 85 aa10.28□□□□□ -0.76
CPSF1-211ENST00000533492 COX11Q9Y6N1 276 aa10.28□□□□□ -0.76
CPSF1-211ENST00000533492 RAB5CP51148 216 aa10.27□□□□□ -0.77
CPSF1-211ENST00000533492 UBE2D3P61077 147 aa10.27□□□□□ -0.77
CPSF1-211ENST00000533492 SSTP61278 116 aa10.27□□□□□ -0.77
CPSF1-211ENST00000533492 UBE2D2P62837 147 aa10.27□□□□□ -0.77
CPSF1-211ENST00000533492 CCL20P78556 96 aa10.27□□□□□ -0.77
CPSF1-211ENST00000533492 NIT1Q86X76 327 aa10.27□□□□□ -0.77
CPSF1-211ENST00000533492 RMI2Q96E14 147 aa10.27□□□□□ -0.77
CPSF1-211ENST00000533492 MUC21A0A0G2JKD1 596 aa10.26□□□□□ -0.77
CPSF1-211ENST00000533492 MUC21A0A140T8X8 626 aa10.26□□□□□ -0.77
CPSF1-211ENST00000533492 F5H697 171 aa10.26□□□□□ -0.77
CPSF1-211ENST00000533492 SNAI2O43623 268 aa10.26□□□□□ -0.77
CPSF1-211ENST00000533492 OR5AL1P0C617 328 aa10.26□□□□□ -0.77
CPSF1-211ENST00000533492 ELOBQ15370 118 aa10.26□□□□□ -0.77
CPSF1-211ENST00000533492 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.26□□□□□ -0.77
CPSF1-211ENST00000533492 SSBP4Q9BWG4 385 aaPredicted RBP10.26□□□□□ -0.77
CPSF1-211ENST00000533492 KLK12Q9UKR0 248 aa10.26□□□□□ -0.77
CPSF1-211ENST00000533492 TRAV1-1A0A0B4J248 108 aa10.25□□□□□ -0.77
CPSF1-211ENST00000533492 TMEM262E9PQX1 116 aa10.25□□□□□ -0.77
CPSF1-211ENST00000533492 LECT2O14960 151 aa10.25□□□□□ -0.77
CPSF1-211ENST00000533492 SMR3BP02814 79 aaPredicted RBP10.25□□□□□ -0.77
CPSF1-211ENST00000533492 SMIM17P0DL12 118 aa10.25□□□□□ -0.77
CPSF1-211ENST00000533492 Q5VSD8 79 aa10.25□□□□□ -0.77
CPSF1-211ENST00000533492 OR10G8Q8NGN5 311 aa10.25□□□□□ -0.77
CPSF1-211ENST00000533492 DAZAP1Q96EP5 407 aaKnown RBP10.25□□□□□ -0.77
CPSF1-211ENST00000533492 TMEM70Q9BUB7 260 aa10.25□□□□□ -0.77
CPSF1-211ENST00000533492 CHCHD7Q9BUK0 85 aa10.25□□□□□ -0.77
CPSF1-211ENST00000533492 IGKV2D-24A0A075B6R9 120 aa10.24□□□□□ -0.77
CPSF1-211ENST00000533492 C11orf52Q96A22 123 aa10.24□□□□□ -0.77
CPSF1-211ENST00000533492 DERL1Q9BUN8 251 aa10.24□□□□□ -0.77
CPSF1-211ENST00000533492 INAFM2P0DMQ5 153 aa10.23□□□□□ -0.77
CPSF1-211ENST00000533492 WFDC2Q14508 124 aa10.23□□□□□ -0.77
CPSF1-211ENST00000533492 CENPWQ5EE01 88 aa10.23□□□□□ -0.77
CPSF1-211ENST00000533492 NEXN-AS1Q8NBZ9 246 aa10.23□□□□□ -0.77
CPSF1-211ENST00000533492 BAALCQ8WXS3 180 aa10.23□□□□□ -0.77
CPSF1-211ENST00000533492 UBE2WQ96B02 151 aa10.23□□□□□ -0.77
CPSF1-211ENST00000533492 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.22□□□□□ -0.77
CPSF1-211ENST00000533492 TRBV6-8A0A0A6YYG3 113 aa10.22□□□□□ -0.77
CPSF1-211ENST00000533492 FAM229AH3BQW9 127 aa10.22□□□□□ -0.77
CPSF1-211ENST00000533492 IFNA1P01562 189 aa10.22□□□□□ -0.77
CPSF1-211ENST00000533492 SULT1A2P50226 295 aa10.22□□□□□ -0.77
CPSF1-211ENST00000533492 HAMPP81172 84 aa10.22□□□□□ -0.77
CPSF1-211ENST00000533492 TPPP3Q9BW30 176 aa10.22□□□□□ -0.77
CPSF1-211ENST00000533492 RBFOX3A6NFN3 312 aa10.21□□□□□ -0.77
CPSF1-211ENST00000533492 PDE6DO43924 150 aa10.21□□□□□ -0.77
CPSF1-211ENST00000533492 GNG4P50150 75 aa10.21□□□□□ -0.77
CPSF1-211ENST00000533492 RPS20P60866 119 aaKnown RBP10.21□□□□□ -0.77
CPSF1-211ENST00000533492 Q0VG73 95 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms