RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 OR2D3Q8NGH3 330 aa7.78□□□□□ -1.16
CLCF1-202ENST00000533438 KCNS1Q96KK3 526 aa7.78□□□□□ -1.16
CLCF1-202ENST00000533438 CTDSP1Q9GZU7 261 aa7.78□□□□□ -1.16
CLCF1-202ENST00000533438 TMEM242Q9NWH2 141 aa7.78□□□□□ -1.16
CLCF1-202ENST00000533438 LRP1BQ9NZR2 4599 aa7.78□□□□□ -1.16
CLCF1-202ENST00000533438 XKRY2A2RUG3 117 aa7.77□□□□□ -1.17
CLCF1-202ENST00000533438 C16orf90A8MZG2 172 aa7.77□□□□□ -1.17
CLCF1-202ENST00000533438 BTF3P20290 206 aaKnown RBP7.77□□□□□ -1.17
CLCF1-202ENST00000533438 RPL19P84098 196 aaKnown RBP7.77□□□□□ -1.17
CLCF1-202ENST00000533438 MUC21Q5SSG8 566 aa7.77□□□□□ -1.17
CLCF1-202ENST00000533438 DNLZQ5SXM8 178 aa7.77□□□□□ -1.17
CLCF1-202ENST00000533438 RPS10P5Q9NQ39 176 aa7.77□□□□□ -1.17
CLCF1-202ENST00000533438 MRPL16Q9NX20 251 aaKnown RBP7.77□□□□□ -1.17
CLCF1-202ENST00000533438 NAGKQ9UJ70 344 aa7.77□□□□□ -1.17
CLCF1-202ENST00000533438 FAM231BA6NCW3 169 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 A8MWL6 223 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 PAX4O43316 350 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 TYMSP04818 313 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 ZNF415Q09FC8 603 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 FHL2Q14192 279 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 ATRAIDQ6UW56 229 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 TSKUQ8WUA8 353 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 GFRA4Q9GZZ7 299 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 MDFICQ9P1T7 246 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 PRO0255Q9UI72 69 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 ICOSQ9Y6W8 199 aa7.76□□□□□ -1.17
CLCF1-202ENST00000533438 APOBP04114 4563 aaKnown RBP7.75□□□□□ -1.17
CLCF1-202ENST00000533438 TRGV11A0A075B6L2 103 aa7.75□□□□□ -1.17
CLCF1-202ENST00000533438 IGHV3-53P01767 116 aa7.75□□□□□ -1.17
CLCF1-202ENST00000533438 CRYBA4P53673 196 aa7.75□□□□□ -1.17
CLCF1-202ENST00000533438 FOXA3P55318 350 aaPredicted RBP7.75□□□□□ -1.17
CLCF1-202ENST00000533438 SLAQ13239 276 aa7.75□□□□□ -1.17
CLCF1-202ENST00000533438 IMMP2LQ96T52 175 aa7.75□□□□□ -1.17
CLCF1-202ENST00000533438 IL36BQ9NZH7 164 aa7.75□□□□□ -1.17
CLCF1-202ENST00000533438 TMSB15BA0A087X1C1 80 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 IGHV3-16A0A0C4DH30 117 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 SMIM27A0A1W2PRY6 76 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 SIVA1O15304 175 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 GNRH2O43555 120 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 IGLC6P0CF74 106 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 ASIPP42127 132 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 Q6ZRN7 208 aaPredicted RBP7.74□□□□□ -1.17
CLCF1-202ENST00000533438 SPATA12Q7Z6I5 190 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 GTSF1Q8WW33 167 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 RASL10AQ92737 203 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 SSBP4Q9BWG4 385 aaPredicted RBP7.74□□□□□ -1.17
CLCF1-202ENST00000533438 HHLA3Q9XRX5 114 aa7.74□□□□□ -1.17
CLCF1-202ENST00000533438 GRIFINA4D1Z8 144 aa7.73□□□□□ -1.17
CLCF1-202ENST00000533438 SNAI2O43623 268 aa7.73□□□□□ -1.17
CLCF1-202ENST00000533438 OR5AL1P0C617 328 aa7.73□□□□□ -1.17
CLCF1-202ENST00000533438 GZMBP10144 247 aa7.73□□□□□ -1.17
CLCF1-202ENST00000533438 RNASE3P12724 160 aaKnown RBP7.73□□□□□ -1.17
CLCF1-202ENST00000533438 LINC00315P59091 139 aa7.73□□□□□ -1.17
CLCF1-202ENST00000533438 MRPL23Q16540 153 aaKnown RBP7.73□□□□□ -1.17
CLCF1-202ENST00000533438 Q8N1X5 172 aa7.73□□□□□ -1.17
CLCF1-202ENST00000533438 FER1L6-AS1Q8NA97 138 aa7.73□□□□□ -1.17
CLCF1-202ENST00000533438 C9orf85Q96MD7 179 aa7.73□□□□□ -1.17
CLCF1-202ENST00000533438 SPXQ9BT56 116 aa7.73□□□□□ -1.17
CLCF1-202ENST00000533438 SCRT2Q9NQ03 307 aa7.73□□□□□ -1.17
CLCF1-202ENST00000533438 DNAH5Q8TE73 4624 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 HIGD1CA8MV81 97 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 F2Z2F3 143 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 NXPH4O95158 308 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 S100A4P26447 101 aaKnown RBP7.72□□□□□ -1.17
CLCF1-202ENST00000533438 CTRLP40313 264 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 KRTAP10-2P60368 255 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 LYPD5Q6UWN5 251 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 NEGR1Q7Z3B1 354 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 ZNF479Q96JC4 524 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 CNFNQ9BYD5 112 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 NAT8BQ9UHF3 227 aa7.72□□□□□ -1.17
CLCF1-202ENST00000533438 TRAV9-1A0A075B6T8 112 aa7.71□□□□□ -1.18
CLCF1-202ENST00000533438 TRGV4A0A0C4DH28 118 aa7.71□□□□□ -1.18
CLCF1-202ENST00000533438 H3BVH4 76 aa7.71□□□□□ -1.18
CLCF1-202ENST00000533438 K7EQD1 137 aa7.71□□□□□ -1.18
CLCF1-202ENST00000533438 ARMS2P0C7Q2 107 aa7.71□□□□□ -1.18
CLCF1-202ENST00000533438 S100PP25815 95 aa7.71□□□□□ -1.18
CLCF1-202ENST00000533438 WDR73Q6P4I2 378 aa7.71□□□□□ -1.18
CLCF1-202ENST00000533438 KCNIP4Q6PIL6 250 aa7.71□□□□□ -1.18
CLCF1-202ENST00000533438 NUP35Q8NFH5 326 aa7.71□□□□□ -1.18
CLCF1-202ENST00000533438 SMCO4Q9NRQ5 59 aa7.71□□□□□ -1.18
CLCF1-202ENST00000533438 TRAV4A0A0B4J268 109 aa7.7□□□□□ -1.18
CLCF1-202ENST00000533438 LYZL1Q6UWQ5 148 aa7.7□□□□□ -1.18
CLCF1-202ENST00000533438 PTH2Q96A98 100 aa7.7□□□□□ -1.18
CLCF1-202ENST00000533438 YPEL4Q96NS1 127 aa7.7□□□□□ -1.18
CLCF1-202ENST00000533438 M0R2P5 195 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 SRIP30626 198 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 CACNG7P62955 275 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 PIK3CD-AS1Q5SR53 167 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 CBLN2Q8IUK8 224 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 MAPKAPK5-AS1Q8N8E1 139 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 BTF3L4Q96K17 158 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 PGLYRP4Q96LB8 373 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 TPPP3Q9BW30 176 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 PHLDA3Q9Y5J5 127 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 URGCP-MRPS24S4R325 110 aa7.69□□□□□ -1.18
CLCF1-202ENST00000533438 A0A1B0GUT8 65 aa7.68□□□□□ -1.18
CLCF1-202ENST00000533438 SCO1O75880 301 aa7.68□□□□□ -1.18
CLCF1-202ENST00000533438 GYPEP15421 78 aa7.68□□□□□ -1.18
CLCF1-202ENST00000533438 ELOBQ15370 118 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms