RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 RHODO00212 210 aa8.28□□□□□ -1.08
SSBP3-214ENST00000533209 GATCO43716 136 aaKnown RBP8.28□□□□□ -1.08
SSBP3-214ENST00000533209 FAM74A4Q5TZK3 123 aa8.28□□□□□ -1.08
SSBP3-214ENST00000533209 LYZL1Q6UWQ5 148 aa8.28□□□□□ -1.08
SSBP3-214ENST00000533209 TPPP3Q9BW30 176 aa8.28□□□□□ -1.08
SSBP3-214ENST00000533209 KMT2AQ03164 3969 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 A0A1W2PPQ1 181 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 F2Z2F3 143 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 SRIP30626 198 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 CTRLP40313 264 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 ERVFC1-1P60608 527 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 SSTP61278 116 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 RPL23P62829 140 aaKnown RBP8.27□□□□□ -1.09
SSBP3-214ENST00000533209 RHOHQ15669 191 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 SOHLH1Q5JUK2 328 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 NEGR1Q7Z3B1 354 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 ZNRF2Q8NHG8 242 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 ISOC2Q96AB3 205 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 PRADC1Q9BSG0 188 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 OSTCQ9NRP0 149 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 MSRB1Q9NZV6 116 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 NAT8Q9UHE5 227 aa8.27□□□□□ -1.09
SSBP3-214ENST00000533209 DNAH6Q9C0G6 4158 aa8.26□□□□□ -1.09
SSBP3-214ENST00000533209 CACNG7P62955 275 aa8.26□□□□□ -1.09
SSBP3-214ENST00000533209 CT83Q5H943 113 aa8.26□□□□□ -1.09
SSBP3-214ENST00000533209 LYPD5Q6UWN5 251 aa8.26□□□□□ -1.09
SSBP3-214ENST00000533209 C14orf178Q8N769 122 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-214ENST00000533209 GTSF1Q8WW33 167 aa8.26□□□□□ -1.09
SSBP3-214ENST00000533209 Q9UF83 564 aa8.26□□□□□ -1.09
SSBP3-214ENST00000533209 MRPS16Q9Y3D3 137 aaKnown RBP8.26□□□□□ -1.09
SSBP3-214ENST00000533209 A8MWL6 223 aa8.25□□□□□ -1.09
SSBP3-214ENST00000533209 ADIRFQ15847 76 aa8.25□□□□□ -1.09
SSBP3-214ENST00000533209 WDR73Q6P4I2 378 aa8.25□□□□□ -1.09
SSBP3-214ENST00000533209 AP1S3Q96PC3 154 aa8.25□□□□□ -1.09
SSBP3-214ENST00000533209 UPK3BQ9BT76 320 aa8.25□□□□□ -1.09
SSBP3-214ENST00000533209 CNFNQ9BYD5 112 aa8.25□□□□□ -1.09
SSBP3-214ENST00000533209 KIF25-AS1Q9Y6Z4 181 aa8.25□□□□□ -1.09
SSBP3-214ENST00000533209 IGLV2-18A0A075B6J9 118 aa8.24□□□□□ -1.09
SSBP3-214ENST00000533209 LINC00694P0DN24 101 aa8.24□□□□□ -1.09
SSBP3-214ENST00000533209 NTF3P20783 257 aa8.24□□□□□ -1.09
SSBP3-214ENST00000533209 LINC00315P59091 139 aa8.24□□□□□ -1.09
SSBP3-214ENST00000533209 SH2D6Q7Z4S9 175 aa8.24□□□□□ -1.09
SSBP3-214ENST00000533209 V9GYV3 84 aa8.24□□□□□ -1.09
SSBP3-214ENST00000533209 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 M0R2N4 97 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 FOXA3P55318 350 aaPredicted RBP8.23□□□□□ -1.09
SSBP3-214ENST00000533209 RAB4BP61018 213 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 GAGE1Q13065 139 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 GAGE4Q13068 117 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 GAGE5Q13069 117 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 Q6ZR54 194 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 C15orf54Q8N8G6 183 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 TSKUQ8WUA8 353 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 Q9H8V8 135 aa8.23□□□□□ -1.09
SSBP3-214ENST00000533209 FAM231BA6NCW3 169 aa8.22□□□□□ -1.09
SSBP3-214ENST00000533209 EVI2AP22794 236 aa8.22□□□□□ -1.09
SSBP3-214ENST00000533209 TIRAPP58753 221 aa8.22□□□□□ -1.09
SSBP3-214ENST00000533209 ZNF56Q15929 161 aa8.22□□□□□ -1.09
SSBP3-214ENST00000533209 OR10G8Q8NGN5 311 aa8.22□□□□□ -1.09
SSBP3-214ENST00000533209 ATP6V0E2Q8NHE4 81 aa8.22□□□□□ -1.09
SSBP3-214ENST00000533209 PGLYRP4Q96LB8 373 aa8.22□□□□□ -1.09
SSBP3-214ENST00000533209 GFRA4Q9GZZ7 299 aa8.22□□□□□ -1.09
SSBP3-214ENST00000533209 DNAH10Q8IVF4 4471 aa8.21□□□□□ -1.09
SSBP3-214ENST00000533209 TRBV10-1A0A0K0K1A3 114 aa8.21□□□□□ -1.1
SSBP3-214ENST00000533209 NBDYA0A0U1RRE5 68 aa8.21□□□□□ -1.1
SSBP3-214ENST00000533209 HIGD1CA8MV81 97 aa8.21□□□□□ -1.1
SSBP3-214ENST00000533209 TRGC1P0CF51 173 aa8.21□□□□□ -1.1
SSBP3-214ENST00000533209 SMIM17P0DL12 118 aa8.21□□□□□ -1.1
SSBP3-214ENST00000533209 TWIST1Q15672 202 aa8.21□□□□□ -1.1
SSBP3-214ENST00000533209 UQCC3Q6UW78 93 aa8.21□□□□□ -1.1
SSBP3-214ENST00000533209 F5H697 171 aa8.2□□□□□ -1.1
SSBP3-214ENST00000533209 MGPP08493 103 aa8.2□□□□□ -1.1
SSBP3-214ENST00000533209 NEXN-AS1Q8NBZ9 246 aa8.2□□□□□ -1.1
SSBP3-214ENST00000533209 GTSF1LQ9H1H1 148 aa8.2□□□□□ -1.1
SSBP3-214ENST00000533209 DPH3P1Q9H4G8 78 aa8.2□□□□□ -1.1
SSBP3-214ENST00000533209 DNAH2Q9P225 4427 aa8.19□□□□□ -1.1
SSBP3-214ENST00000533209 A0A1B0GUT8 65 aa8.19□□□□□ -1.1
SSBP3-214ENST00000533209 SIVA1O15304 175 aa8.19□□□□□ -1.1
SSBP3-214ENST00000533209 RPL36AP83881 106 aaKnown RBP8.19□□□□□ -1.1
SSBP3-214ENST00000533209 SUMO4Q6EEV6 95 aa8.19□□□□□ -1.1
SSBP3-214ENST00000533209 COMMD7Q86VX2 200 aa8.19□□□□□ -1.1
SSBP3-214ENST00000533209 WFDC10BQ8IUB3 73 aa8.19□□□□□ -1.1
SSBP3-214ENST00000533209 NUP35Q8NFH5 326 aa8.19□□□□□ -1.1
SSBP3-214ENST00000533209 RPL36ALQ969Q0 106 aaKnown RBP8.19□□□□□ -1.1
SSBP3-214ENST00000533209 SMIM27A0A1W2PRY6 76 aa8.18□□□□□ -1.1
SSBP3-214ENST00000533209 TMEM218A2RU14 115 aa8.18□□□□□ -1.1
SSBP3-214ENST00000533209 LINC00862A6NCI5 91 aa8.18□□□□□ -1.1
SSBP3-214ENST00000533209 M0QY20 66 aa8.18□□□□□ -1.1
SSBP3-214ENST00000533209 ADCYAP1P18509 176 aa8.18□□□□□ -1.1
SSBP3-214ENST00000533209 UBE2D3P61077 147 aa8.18□□□□□ -1.1
SSBP3-214ENST00000533209 UBE2D2P62837 147 aa8.18□□□□□ -1.1
SSBP3-214ENST00000533209 PNRC1Q12796 327 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-214ENST00000533209 KRTAP1-5Q9BYS1 174 aa8.18□□□□□ -1.1
SSBP3-214ENST00000533209 TRBV7-3A0A075B6L6 115 aa8.17□□□□□ -1.1
SSBP3-214ENST00000533209 LELP1Q5T871 98 aa8.17□□□□□ -1.1
SSBP3-214ENST00000533209 BORCS7Q96B45 105 aa8.17□□□□□ -1.1
SSBP3-214ENST00000533209 NAT8BQ9UHF3 227 aa8.17□□□□□ -1.1
SSBP3-214ENST00000533209 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
SSBP3-214ENST00000533209 SMIM15Q7Z3B0 74 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms