RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 H2AFB1P0C5Y9 115 aa15.73■□□□□ 0.11
SMPD1-209ENST00000533196 IGHV3-30P01768 117 aa15.72■□□□□ 0.11
SMPD1-209ENST00000533196 IGHV3-33P01772 117 aa15.72■□□□□ 0.11
SMPD1-209ENST00000533196 CXCL1P09341 107 aa15.72■□□□□ 0.11
SMPD1-209ENST00000533196 IGHV3-30-3P0DP02 117 aa15.72■□□□□ 0.11
SMPD1-209ENST00000533196 IGHV3-30-5P0DP03 117 aa15.72■□□□□ 0.11
SMPD1-209ENST00000533196 C14orf178Q8N769 122 aaPredicted RBP15.72■□□□□ 0.11
SMPD1-209ENST00000533196 TMSB15BA0A087X1C1 80 aa15.71■□□□□ 0.11
SMPD1-209ENST00000533196 FAM74A4Q5TZK3 123 aa15.71■□□□□ 0.11
SMPD1-209ENST00000533196 NTN5Q8WTR8 489 aaPredicted RBP15.71■□□□□ 0.11
SMPD1-209ENST00000533196 SCO2A0A1W2PP80 73 aa15.7■□□□□ 0.1
SMPD1-209ENST00000533196 LRCOL1A6NCL2 159 aa15.7■□□□□ 0.1
SMPD1-209ENST00000533196 TMUB2Q71RG4 321 aa15.7■□□□□ 0.1
SMPD1-209ENST00000533196 BAGE2Q86Y30 109 aa15.7■□□□□ 0.1
SMPD1-209ENST00000533196 MLST8Q9BVC4 326 aa15.7■□□□□ 0.1
SMPD1-209ENST00000533196 TM2D2Q9BX73 214 aa15.7■□□□□ 0.1
SMPD1-209ENST00000533196 TRBV10-1A0A0K0K1A3 114 aa15.69■□□□□ 0.1
SMPD1-209ENST00000533196 A0A1B0GV50 99 aa15.69■□□□□ 0.1
SMPD1-209ENST00000533196 M0R381 172 aa15.69■□□□□ 0.1
SMPD1-209ENST00000533196 TOR2AQ5JU69 321 aa15.69■□□□□ 0.1
SMPD1-209ENST00000533196 Q9HAA7 133 aa15.69■□□□□ 0.1
SMPD1-209ENST00000533196 FUSP35637 526 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMPD1-209ENST00000533196 RAB5CP51148 216 aa15.68■□□□□ 0.1
SMPD1-209ENST00000533196 A0A087WWL8 130 aa15.67■□□□□ 0.1
SMPD1-209ENST00000533196 TRAV8-3A0A0A6YYJ7 113 aa15.67■□□□□ 0.1
SMPD1-209ENST00000533196 GCSHP23434 173 aa15.67■□□□□ 0.1
SMPD1-209ENST00000533196 EIF5AL1Q6IS14 154 aaKnown RBP15.67■□□□□ 0.1
SMPD1-209ENST00000533196 MANBALQ9NQG1 85 aa15.67■□□□□ 0.1
SMPD1-209ENST00000533196 Q9UF83 564 aa15.67■□□□□ 0.1
SMPD1-209ENST00000533196 TRAV1-1A0A0B4J248 108 aa15.66■□□□□ 0.1
SMPD1-209ENST00000533196 KRTAP10-1P60331 282 aa15.66■□□□□ 0.1
SMPD1-209ENST00000533196 RPL36AP83881 106 aaKnown RBP15.65■□□□□ 0.1
SMPD1-209ENST00000533196 RPL36ALQ969Q0 106 aaKnown RBP15.65■□□□□ 0.1
SMPD1-209ENST00000533196 SSBP4Q9BWG4 385 aaPredicted RBP15.65■□□□□ 0.1
SMPD1-209ENST00000533196 IGLV5-52A0A0A0MRZ9 124 aa15.64■□□□□ 0.09
SMPD1-209ENST00000533196 TEX46H3BTG2 121 aa15.64■□□□□ 0.09
SMPD1-209ENST00000533196 SNAI2O43623 268 aa15.64■□□□□ 0.09
SMPD1-209ENST00000533196 XGP55808 180 aa15.64■□□□□ 0.09
SMPD1-209ENST00000533196 Q8N814 137 aa15.64■□□□□ 0.09
SMPD1-209ENST00000533196 C11orf52Q96A22 123 aa15.64■□□□□ 0.09
SMPD1-209ENST00000533196 OR5AL1P0C617 328 aa15.63■□□□□ 0.09
SMPD1-209ENST00000533196 OR10G8Q8NGN5 311 aa15.63■□□□□ 0.09
SMPD1-209ENST00000533196 CHCHD7Q9BUK0 85 aa15.63■□□□□ 0.09
SMPD1-209ENST00000533196 COX11Q9Y6N1 276 aa15.63■□□□□ 0.09
SMPD1-209ENST00000533196 URGCP-MRPS24S4R325 110 aa15.63■□□□□ 0.09
SMPD1-209ENST00000533196 TRBV7-3A0A075B6L6 115 aa15.62■□□□□ 0.09
SMPD1-209ENST00000533196 RPL35P42766 123 aaKnown RBP15.62■□□□□ 0.09
SMPD1-209ENST00000533196 RAB4BP61018 213 aa15.62■□□□□ 0.09
SMPD1-209ENST00000533196 RPL19P84098 196 aaKnown RBP15.62■□□□□ 0.09
SMPD1-209ENST00000533196 EPM2AB3EWF7 344 aa15.61■□□□□ 0.09
SMPD1-209ENST00000533196 UBE2D3P61077 147 aa15.61■□□□□ 0.09
SMPD1-209ENST00000533196 UBE2D2P62837 147 aa15.61■□□□□ 0.09
SMPD1-209ENST00000533196 DAZ4Q86SG3 579 aaKnown RBP15.61■□□□□ 0.09
SMPD1-209ENST00000533196 NIT1Q86X76 327 aa15.61■□□□□ 0.09
SMPD1-209ENST00000533196 Q8N3U1 123 aa15.61■□□□□ 0.09
SMPD1-209ENST00000533196 OR10AG1Q8NH19 301 aa15.61■□□□□ 0.09
SMPD1-209ENST00000533196 DAZ3Q9NR90 486 aaKnown RBP15.61■□□□□ 0.09
SMPD1-209ENST00000533196 GNG13Q9P2W3 67 aa15.61■□□□□ 0.09
SMPD1-209ENST00000533196 CCL20P78556 96 aa15.6■□□□□ 0.09
SMPD1-209ENST00000533196 PRR27Q6MZM9 219 aa15.6■□□□□ 0.09
SMPD1-209ENST00000533196 TCTE3Q8IZS6 198 aa15.6■□□□□ 0.09
SMPD1-209ENST00000533196 RMI2Q96E14 147 aa15.6■□□□□ 0.09
SMPD1-209ENST00000533196 SULT1A2P50226 295 aa15.59■□□□□ 0.09
SMPD1-209ENST00000533196 SPANXN1Q5VSR9 72 aa15.59■□□□□ 0.09
SMPD1-209ENST00000533196 TMEM70Q9BUB7 260 aa15.59■□□□□ 0.09
SMPD1-209ENST00000533196 FAT1Q14517 4588 aa15.59■□□□□ 0.09
SMPD1-209ENST00000533196 ELOBQ15370 118 aa15.58■□□□□ 0.08
SMPD1-209ENST00000533196 SMIM12Q96EX1 92 aa15.58■□□□□ 0.08
SMPD1-209ENST00000533196 ZNF56Q15929 161 aa15.57■□□□□ 0.08
SMPD1-209ENST00000533196 KCNIP4Q6PIL6 250 aa15.57■□□□□ 0.08
SMPD1-209ENST00000533196 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.57■□□□□ 0.08
SMPD1-209ENST00000533196 A0A087WX48 190 aa15.56■□□□□ 0.08
SMPD1-209ENST00000533196 DERL1Q9BUN8 251 aa15.56■□□□□ 0.08
SMPD1-209ENST00000533196 PDE6DO43924 150 aa15.55■□□□□ 0.08
SMPD1-209ENST00000533196 IFNA1P01562 189 aa15.55■□□□□ 0.08
SMPD1-209ENST00000533196 C1QBP02746 253 aa15.55■□□□□ 0.08
SMPD1-209ENST00000533196 RPS20P60866 119 aaKnown RBP15.55■□□□□ 0.08
SMPD1-209ENST00000533196 MEF2BQ02080 365 aaPredicted RBP15.55■□□□□ 0.08
SMPD1-209ENST00000533196 CENPWQ5EE01 88 aa15.55■□□□□ 0.08
SMPD1-209ENST00000533196 SLC51BQ86UW2 128 aa15.55■□□□□ 0.08
SMPD1-209ENST00000533196 NEXN-AS1Q8NBZ9 246 aa15.55■□□□□ 0.08
SMPD1-209ENST00000533196 FRZBQ92765 325 aa15.55■□□□□ 0.08
SMPD1-209ENST00000533196 DNAH8Q96JB1 4490 aa15.55■□□□□ 0.08
SMPD1-209ENST00000533196 DAZAP1Q96EP5 407 aaKnown RBP15.54■□□□□ 0.08
SMPD1-209ENST00000533196 AP1S3Q96PC3 154 aa15.54■□□□□ 0.08
SMPD1-209ENST00000533196 TRBV6-8A0A0A6YYG3 113 aa15.53■□□□□ 0.08
SMPD1-209ENST00000533196 SMIM17P0DL12 118 aa15.53■□□□□ 0.08
SMPD1-209ENST00000533196 F5H697 171 aa15.52■□□□□ 0.08
SMPD1-209ENST00000533196 IGLV2-8P01709 118 aa15.52■□□□□ 0.08
SMPD1-209ENST00000533196 TAGLN2P37802 199 aaKnown RBP15.52■□□□□ 0.08
SMPD1-209ENST00000533196 PKIAP61925 76 aa15.52■□□□□ 0.08
SMPD1-209ENST00000533196 Q0VG73 95 aa15.52■□□□□ 0.08
SMPD1-209ENST00000533196 TMEM97Q5BJF2 176 aa15.52■□□□□ 0.08
SMPD1-209ENST00000533196 BIN3Q9NQY0 253 aa15.52■□□□□ 0.08
SMPD1-209ENST00000533196 KLK12Q9UKR0 248 aa15.52■□□□□ 0.08
SMPD1-209ENST00000533196 RBFOX3A6NFN3 312 aa15.51■□□□□ 0.07
SMPD1-209ENST00000533196 IGLC6P0CF74 106 aa15.51■□□□□ 0.07
SMPD1-209ENST00000533196 GNG4P50150 75 aa15.51■□□□□ 0.07
SMPD1-209ENST00000533196 WFDC2Q14508 124 aa15.51■□□□□ 0.07
SMPD1-209ENST00000533196 KIF25-AS1Q9Y6Z4 181 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms