RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MUC21A0A140T8X8 626 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 CBY3A6NI87 242 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 ARMS2P0C7Q2 107 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 HTN1P15515 57 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 RAB5AP20339 215 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 S100A4P26447 101 aaKnown RBP7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 SSTP61278 116 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 DNLZQ5SXM8 178 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 MRPL54Q6P161 138 aaKnown RBP7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 TMEM256Q8N2U0 113 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 C6orf223Q8N319 242 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 CSNK1G2-AS1Q8NCQ2 148 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 LINC00467Q9BRT7 94 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 SSBP4Q9BWG4 385 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 GOLT1BQ9Y3E0 138 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 TIMM8BQ9Y5J9 83 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 TRGV11A0A075B6L2 103 aa7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 IGHV3-16A0A0C4DH30 117 aa7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 A0A1B0GUT8 65 aa7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 F2Z2F3 143 aa7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 H3BVH4 76 aa7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 RNASE3P12724 160 aaKnown RBP7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 CTRLP40313 264 aa7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 SMCPP49901 116 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 RIGQ13278 110 aa7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 BORCS7Q96B45 105 aa7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 C18orf15Q96N68 181 aa7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 MDFICQ9P1T7 246 aa7.97□□□□□ -1.13
TRAPPC4-213ENST00000533149 SNAI2O43623 268 aa7.96□□□□□ -1.14
TRAPPC4-213ENST00000533149 OR5AL1P0C617 328 aa7.96□□□□□ -1.14
TRAPPC4-213ENST00000533149 AZU1P20160 251 aa7.96□□□□□ -1.14
TRAPPC4-213ENST00000533149 RPS10P46783 165 aaKnown RBP7.96□□□□□ -1.14
TRAPPC4-213ENST00000533149 WDR73Q6P4I2 378 aa7.96□□□□□ -1.14
TRAPPC4-213ENST00000533149 LRP1BQ9NZR2 4599 aa7.95□□□□□ -1.14
TRAPPC4-213ENST00000533149 A0A1B0GXF2 115 aa7.95□□□□□ -1.14
TRAPPC4-213ENST00000533149 SPART-AS1P0CW21 52 aa7.95□□□□□ -1.14
TRAPPC4-213ENST00000533149 NTF3P20783 257 aa7.95□□□□□ -1.14
TRAPPC4-213ENST00000533149 CAMPP49913 170 aa7.95□□□□□ -1.14
TRAPPC4-213ENST00000533149 ATP5L2Q7Z4Y8 100 aa7.95□□□□□ -1.14
TRAPPC4-213ENST00000533149 NBDYA0A0U1RRE5 68 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 RAB4BP61018 213 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 CACNG7P62955 275 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 HBBP68871 147 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 TWIST1Q15672 202 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 COX19Q49B96 90 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 SPANXN1Q5VSR9 72 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 RASL11AQ6T310 242 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 ZNF705AQ6ZN79 300 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 OR10AG1Q8NH19 301 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 C9orf85Q96MD7 179 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 CNFNQ9BYD5 112 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 MSRB1Q9NZV6 116 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 PHLDA3Q9Y5J5 127 aa7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
TRAPPC4-213ENST00000533149 A0A1B0GW15 77 aa7.93□□□□□ -1.14
TRAPPC4-213ENST00000533149 S100A8P05109 93 aa7.93□□□□□ -1.14
TRAPPC4-213ENST00000533149 ZNF415Q09FC8 603 aa7.93□□□□□ -1.14
TRAPPC4-213ENST00000533149 TMEM136Q6ZRR5 245 aa7.93□□□□□ -1.14
TRAPPC4-213ENST00000533149 FRZBQ92765 325 aa7.93□□□□□ -1.14
TRAPPC4-213ENST00000533149 GNB1LQ9BYB4 327 aa7.93□□□□□ -1.14
TRAPPC4-213ENST00000533149 GSN-AS1Q9NRJ2 163 aa7.93□□□□□ -1.14
TRAPPC4-213ENST00000533149 TEX48A0A1B0GUV7 120 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 SNURFLB1AK76 121 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 J3QL48 77 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 M0R381 172 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 TRGC2P03986 189 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 RRN3P1Q2M238 152 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 Q5VSD8 79 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 C11orf72Q8NBR9 251 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 SPXQ9BT56 116 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 TRAPPC1Q9Y5R8 145 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 UBR4Q5T4S7 5183 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 NACAE9PAV3 2078 aa7.92□□□□□ -1.14
TRAPPC4-213ENST00000533149 FABP9Q0Z7S8 132 aa7.91□□□□□ -1.14
TRAPPC4-213ENST00000533149 ZNF493Q6ZR52 646 aa7.91□□□□□ -1.14
TRAPPC4-213ENST00000533149 ZFP82Q8N141 532 aa7.91□□□□□ -1.14
TRAPPC4-213ENST00000533149 GATD1Q8NB37 220 aa7.91□□□□□ -1.14
TRAPPC4-213ENST00000533149 MRPL18Q9H0U6 180 aaKnown RBP7.91□□□□□ -1.14
TRAPPC4-213ENST00000533149 SMIM9A6NGZ8 99 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 M0R2P5 195 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 NXPH4O95158 308 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 HLA-DQA1P01909 254 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 APCSP02743 223 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 MT-ND6P03923 174 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 KRTAP10-2P60368 255 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 C15orf53Q8NAA6 179 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 SYT8Q8NBV8 401 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 RNASE8Q8TDE3 154 aaKnown RBP7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 TMEM263Q8WUH6 116 aaKnown RBP7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 PTH2Q96A98 100 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 C16orf74Q96GX8 76 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 TMEM191AQ9H0A3 160 aa7.9□□□□□ -1.14
TRAPPC4-213ENST00000533149 C1orf196B1AJZ1 125 aa7.89□□□□□ -1.15
TRAPPC4-213ENST00000533149 PHOX2AO14813 284 aa7.89□□□□□ -1.15
TRAPPC4-213ENST00000533149 EVI2AP22794 236 aa7.89□□□□□ -1.15
TRAPPC4-213ENST00000533149 ZNF876PQ49A33 203 aa7.89□□□□□ -1.15
TRAPPC4-213ENST00000533149 SMIM15Q7Z3B0 74 aa7.89□□□□□ -1.15
TRAPPC4-213ENST00000533149 JPT2Q9H910 190 aa7.89□□□□□ -1.15
TRAPPC4-213ENST00000533149 PLAC8L1A1L4L8 177 aa7.88□□□□□ -1.15
TRAPPC4-213ENST00000533149 TRGC1P0CF51 173 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms