RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 LINC00694P0DN24 101 aa20.48■□□□□ 0.87
SSSCA1-207ENST00000533115 KRTAP10-2P60368 255 aa20.48■□□□□ 0.87
SSSCA1-207ENST00000533115 RPL19P84098 196 aaKnown RBP20.48■□□□□ 0.87
SSSCA1-207ENST00000533115 LINC01556Q5JQF7 62 aa20.48■□□□□ 0.87
SSSCA1-207ENST00000533115 FAM74A4Q5TZK3 123 aa20.48■□□□□ 0.87
SSSCA1-207ENST00000533115 AKAP14Q86UN6 197 aa20.48■□□□□ 0.87
SSSCA1-207ENST00000533115 C14orf178Q8N769 122 aaPredicted RBP20.48■□□□□ 0.87
SSSCA1-207ENST00000533115 CXCL1P09341 107 aa20.47■□□□□ 0.87
SSSCA1-207ENST00000533115 PRR27Q6MZM9 219 aa20.47■□□□□ 0.87
SSSCA1-207ENST00000533115 DERL1Q9BUN8 251 aa20.47■□□□□ 0.87
SSSCA1-207ENST00000533115 A0A087WWL8 130 aa20.46■□□□□ 0.87
SSSCA1-207ENST00000533115 Q9UF83 564 aa20.46■□□□□ 0.87
SSSCA1-207ENST00000533115 hCG_2014768A0A024R1R8 64 aa20.45■□□□□ 0.86
SSSCA1-207ENST00000533115 ERVFC1-1P60608 527 aa20.44■□□□□ 0.86
SSSCA1-207ENST00000533115 DNAH5Q8TE73 4624 aa20.44■□□□□ 0.86
SSSCA1-207ENST00000533115 IFNA1P01562 189 aa20.43■□□□□ 0.86
SSSCA1-207ENST00000533115 EREGO14944 169 aa20.42■□□□□ 0.86
SSSCA1-207ENST00000533115 MEF2BQ02080 365 aaPredicted RBP20.42■□□□□ 0.86
SSSCA1-207ENST00000533115 C9orf62Q8N4C0 152 aa20.42■□□□□ 0.86
SSSCA1-207ENST00000533115 CENPWQ5EE01 88 aa20.41■□□□□ 0.86
SSSCA1-207ENST00000533115 OR10AG1Q8NH19 301 aa20.41■□□□□ 0.86
SSSCA1-207ENST00000533115 SNAI2O43623 268 aa20.4■□□□□ 0.86
SSSCA1-207ENST00000533115 PDE6DO43924 150 aa20.4■□□□□ 0.86
SSSCA1-207ENST00000533115 SSBP4Q9BWG4 385 aaPredicted RBP20.4■□□□□ 0.86
SSSCA1-207ENST00000533115 IBA57-AS1B1ANH7 110 aa20.39■□□□□ 0.85
SSSCA1-207ENST00000533115 CDK2AP2O75956 126 aa20.39■□□□□ 0.85
SSSCA1-207ENST00000533115 IGHV3-30P01768 117 aa20.39■□□□□ 0.85
SSSCA1-207ENST00000533115 IGHV3-33P01772 117 aa20.39■□□□□ 0.85
SSSCA1-207ENST00000533115 IGHV3-30-3P0DP02 117 aa20.39■□□□□ 0.85
SSSCA1-207ENST00000533115 IGHV3-30-5P0DP03 117 aa20.39■□□□□ 0.85
SSSCA1-207ENST00000533115 IGLV2-8P01709 118 aa20.38■□□□□ 0.85
SSSCA1-207ENST00000533115 OR5AL1P0C617 328 aa20.38■□□□□ 0.85
SSSCA1-207ENST00000533115 BCL2P10415 239 aa20.38■□□□□ 0.85
SSSCA1-207ENST00000533115 HSPG2P98160 4391 aa20.37■□□□□ 0.85
SSSCA1-207ENST00000533115 A0A087WTM6 91 aa20.37■□□□□ 0.85
SSSCA1-207ENST00000533115 RAB19A4D1S5 217 aa20.37■□□□□ 0.85
SSSCA1-207ENST00000533115 A0A087WWC5 75 aa20.36■□□□□ 0.85
SSSCA1-207ENST00000533115 GNG4P50150 75 aa20.36■□□□□ 0.85
SSSCA1-207ENST00000533115 SMIM12Q96EX1 92 aa20.36■□□□□ 0.85
SSSCA1-207ENST00000533115 MED9Q9NWA0 146 aa20.36■□□□□ 0.85
SSSCA1-207ENST00000533115 PGPEP1Q9NXJ5 209 aa20.36■□□□□ 0.85
SSSCA1-207ENST00000533115 VAX2Q9UIW0 290 aa20.36■□□□□ 0.85
SSSCA1-207ENST00000533115 PCLOQ9Y6V0 5065 aa20.36■□□□□ 0.85
SSSCA1-207ENST00000533115 TRBV10-1A0A0K0K1A3 114 aa20.35■□□□□ 0.85
SSSCA1-207ENST00000533115 SPANXN1Q5VSR9 72 aa20.35■□□□□ 0.85
SSSCA1-207ENST00000533115 MUC21A0A0G2JKD1 596 aa20.34■□□□□ 0.85
SSSCA1-207ENST00000533115 MUC21A0A140T8X8 626 aa20.34■□□□□ 0.85
SSSCA1-207ENST00000533115 DAZAP1Q96EP5 407 aaKnown RBP20.34■□□□□ 0.85
SSSCA1-207ENST00000533115 TAGLN2P37802 199 aaKnown RBP20.33■□□□□ 0.85
SSSCA1-207ENST00000533115 RAB4BP61018 213 aa20.33■□□□□ 0.85
SSSCA1-207ENST00000533115 C19orf71A6NCJ1 209 aa20.32■□□□□ 0.84
SSSCA1-207ENST00000533115 RPL36AP83881 106 aaKnown RBP20.32■□□□□ 0.84
SSSCA1-207ENST00000533115 RPL36ALQ969Q0 106 aaKnown RBP20.32■□□□□ 0.84
SSSCA1-207ENST00000533115 Q9HAA7 133 aa20.32■□□□□ 0.84
SSSCA1-207ENST00000533115 APOBP04114 4563 aaKnown RBP20.32■□□□□ 0.84
SSSCA1-207ENST00000533115 PSCAO43653 123 aa20.31■□□□□ 0.84
SSSCA1-207ENST00000533115 ZNF56Q15929 161 aa20.31■□□□□ 0.84
SSSCA1-207ENST00000533115 Q8N3U1 123 aa20.31■□□□□ 0.84
SSSCA1-207ENST00000533115 KRTAP17-1Q9BYP8 105 aa20.31■□□□□ 0.84
SSSCA1-207ENST00000533115 TRBV20OR9-2A0A075B6H5 130 aa20.3■□□□□ 0.84
SSSCA1-207ENST00000533115 FUSP35637 526 aaKnown RBP eCLIP20.3■□□□□ 0.84
SSSCA1-207ENST00000533115 RPS20P60866 119 aaKnown RBP20.3■□□□□ 0.84
SSSCA1-207ENST00000533115 SSTP61278 116 aa20.3■□□□□ 0.84
SSSCA1-207ENST00000533115 LAGE3Q14657 143 aa20.3■□□□□ 0.84
SSSCA1-207ENST00000533115 CDPF1Q6NVV7 123 aa20.3■□□□□ 0.84
SSSCA1-207ENST00000533115 OR2D3Q8NGH3 330 aa20.3■□□□□ 0.84
SSSCA1-207ENST00000533115 TRBV7-3A0A075B6L6 115 aa20.29■□□□□ 0.84
SSSCA1-207ENST00000533115 GZMBP10144 247 aa20.29■□□□□ 0.84
SSSCA1-207ENST00000533115 UBE2D3P61077 147 aa20.29■□□□□ 0.84
SSSCA1-207ENST00000533115 UBE2D2P62837 147 aa20.29■□□□□ 0.84
SSSCA1-207ENST00000533115 ALKAL2Q6UX46 152 aa20.29■□□□□ 0.84
SSSCA1-207ENST00000533115 OR10G8Q8NGN5 311 aa20.28■□□□□ 0.84
SSSCA1-207ENST00000533115 BIN3Q9NQY0 253 aa20.28■□□□□ 0.84
SSSCA1-207ENST00000533115 IGLC6P0CF74 106 aa20.27■□□□□ 0.84
SSSCA1-207ENST00000533115 BLOC1S1P78537 153 aa20.27■□□□□ 0.84
SSSCA1-207ENST00000533115 FER1L6-AS1Q8NA97 138 aa20.27■□□□□ 0.84
SSSCA1-207ENST00000533115 P01737 135 aa20.26■□□□□ 0.83
SSSCA1-207ENST00000533115 TPPP3Q9BW30 176 aa20.26■□□□□ 0.83
SSSCA1-207ENST00000533115 RBFOX3A6NFN3 312 aa20.25■□□□□ 0.83
SSSCA1-207ENST00000533115 DAZ4Q86SG3 579 aaKnown RBP20.25■□□□□ 0.83
SSSCA1-207ENST00000533115 NEXN-AS1Q8NBZ9 246 aa20.25■□□□□ 0.83
SSSCA1-207ENST00000533115 AP1S3Q96PC3 154 aa20.25■□□□□ 0.83
SSSCA1-207ENST00000533115 DAZ3Q9NR90 486 aaKnown RBP20.25■□□□□ 0.83
SSSCA1-207ENST00000533115 KIF25-AS1Q9Y6Z4 181 aa20.25■□□□□ 0.83
SSSCA1-207ENST00000533115 XKRY2A2RUG3 117 aa20.24■□□□□ 0.83
SSSCA1-207ENST00000533115 LRCOL1A6NCL2 159 aa20.24■□□□□ 0.83
SSSCA1-207ENST00000533115 F5H697 171 aa20.24■□□□□ 0.83
SSSCA1-207ENST00000533115 SMIM17P0DL12 118 aa20.24■□□□□ 0.83
SSSCA1-207ENST00000533115 NIT1Q86X76 327 aa20.23■□□□□ 0.83
SSSCA1-207ENST00000533115 URGCP-MRPS24S4R325 110 aa20.23■□□□□ 0.83
SSSCA1-207ENST00000533115 TOR2AQ5JU69 321 aa20.22■□□□□ 0.83
SSSCA1-207ENST00000533115 MAPKAPK5-AS1Q8N8E1 139 aa20.22■□□□□ 0.83
SSSCA1-207ENST00000533115 TM2D2Q9BX73 214 aa20.22■□□□□ 0.83
SSSCA1-207ENST00000533115 TRAV8-3A0A0A6YYJ7 113 aa20.21■□□□□ 0.83
SSSCA1-207ENST00000533115 CACNG7P62955 275 aa20.21■□□□□ 0.83
SSSCA1-207ENST00000533115 LYPD6BQ8NI32 183 aa20.21■□□□□ 0.83
SSSCA1-207ENST00000533115 ABCA13Q86UQ4 5058 aa20.2■□□□□ 0.82
SSSCA1-207ENST00000533115 A0A1B0GVG6 124 aa20.2■□□□□ 0.82
SSSCA1-207ENST00000533115 NKX2-5P52952 324 aaPredicted RBP20.2■□□□□ 0.82
SSSCA1-207ENST00000533115 F2Z2F3 143 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms