RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
LTBP3-221ENST00000532932 TRPT1Q86TN4 253 aaKnown RBP11.17□□□□□ -0.62
LTBP3-221ENST00000532932 CDSNQ15517 529 aa11.17□□□□□ -0.62
LTBP3-221ENST00000532932 GPHB5Q86YW7 130 aa11.17□□□□□ -0.62
LTBP3-221ENST00000532932 C10orf126Q8N4M7 172 aa11.17□□□□□ -0.62
LTBP3-221ENST00000532932 OPRPNQ99935 248 aaPredicted RBP11.17□□□□□ -0.62
LTBP3-221ENST00000532932 PRO1854Q9UHT4 67 aa11.17□□□□□ -0.62
LTBP3-221ENST00000532932 BSNQ9UPA5 3926 aa11.16□□□□□ -0.62
LTBP3-221ENST00000532932 IGHV3-30P01768 117 aa11.15□□□□□ -0.62
LTBP3-221ENST00000532932 IGHV3-30-5P0DP03 117 aa11.15□□□□□ -0.62
LTBP3-221ENST00000532932 RNASE3P12724 160 aaKnown RBP11.15□□□□□ -0.62
LTBP3-221ENST00000532932 TRBV20-1A0A075B6N2 111 aa11.15□□□□□ -0.62
LTBP3-221ENST00000532932 CRIP2P52943 208 aaPredicted RBP11.15□□□□□ -0.62
LTBP3-221ENST00000532932 ITLN2Q8WWU7 325 aaPredicted RBP11.15□□□□□ -0.62
LTBP3-221ENST00000532932 A4D1N5 150 aa11.15□□□□□ -0.62
LTBP3-221ENST00000532932 J3QQQ9 107 aa11.15□□□□□ -0.62
LTBP3-221ENST00000532932 OVOL1O14753 267 aa11.15□□□□□ -0.62
LTBP3-221ENST00000532932 U3KQE9 123 aa11.15□□□□□ -0.62
LTBP3-221ENST00000532932 SLC25A20O43772 301 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 PAPPA-AS1Q5QFB9 102 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 SUMO4Q6EEV6 95 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 ZFAND6Q6FIF0 208 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 TEX29Q8N6K0 151 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 ZNRF2Q8NHG8 242 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 SS18L2Q9UHA2 77 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 TRAV41A0A0B4J266 112 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 SDHAF1A6NFY7 115 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 PPP1R17O96001 155 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 IGHV4-39P01824 125 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 LENEPQ9Y5L5 61 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 HIVEP3Q5T1R4 2406 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 SLC25A29Q8N8R3 303 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 UBTD1Q9HAC8 227 aa11.14□□□□□ -0.63
LTBP3-221ENST00000532932 IGKV3-20P01619 116 aa11.13□□□□□ -0.63
LTBP3-221ENST00000532932 FAM159AQ6UWV7 190 aa11.13□□□□□ -0.63
LTBP3-221ENST00000532932 CENPVL3A0A0U1RRI6 287 aa11.13□□□□□ -0.63
LTBP3-221ENST00000532932 IGIPA6NJ69 53 aa11.13□□□□□ -0.63
LTBP3-221ENST00000532932 MUC4Q99102 2169 aa11.13□□□□□ -0.63
LTBP3-221ENST00000532932 VCYO14598 125 aa11.12□□□□□ -0.63
LTBP3-221ENST00000532932 PKD1L2Q7Z442 2459 aa11.12□□□□□ -0.63
LTBP3-221ENST00000532932 UBE2E1P51965 193 aa11.12□□□□□ -0.63
LTBP3-221ENST00000532932 ERG28Q9UKR5 140 aa11.12□□□□□ -0.63
LTBP3-221ENST00000532932 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
LTBP3-221ENST00000532932 ADARB2-AS1A8MUL3 147 aa11.11□□□□□ -0.63
LTBP3-221ENST00000532932 ZNF56Q15929 161 aa11.11□□□□□ -0.63
LTBP3-221ENST00000532932 SORL1Q92673 2214 aa11.11□□□□□ -0.63
LTBP3-221ENST00000532932 LY6EQ16553 131 aa11.11□□□□□ -0.63
LTBP3-221ENST00000532932 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
LTBP3-221ENST00000532932 IGHV1-69DA0A0B4J2H0 117 aa11.11□□□□□ -0.63
LTBP3-221ENST00000532932 MUSTN1Q8IVN3 82 aa11.1□□□□□ -0.63
LTBP3-221ENST00000532932 C5orf56Q8N8D9 126 aa11.1□□□□□ -0.63
LTBP3-221ENST00000532932 VCX2Q9H322 139 aa11.1□□□□□ -0.63
LTBP3-221ENST00000532932 B5MCH6 92 aa11.1□□□□□ -0.63
LTBP3-221ENST00000532932 TMEM262E9PQX1 116 aa11.1□□□□□ -0.63
LTBP3-221ENST00000532932 AJUBAQ96IF1 538 aa11.1□□□□□ -0.63
LTBP3-221ENST00000532932 PRSS2P07478 247 aa11.09□□□□□ -0.63
LTBP3-221ENST00000532932 PF4V1P10720 104 aa11.09□□□□□ -0.63
LTBP3-221ENST00000532932 POLR2KP53803 58 aaKnown RBP11.09□□□□□ -0.63
LTBP3-221ENST00000532932 TMEM141Q96I45 108 aa11.09□□□□□ -0.63
LTBP3-221ENST00000532932 NPFFO15130 113 aa11.09□□□□□ -0.63
LTBP3-221ENST00000532932 LINC00315P59091 139 aa11.09□□□□□ -0.63
LTBP3-221ENST00000532932 MAP1AP78559 2803 aaPredicted RBP11.09□□□□□ -0.63
LTBP3-221ENST00000532932 SNCGO76070 127 aa11.09□□□□□ -0.63
LTBP3-221ENST00000532932 BRD3OSQ6XYD6 125 aa11.09□□□□□ -0.63
LTBP3-221ENST00000532932 RHPN1-AS1Q9BWJ2 59 aa11.09□□□□□ -0.63
LTBP3-221ENST00000532932 FAM208BQ5VWN6 2430 aa11.08□□□□□ -0.63
LTBP3-221ENST00000532932 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.08□□□□□ -0.641e-7■■□□□ 13.8
LTBP3-221ENST00000532932 CREBBPQ92793 2442 aa11.08□□□□□ -0.64
LTBP3-221ENST00000532932 ZNF580Q9UK33 172 aa11.08□□□□□ -0.64
LTBP3-221ENST00000532932 KIF25-AS1Q9Y6Z4 181 aa11.08□□□□□ -0.64
LTBP3-221ENST00000532932 IGHV3-33P01772 117 aa11.08□□□□□ -0.64
LTBP3-221ENST00000532932 GAGE2BQ13066 116 aa11.08□□□□□ -0.64
LTBP3-221ENST00000532932 ZNF876PQ49A33 203 aa11.08□□□□□ -0.64
LTBP3-221ENST00000532932 GAGE2EQ4V326 116 aa11.08□□□□□ -0.64
LTBP3-221ENST00000532932 GAGE2DQ9UEU5 116 aa11.08□□□□□ -0.64
LTBP3-221ENST00000532932 C11orf71Q6IPW1 123 aa11.07□□□□□ -0.64
LTBP3-221ENST00000532932 HRNRQ86YZ3 2850 aaPredicted RBP11.07□□□□□ -0.64
LTBP3-221ENST00000532932 A0A0J9YXV3 536 aa11.07□□□□□ -0.64
LTBP3-221ENST00000532932 ELANEP08246 267 aa11.07□□□□□ -0.64
LTBP3-221ENST00000532932 EDN2P20800 178 aa11.07□□□□□ -0.64
LTBP3-221ENST00000532932 NPC2P61916 151 aa11.07□□□□□ -0.64
LTBP3-221ENST00000532932 TIMM17AQ99595 171 aa11.07□□□□□ -0.64
LTBP3-221ENST00000532932 TRAV12-2A0A075B6T6 113 aa11.07□□□□□ -0.64
LTBP3-221ENST00000532932 SOCS3O14543 225 aa11.07□□□□□ -0.64
LTBP3-221ENST00000532932 UCNP55089 124 aa11.07□□□□□ -0.64
LTBP3-221ENST00000532932 EIF4EBP3O60516 100 aaPredicted RBP11.06□□□□□ -0.64
LTBP3-221ENST00000532932 KLRB1Q12918 225 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 SBSPONQ8IVN8 264 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 FAM223BA6NKX1 122 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 MED14OSP0DP75 135 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 FAM223AQ8IWN6 122 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 AMELXQ99217 191 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 BPESC1Q9GZL8 116 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 NDUFA4O00483 81 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 CRLF1O75462 422 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 SPXQ9BT56 116 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 MOB4Q9Y3A3 225 aa11.06□□□□□ -0.64
LTBP3-221ENST00000532932 IGHV4OR15-8A0A075B7B6 117 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms