RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	MED14OS	P0DP75	135 aa		11.88	□□□□□ -0.51
CTSB-223	ENST00000532370	GZMB	P10144	247 aa		11.88	□□□□□ -0.51
CTSB-223	ENST00000532370	SST	P61278	116 aa		11.88	□□□□□ -0.51
CTSB-223	ENST00000532370		A0A1W2PPQ1	181 aa		11.87	□□□□□ -0.51
CTSB-223	ENST00000532370	C19orf71	A6NCJ1	209 aa		11.87	□□□□□ -0.51
CTSB-223	ENST00000532370	CXCL1	P09341	107 aa		11.87	□□□□□ -0.51
CTSB-223	ENST00000532370	TNP2	Q05952	138 aa		11.87	□□□□□ -0.51
CTSB-223	ENST00000532370	SH2D6	Q7Z4S9	175 aa		11.87	□□□□□ -0.51
CTSB-223	ENST00000532370	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.87	□□□□□ -0.51
CTSB-223	ENST00000532370	GAGE12J	A6NER3	117 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	TMEM250	H0YL14	139 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	SNAI2	O43623	268 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	GAGE1	Q13065	139 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	GAGE4	Q13068	117 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	GAGE5	Q13069	117 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	GAGE13	Q4V321	117 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	TOR2A	Q5JU69	321 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	OR2D3	Q8NGH3	330 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	DAZAP1	Q96EP5	407 aa	Known RBP	11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	SMIM12	Q96EX1	92 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	KIAA1109	Q2LD37	5005 aa		11.86	□□□□□ -0.51
CTSB-223	ENST00000532370	RHOD	O00212	210 aa		11.85	□□□□□ -0.51
CTSB-223	ENST00000532370	OR5AL1	P0C617	328 aa		11.85	□□□□□ -0.51
CTSB-223	ENST00000532370	TIRAP	P58753	221 aa		11.85	□□□□□ -0.51
CTSB-223	ENST00000532370	RAB14	P61106	215 aa		11.85	□□□□□ -0.51
CTSB-223	ENST00000532370	CLLU1	Q5K131	121 aa		11.85	□□□□□ -0.51
CTSB-223	ENST00000532370	TNFRSF18	Q9Y5U5	241 aa		11.85	□□□□□ -0.51
CTSB-223	ENST00000532370	HERC2	O95714	4834 aa		11.84	□□□□□ -0.51
CTSB-223	ENST00000532370		K7EN84	100 aa		11.84	□□□□□ -0.51
CTSB-223	ENST00000532370	LINC00694	P0DN24	101 aa		11.84	□□□□□ -0.51
CTSB-223	ENST00000532370	LINC00315	P59091	139 aa		11.84	□□□□□ -0.51
CTSB-223	ENST00000532370	ATP6V0E2	Q8NHE4	81 aa		11.84	□□□□□ -0.51
CTSB-223	ENST00000532370	OCC1	Q8TAD7	63 aa		11.84	□□□□□ -0.51
CTSB-223	ENST00000532370	TPPP3	Q9BW30	176 aa		11.84	□□□□□ -0.51
CTSB-223	ENST00000532370	LY96	Q9Y6Y9	160 aa		11.84	□□□□□ -0.51
CTSB-223	ENST00000532370		P01737	135 aa		11.83	□□□□□ -0.52
CTSB-223	ENST00000532370	CEBPG	P53567	150 aa		11.83	□□□□□ -0.52
CTSB-223	ENST00000532370	SPANXN1	Q5VSR9	72 aa		11.83	□□□□□ -0.52
CTSB-223	ENST00000532370	EIF5A2	Q9GZV4	153 aa	Known RBP	11.83	□□□□□ -0.52
CTSB-223	ENST00000532370	GTSF1L	Q9H1H1	148 aa		11.83	□□□□□ -0.52
CTSB-223	ENST00000532370	SMDT1	Q9H4I9	107 aa		11.83	□□□□□ -0.52
CTSB-223	ENST00000532370	IGLC6	P0CF74	106 aa		11.82	□□□□□ -0.52
CTSB-223	ENST00000532370	DNAH10OS	P0CZ25	163 aa		11.82	□□□□□ -0.52
CTSB-223	ENST00000532370	NUDT10	Q8NFP7	164 aa		11.82	□□□□□ -0.52
CTSB-223	ENST00000532370	NUDT11	Q96G61	164 aa		11.82	□□□□□ -0.52
CTSB-223	ENST00000532370	LRP1B	Q9NZR2	4599 aa		11.82	□□□□□ -0.52
CTSB-223	ENST00000532370	SRP19	P09132	144 aa	Known RBP	11.81	□□□□□ -0.52
CTSB-223	ENST00000532370	RPS20	P60866	119 aa	Known RBP	11.81	□□□□□ -0.52
CTSB-223	ENST00000532370	OR10J3	Q5JRS4	329 aa		11.81	□□□□□ -0.52
CTSB-223	ENST00000532370	FER1L6-AS1	Q8NA97	138 aa		11.81	□□□□□ -0.52
CTSB-223	ENST00000532370	RNASE7	Q9H1E1	156 aa	Known RBP	11.81	□□□□□ -0.52
CTSB-223	ENST00000532370	MSRB1	Q9NZV6	116 aa		11.81	□□□□□ -0.52
CTSB-223	ENST00000532370	DNAH5	Q8TE73	4624 aa		11.8	□□□□□ -0.52
CTSB-223	ENST00000532370	LELP1	Q5T871	98 aa		11.8	□□□□□ -0.52
CTSB-223	ENST00000532370		Q6ZRN7	208 aa	Predicted RBP	11.8	□□□□□ -0.52
CTSB-223	ENST00000532370	BIN3	Q9NQY0	253 aa		11.8	□□□□□ -0.52
CTSB-223	ENST00000532370	TRAV9-2	A0A087WT02	112 aa		11.79	□□□□□ -0.52
CTSB-223	ENST00000532370	TRAV8-6	A0A0B4J262	113 aa		11.79	□□□□□ -0.52
CTSB-223	ENST00000532370	IGHV3-38	A0A0C4DH36	116 aa		11.79	□□□□□ -0.52
CTSB-223	ENST00000532370	EVI2A	P22794	236 aa		11.79	□□□□□ -0.52
CTSB-223	ENST00000532370	PEA15	Q15121	130 aa		11.79	□□□□□ -0.52
CTSB-223	ENST00000532370	KIF25-AS1	Q9Y6Z4	181 aa		11.79	□□□□□ -0.52
CTSB-223	ENST00000532370		C9JQL5	133 aa		11.78	□□□□□ -0.52
CTSB-223	ENST00000532370	BTF3	P20290	206 aa	Known RBP	11.78	□□□□□ -0.52
CTSB-223	ENST00000532370	RAB4B	P61018	213 aa		11.78	□□□□□ -0.52
CTSB-223	ENST00000532370	SRSF3	P84103	164 aa	Known RBP	11.78	□□□□□ -0.52
CTSB-223	ENST00000532370	ZNF56	Q15929	161 aa		11.78	□□□□□ -0.52
CTSB-223	ENST00000532370	LYZL1	Q6UWQ5	148 aa		11.78	□□□□□ -0.52
CTSB-223	ENST00000532370		Q8N3U1	123 aa		11.78	□□□□□ -0.52
CTSB-223	ENST00000532370	XKRY2	A2RUG3	117 aa		11.77	□□□□□ -0.53
CTSB-223	ENST00000532370	LINC01556	Q5JQF7	62 aa		11.77	□□□□□ -0.53
CTSB-223	ENST00000532370	RPP21	Q9H633	154 aa	Known RBP	11.77	□□□□□ -0.53
CTSB-223	ENST00000532370	RYR1	P21817	5038 aa		11.77	□□□□□ -0.53
CTSB-223	ENST00000532370	TRBV10-1	A0A0K0K1A3	114 aa		11.76	□□□□□ -0.53
CTSB-223	ENST00000532370		F5H697	171 aa		11.76	□□□□□ -0.53
CTSB-223	ENST00000532370	IGHV3-30	P01768	117 aa		11.76	□□□□□ -0.53
CTSB-223	ENST00000532370	IGHV3-33	P01772	117 aa		11.76	□□□□□ -0.53
CTSB-223	ENST00000532370	IGHV3-30-3	P0DP02	117 aa		11.76	□□□□□ -0.53
CTSB-223	ENST00000532370	IGHV3-30-5	P0DP03	117 aa		11.76	□□□□□ -0.53
CTSB-223	ENST00000532370	AP1S3	Q96PC3	154 aa		11.76	□□□□□ -0.53
CTSB-223	ENST00000532370		F2Z2F3	143 aa		11.75	□□□□□ -0.53
CTSB-223	ENST00000532370	SMIM17	P0DL12	118 aa		11.75	□□□□□ -0.53
CTSB-223	ENST00000532370	UBE2D3	P61077	147 aa		11.75	□□□□□ -0.53
CTSB-223	ENST00000532370	UBE2D2	P62837	147 aa		11.75	□□□□□ -0.53
CTSB-223	ENST00000532370	CACNG7	P62955	275 aa		11.75	□□□□□ -0.53
CTSB-223	ENST00000532370	NEXN-AS1	Q8NBZ9	246 aa		11.75	□□□□□ -0.53
CTSB-223	ENST00000532370	SMIM7	Q9BQ49	75 aa		11.75	□□□□□ -0.53
CTSB-223	ENST00000532370	TRBV7-3	A0A075B6L6	115 aa		11.74	□□□□□ -0.53
CTSB-223	ENST00000532370		K7EP13	123 aa		11.74	□□□□□ -0.53
CTSB-223	ENST00000532370	NTF3	P20783	257 aa		11.74	□□□□□ -0.53
CTSB-223	ENST00000532370	RPL36A	P83881	106 aa	Known RBP	11.74	□□□□□ -0.53
CTSB-223	ENST00000532370	FAM74A3	Q4VXF1	159 aa		11.74	□□□□□ -0.53
CTSB-223	ENST00000532370	OR10G8	Q8NGN5	311 aa		11.74	□□□□□ -0.53
CTSB-223	ENST00000532370	GTSF1	Q8WW33	167 aa		11.74	□□□□□ -0.53
CTSB-223	ENST00000532370	RPL36AL	Q969Q0	106 aa	Known RBP	11.74	□□□□□ -0.53
CTSB-223	ENST00000532370	ZNF727	A8MUV8	499 aa		11.73	□□□□□ -0.53
CTSB-223	ENST00000532370	MGP	P08493	103 aa		11.73	□□□□□ -0.53
CTSB-223	ENST00000532370	CTRL	P40313	264 aa		11.73	□□□□□ -0.53
CTSB-223	ENST00000532370	C10orf126	Q8N4M7	172 aa		11.73	□□□□□ -0.53
CTSB-223	ENST00000532370		A0A087WWC5	75 aa		11.72	□□□□□ -0.53

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